Poecilia reticulata (guppy): 103474062
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Entry
103474062 CDS
T05149
Symbol
skp2
Name
(RefSeq) S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04068
FoxO signaling pathway
pret04110
Cell cycle
pret04120
Ubiquitin mediated proteolysis
pret04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103474062 (skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
103474062 (skp2)
04150 mTOR signaling pathway
103474062 (skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103474062 (skp2)
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103474062 (skp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_NXF1-5
LRR_R13L1-DRL21
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
103474062
NCBI-ProteinID:
XP_008423009
LinkDB
All DBs
Position
LG12:25521253..25528080
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AA seq
401 aa
AA seq
DB search
MSEDSLPLQQLSSQKRFGTKRKSLGSESTPTDLVLLRSPRPKQPWPACLGKENQEARFVL
ARRSRRRRRSGSGVSWDQLPDELLLRICGCLPLPDLLRASAVCRRWRRLALDESLWVSVD
LEGLTQTGPALRLVLRTGVQRLRCPRAFVEEPDLSEPGRLQLVDLDLSGSVVSPSALRSV
VCRCSRLRRLSLEALPLSDDVLSCLAQNPDLLQLNLGGCSGFSAAALAAMLDSCRRLEQL
NISWCSFSRNHVQNLVETLSPSVTQLNLSGYRDRLALDDVKVLVDRCPDLQTLDLSDSTL
LTADSFLVLKRLQKLLHLSLSRCYHIHLAALSDLGKAIPSLRFLDVFGLVQDGQLAALQD
DSPRLAINARPFSAVARPTPAGAAQPDRTMWGRGCRLKVRF
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggacagccttcccctgcagcagctctccagccagaagcggttcggcaccaag
cggaagagcctcggttccgagtccactccgaccgacctggtgctgctgcgctccccgcgg
cccaagcagccctggccggcctgcctggggaaggagaaccaggaggcccggttcgtcctg
gcccggaggtcccgcaggaggcggcggtcgggctcaggtgtttcctgggatcagctgccg
gacgagctgctgctgcggatctgcggctgcctcccgctgccggacctgctgcgggcttcc
gcggtctgccgccgctggcgccgcctggcgctggacgagtccctgtgggtcagtgtggac
ctggagggcctgacccaaacgggcccggctctgcgtttggttctgaggaccggggtccag
aggctgcgctgcccgcgggcctttgtggaggaaccggacctgtcagaacccgggcggctc
cagctggtggatctggacctgtccggttccgtggtttccccctcggcgctgcgcagcgtc
gtctgccgctgcagccggctgcgccgcctcagcctggaggcgctgccgctgtccgacgac
gtgctcagctgcctggcccagaacccggacctgctgcagctcaacctgggcggctgctcc
ggattctccgccgccgctctggccgccatgctggactcctgccgcaggttggagcagctc
aacatctcctggtgcagcttcagccggaaccacgtccagaacctggtggagacgctgagc
ccctcagtcacacagctgaacctgagcggctaccgggacaggctggcgctggacgatgtg
aaggttctggtggaccgatgtccggacctgcagacgttggatctcagcgacagcacgctg
ctgacggccgacagcttcctggttctgaagcggctgcagaagctgctccacctgtcgctg
agccgctgctaccacatccacctggcggcgctgagcgacctcgggaaggcgatcccgtcg
ctgcggttcctggacgtgttcggtctggtccaggacggccagctggcggcgctgcaggac
gactcgccgcggctcgccatcaacgcccggccgttctccgccgtggcccggcccacgccg
gccggcgccgcccagcccgaccgcaccatgtggggccgcggctgcagactgaaggtccgg
ttctga
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