Poecilia reticulata (guppy): 103474333
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Entry
103474333 CDS
T05149
Symbol
brip1
Name
(RefSeq) Fanconi anemia group J protein isoform X3
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03440
Homologous recombination
pret03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103474333 (brip1)
03460 Fanconi anemia pathway
103474333 (brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pret03400
]
103474333 (brip1)
Enzymes [BR:
pret01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
103474333 (brip1)
DNA repair and recombination proteins [BR:
pret03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
103474333 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
103474333 (brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-GeneID:
103474333
NCBI-ProteinID:
XP_008423422
LinkDB
All DBs
Position
LG13:complement(7859566..7964555)
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AA seq
1380 aa
AA seq
DB search
MESGKKNMASPVEYTIGGVKVHFPCKAYPSQLAMMNSIMRGLNYGQHCLLESPTGSGKSL
ALLCSALGWQQAQMAKMKEGGGHVGDRSQSDKHVGDSKKSEPPNPCPCECHRAAAQPAVV
DLTESPCKETAQPSHTASEHVLLPXESQTKSQSLASRLSEKVQASLDPDCDKDEDFRPDR
KRNRTSEYKSHKRQRTQQGVIFIDDEPELDSETSGPQSWKTASTHQGAGLSSSCNCSELC
SRCPCASAKDNLKSKDKDGNKKIPKIFFGTRTHKQITQIAHELKRTVYSGVHMTILSSRD
HTCVNPDVAPHFNRNERCKDLLETKDGRSCRFYHGVQKMRDQHTLQWVHGLREAWDIEDL
VSLGKRLRSCSYYAARELMQDASIIFCPYNYLLDPMIRETMEIDLEGQILVLDEAHNIED
CARESASYTLELSSLQMTKDELDGMVXSNIRRSKHESLRNFCYALINWIQESQALLSERG
FESACKVWSGKDILTIFHSLGVTFDTFSNMKQNLASVLEKEEGVGLVNGKEDMVQVPIIS
ASTATVLKNLFMVLDFLYRDSCRFAEDYRIALQRSYAWTNQVPPDIPDAQGFLVRPHHRH
RQSARVKAEVLTLSFWCLNPAVAFSDLSGSVHSIVLTSGTLSPMGSFSSELGVKFTIQLE
ANHVINKSQVWVGTVGAGPQGRNLCATFQRSETFAFQDEVGDLLLHVCQVMAKGVLCFLP
SYKMLDKLKDRWVNTGLWEKLDQEKTVITEPRGGGKGDFDELLQMYYDAIKTCEGRDGAL
LIAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQHCKSRGLLPGHRW
YEIQAYRALNQALGRCIRHRNDWGALILVDDRYKNNPNKYIAGLSKWVRQLVQHHNTFSN
AMQSLEAFTKVQQNVEVAPVNSLAFNVSDLSKNSPLVVSGQSFSGEPEPRRTNSRDKPSY
SQQNTITQLKTEHHNTTEPLKGLQSAPSKQLSAQHLYHIFTINPTNTNLKTPIFKAKPAI
CAVRTGALQISSPPVNLETLRTKQTDGNYLSENTEAPGMSTITTPPDFKSESPVPAKSSD
VDEDKSVFYTPELFEDEGSLPKENHVSSPAVDPGTERSATPSQELATAFGEQSVVSVSKQ
SAELSPGQKEDTETLQQSEKTEEDESQNRQRGSRLHRLSRSRQRVSLSQTAVKVRRSYRQ
KHRRFIKVPKVSKSNTEQKSCSLGLYCSLCGKELLPDAHVQHDVCNKNHLAVLRELGCNA
GAHTCRCRCVPPPPVSDNWMLVVQSPSSLKALRGALEPYCDQSLTSYNAIWDPEERSVTR
FFQCKGCSAQRPKTSAPLMAAEIHYPGNDAGDQMWLAPAAVHLCSLISGKTEMEDFSSEH
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgggaagaaaaacatggcctctcctgtggagtacaccattggcggagtgaag
gtccacttcccctgcaaggcgtatccatcccagctagccatgatgaattcaatcatgcga
gggttgaactacggacagcactgtttgttggagagtcccacaggcagcggtaaaagtctg
gccttgctctgctctgctctgggctggcagcaggctcagatggctaaaatgaaagaagga
ggaggtcatgttggagacagaagccagtcagataaacatgtgggcgactccaagaagtca
gaacctcccaacccgtgtccctgtgagtgccacagggcagcagcccagcctgcggtggtg
gacctcactgagtcaccttgcaaagagacggcccagccatcgcacacagcatcagaacac
gtgctactacctgstgagtctcaaactaaaagccagtctttagcgtcccgtctgtcggag
aaagtccaggcctctctagaccccgactgcgataaagatgaggacttcagaccagacagg
aagcgcaaccgtacttcagagtacaagagccataaaaggcagcgtacacaacaaggtgtc
atattcattgatgacgaacctgagttggatagtgaaacatctggtcctcagagctggaaa
actgcctcaacccaccagggagccggtttgtcctcatcatgcaattgctccgaactttgc
tcccgctgtccgtgtgcatcagccaaagacaacttgaagagcaaagacaaagatggcaac
aagaagattccaaagattttttttggcacacgaacccataagcagataactcagattgct
catgagctgaagcgcaccgtttattccggagtgcatatgactatcctttccagcagagat
cacacctgtgtcaacccagacgtggcgccgcatttcaaccgcaacgaacgctgcaaggat
ttgctggagaccaaagatggaaggtcatgcaggttctaccatggtgtgcagaagatgcgg
gaccagcacaccctacagtgggtccatgggctgcgtgaagcctgggacatcgaagacctg
gtgtctctggggaaaaggctccgatcctgctcttactatgctgctcgggaacttatgcag
gatgcctctatcatcttttgtccgtataactacttgctggatccaatgatcagagagaca
atggagattgacctggaggggcagatcttggtgctggatgaggcccataacatagaagac
tgtgcaagggaaagcgccagctacaccttagagctcagcagcctgcagatgaccaaagat
gaactggacggsatggtccwcagtaacattagacgctccaagcacgagtctctcaggaac
ttctgctacgccctgatcaactggatccaagagagccaggcactgctgtctgaacgaggg
tttgagagcgcctgcaaagtctggagtggaaaggatatactgaccattttccacagcttg
ggtgtcacatttgacaccttcagtaacatgaagcaaaacctggcatctgtgttggagaag
gaggagggtgtyggtttggttaacggcaaggaggacatggtgcaggtcccaattatcagc
gcatctacagcaactgtcctgaaaaacctcttcatggtgttggattttctctacagagac
agytgccggtttgctgaggactaccgcattgcattgcagaggagctacgcctggaccaat
caggtcccgcctgacattcctgatgcccagggctttttggtccggcctcaccaccgacac
cgtcaaagcgcgcgggtcaaagcggaagttctcaccctgagcttctggtgtctcaaccct
gctgtggctttctctgacctgagtgggtcagtgcacagtatcgtgctgacatcaggaacc
ctgtcacctatgggctccttctcctctgaacttggggtaaaattcactatccagttagaa
gccaaccatgtgatcaacaaatcccaggtgtgggtgggcactgttggtgcaggaccccaa
ggccgaaatctctgcgccacctttcagcgctctgaaacatttgccttccaggatgaggtg
ggggatttgctgctccatgtctgccaggtcatggccaaaggcgtactctgctttctgcct
tcatacaagatgctggacaagctgaaagaccgttgggtcaacactggtctgtgggagaag
ctggaccaagagaaaactgtcatcacagagccccgcggtggtgggaagggggactttgat
gagctccttcaaatgtactacgatgccataaaaacttgtgaaggtcgagatggtgcacta
cttattgctgtatgcaggggtaaggtcagtgaaggcctagacttcacagatgacaatgcc
agagcagtagtgaccattggaattccttttccaaacatcaaagacctccaggtggaacta
aagatgaagtacaatgaccagcattgcaagtccagaggtcttcttccaggccatcgctgg
tatgagatccaggcctacagagctctaaaccaggcgctggggagatgcatccggcacaga
aatgactggggtgccctgattctggtggatgaccgatacaagaacaatcctaataaatac
attgcaggtttgtctaaatgggtccgccagcttgtccagcatcacaacaccttcagcaat
gctatgcagtctctggaagctttcactaaggtgcagcagaatgtggaggtggcccctgtg
aacagcctggcattcaacgtttctgatttgtctaaaaatagtcccttggtcgtgtcgggt
cagagttttagtggagaaccagaacctcggagaaccaattcacgtgacaaaccttcttat
tcccagcagaacacaatcacacagctgaaaactgaacaccataacacaacagagccgctg
aagggactgcaaagtgctccttctaagcaactctcagctcagcatttgtatcacattttc
accatcaaccctacaaacaccaaccttaagacgcccatctttaaagcaaaaccagcgatc
tgygccgtacggactggggccctgcagatttcttctccaccagtgaatctagaaacattg
cgcactaaacaaacggatggaaattatctcagtgaaaacactgaggctccggggatgtcc
acaataaccacccctcctgactttaaaagtgaatcaccagtaccagcaaagtcttcagat
gttgacgaggacaagagtgttttctatacaccggaactttttgaggatgaaggaagcctg
ccgaaagagaaccatgtgtcctctcccgcagttgatcctggtacagagagatctgccact
ccatcccaggagttagccactgcgtttggtgaacagagtgttgtttcagtcagtaagcaa
agcgcagaactatcaccgggccagaaagaggacacagagacactgcagcaaagtgagaaa
acagaggaggatgagagccagaacagacagagaggaagtagacttcacaggctgtccagg
tccaggcagagagtttccctcagtcagacagctgtaaaagtacgaagatcttataggcaa
aaacacagaagatttataaaagtccctaaagtgtcaaagagcaacacagagcagaaatca
tgttctttaggactttactgttctctctgtggaaaagaactacttcctgatgcacatgtc
cagcatgatgtgtgtaataaaaaccatctagctgttctaagagaacttggatgtaatgct
ggggcccacacctgccgctgtcggtgtgtacctccgccaccagtctcagacaactggatg
ctggtagttcaaagcccctcgtctctaaaggccttgaggggtgctctggagccctactgt
gatcagagtttaacttcatacaatgccatctgggaccctgaggagcgatctgttaccaga
tttttccagtgcaaaggttgctccgctcagagaccaaagacttctgcacctttaatggct
gctgagatccactaccctggaaatgatgctggagatcagatgtggctggccccagctgcg
gtccacctctgctctttgatttctggaaaaactgaaatggaggatttttcttcggagcat
tga
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