Poecilia reticulata (guppy): 103474543
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Entry
103474543 CDS
T05149
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103474543 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pret03041
]
103474543 (prpf8)
Spliceosome [BR:
pret03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103474543 (prpf8)
Complex C
U5 SnRNP specific factors
103474543 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
103474543
NCBI-ProteinID:
XP_008423826
UniProt:
A0A3P9QE77
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All DBs
Position
LG13:complement(14761495..14777325)
Genome browser
AA seq
2358 aa
AA seq
DB search
MAAAFPYRGVPPGMPPGVPPGVPPVVPPGVPPGVPPVVPPPAPVPDYMSEEKLQEKARKW
QQLQAKRYAEKRKFGFVDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPH
AVLKLLENMPMPWEQIRDVPVLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRD
RRHFKRMRFPPFDDEEPPLDYADNILDVEPLEAIQMELDQEEDSSVVEWFYEHQPLKDNP
KFVNGTTYRRWQFTLPMMSTLYRLANQLLTDLVDFNYFYLFDLKAFFTSKALNMAIPGGP
KFEPLVRDINLQDEDWNEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNV
VFIKTEDPDLPAFYFDPLINPISHRHSVKSQEPLPDDDEEFELPEFVEPFLKETPLYTDN
TANGIALLWAPRPFNLRSGRTRRAIDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLN
ALKHRPPKAQKKRYLFRSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLH
LDYNFNLKPVKTLTTKERKKSRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLADG
LQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLVYYRFNTGPVGKGPGCGFWSPGWRVW
LFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMM
PEGIKQNKARTILQHLSESWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYN
RERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWL
ESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEA
LSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFP
PWIKPADTEPPPLLVYKWCQGINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLL
RLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHR
ASEMAGPPQMPNDFLSFQDTTTESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEH
PDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSV
YSKDNPNLLFNMCGFECRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESM
QRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQT
RIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGM
SHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIP
RINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQA
LGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLW
WSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVF
DQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTT
QKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGN
WFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQII
WFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLA
KWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACL
KVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPD
KTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEIS
APSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRA
ISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNP
QVKEIRCIVMVPQWGTHQTVHLPNQLPSHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHA
KVMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYE
RVQMLLSDRFLGFFMVPGQVSWNYNFMGVRHDPNMKYDLQLSNPKEFYHEVHRPSHFLNF
ASLQEGEIYNADREDMFG
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcctttccctacagaggagtccctccagggatgccaccaggtgtgcctcca
ggtgtacctccggttgtcccccctggtgttccaccaggcgtccctcctgttgttcccccc
ccagcgcctgttccagactacatgtctgaagaaaaactccaggaaaaagcaaggaaatgg
cagcagctgcaggccaaacgctatgcggagaaaagaaagtttggctttgtggatgcccag
aaagaagacatgcctcctgagcacgtccgcaagatcataagggaccatggagacatgacc
aatagaaagtttcgccatgacaaaagagtctacctaggcgctctgaagtacatgcctcac
gcagtgctgaagcttctggaaaacatgccgatgccctgggagcagatcagagacgtccct
gtgctctaccacatcaccggagccatttcctttgtgaatgaaatcccttgggtcatagag
cctgtctacattgcccagtggggcaccatgtggatcatgatgcgtcgtgagaagcgtgac
cgacgacacttcaagaggatgcgctttccgccgtttgatgacgaagagccgccgctggac
tacgccgacaacatcctggatgtggaacctctggaggccattcagatggagctcgatcag
gaggaagattcttctgtcgtggagtggttctatgagcaccagcccctcaaggataatcct
aagtttgtgaacggcaccacctaccgtcgctggcagttcacgctccccatgatgtcgaca
ctgtatcgtctggccaatcagcttctaacagatttagtggactttaattacttttacctg
tttgacctgaaggccttcttcacttcaaaagccttgaacatggccatcccaggaggacca
aagtttgagccactagtcagggacattaaccttcaggatgaagactggaacgagttcaac
gacatcaacaaaatcatcatccggcagcccatcaggaccgagtacaagattgccttcccc
tacttgtacaataacctgccgcaccatgtgcatcttacctggtaccacacacccaatgtg
gtatttatcaagactgaggacccagatcttccagcgttttactttgatccgctgatcaac
cctatttctcacagacattcagtcaagagccaggagcctctccctgatgatgatgaggag
tttgagcttccagagttcgtggagccgttccttaaagagacgccgctctacactgacaac
acagccaatggcatcgctctgctttgggcccccagacctttcaacctgcgttctggccgc
acaaggcgtgccatcgatatccccttggtcaaaaactggtaccgagagcattgccctgcg
ggacagccggtgaaagtacgcgtgtcgtaccaaaaactgctgaagtactacgtactcaac
gctctcaaacacagaccccccaaggctcagaagaagaggtacctgttccgctcctttaag
gcaacaaagttcttccagtccaccaagctggactgggtggaggtggggctgcaggtctgc
aggcagggctacaacatgctcaatctgctcattcatcgcaagaacctcaactacctgcat
ctggactacaacttcaacctgaagccggtcaagacgctcaccacaaaggagagaaagaag
tccaggttcggcaacgccttccatctgtgcagggaggtgctacgtctgagcaagctggtg
gtggacagccatgtgcagtacagactgggaaatgttgatgctttccagctggctgacggg
ctgcagtacatctttgcacacgtgggacagctgacgggcatgtaccgctacaagtacaag
ctgatgagacaaattcgcatgtgcaaagacctaaagcatctcgtctactaccgcttcaac
actggtcctgtgggcaaagggccaggctgtggcttctggtctccaggctggagagtgtgg
ctcttcttcatgcgggggatcactccgctgctggagaggtggctcgggaacctgctggcc
aggcagttcgaaggtcgtcattccaagggcgtggccaagactgtgaccaaacagcgcgtg
gagtcgcactttgacctggagctgcgtgctgcagtgatgcacgacatcctggatatgatg
cctgaaggcatcaagcagaacaaggccagaaccatcctgcagcacctcagtgagtcctgg
aggtgctggaaggccaacatcccatggaaggtgcctggtctcccgactcccattgagaac
atgatcctgcgatacgtgaaggccaaagctgactggtggaccaatacggctcactacaac
agagagcgaattcgccgcggagccactgtggacaaaacggtgtgcaagaagaacctgggc
cggctgacccgtctgtacctgaaggctgagcaagagagacagcacaactatctgaaggac
ggaccttacatcactgcggaagaggctgtggccatttacacaaccactgtgcactggctg
gagagtcggcgcttctctcccatacctttccccccactctcctacaaacacgacaccaag
ctgctgatcctggctctggagaggctcaaagaggcatacagtgtgaaatctcgtctgaat
cagagtcagagggaggagttggggctgatagagcaggcctacgacaacccgcatgaagcg
ctttccaggatcaaacgtcacctgctcacacagagagctttcaaagaggttggtattgag
ttcatggacttgtacagccacctggtgcctgtgtacgacgtggagcccttggagaagatc
actgatgcgtacctggaccagtacctgtggtacgaggcagacaagaggcgacttttccct
ccctggatcaaaccagctgacactgaacctccaccgcttctggtctacaaatggtgccaa
ggcatcaacaacttgcaggacgtgtgggaaacggctgagggcgagtgcaacgtgatgctg
gagtctcgctacgagaaaatgtacgagaagatcgatctgactttgctcaacagactgctg
cgtctcatcgttgaccacaacattgctgattacatgacggccaagaacaatgtggtcata
aactacaaggacatgaaccacaccaactcttacggcatcatcaggggactccagtttgcc
tcgttcattgttcagtactacggtcttgtgatggacctgcttgtgctcggtttgcaccgt
gccagcgagatggccggcccaccccagatgcccaacgacttcctgagtttccaggacacc
accaccgaatcggcccatcccatccggctgtactgtcgctacatcgaccgcattcacatc
ttcttcagattttctgctgatgaggccagagacctgattcagcggtacctgacggagcac
ccagaccccaacaacgagaacatcgtgggatacaacaacaagaagtgctggcctcgtgac
gcccgcatgagactgatgaaacacgacgtcaacctcgggcgagcggtcttctgggacatc
aagaaccgcctgccgaggtctgtgaccacagtccagtgggagaacagcttcgtgtcggtc
tacagcaaagacaaccccaacctgctcttcaacatgtgcggcttcgagtgccgcatcctt
ccgaagtgccgcaccagctacgaggagttcactcacaaagatggcgtctggaacctgcag
aatgaggtcactaaagaaaggacggcccagtgtttcctgcgtgtggatgatgaatccatg
cagcgcttccacaacagagtgcgtcagattctcatggcttctggatccaccactttcacc
aagatcgtgaacaaatggaacacggctctgatcggcctgatgacctacttccgtgaggct
gtggtcaacacacaggagctgctggaccttctagtgaaatgcgagaacaaaatccagacc
cgtatcaagatcgggctgaactccaaaatgcctagccgttttcctccggtcgtcttctac
actcctaaagagctgggcggtcttggcatgttgtccatgggtcacgttctcatcccacag
tcagacctgcggtggtccaagcagacagacgtggggatcacccacttcaggtctggaatg
agtcatgaagaagatcagctcattcctaacttgtaccgctacattcagccatgggagagc
gagttcatcgactcccagagagtctgggccgagtacgccctcaagagacaggaggccatt
gcccagaacaggcgtctcactctggaggatttggaggactcatgggacagaggaatacct
cggatcaacacccttttccagaaggacaggcacactctggcctatgacaaaggctggaga
gtcaggacagacttcaaacagtatcaggtgctgaagcagaatcctttctggtggacccac
cagaggcacgacggtaagttgtggaacttgaacaactaccgcacagacatgatccaggct
ctaggcggcgtggagggcatcctggagcacacactcttcaaaggcacttacttccccacc
tgggagggtctcttctgggaaaaggccagtggctttgaagagtcgatgaaatggaagaag
ctgacaaacgcccagaggtctggtctgaaccaaatcccgaatcgtcgcttcactctgtgg
tggtcccccaccatcaacagagccaacgtgtacgtgggtttccaagtacagcttgacttg
acaggaatctttatgcacggcaagatccccacgctgaagatctccctcattcagatcttc
agggctcacttgtggcagaagattcacgagagcatcgtcatggatctctgtcaggttttt
gaccaggaactcgatgctctggagatcgaaaccgtgcagaaggagaccatccatcccagg
aaatcctacaagatgaattcgtcctgtgcagacatcctcctgtttgcgtcttacaagtgg
aacgtgtcccgcccgtctctgctcgctgactcaaaggatgtgatggacagcaccaccaca
cagaagtactggatcgacattcagctcagatggggcgactacgactctcacgacattgag
cgctatgccagagccaagttcctggactacaccacagacaacatgagcatctacccctcc
cccactggagtgctcattgccattgacctggcttacaacctgcacagtgcctatggtaac
tggttccctgggagcaaacctctgatccagcaggccatggccaagatcatgaaggccaac
ccggctctgtatgtgctccgagagcgcatccgcaaaggtctgcagctgtactcctcagag
cccaccgagccgtacctgtcctctcagaactacggagaactcttctccaaccagatcatc
tggtttgtggatgacacgaacgtgtacagagtcaccatccacaagacttttgaaggaaac
ttgaccacgaagcccatcaatggagccattttcatcttcaaccccaggacaggccaactg
ttcctcaagatcatccacacatctgtgtgggctggacagaaacgtctgggacagctggcc
aaatggaaaacggctgaagaagttgctgccctgatccgctccctccctgtggaggagcag
ccgaaacagatcattgtgaccaggaagggcatgttggaccctctggaggtgcacttgctc
gacttccccaacatcgtgatcaagggctccgagttacagctgcccttccaggcttgtctg
aaggtggaaaagtttggagacctgattctgaaggccactgagccacagatggtgctgttc
aacctctacgatgattggttgaagaccatctcgtcttacactgccttctcacgtctcatc
ctgatcctaagagcgctccacgtcaacaacgaccgcgccaaggtgatcctgaaacctgat
aaaaccacaatcactgagccccatcacatctggcccacgctcacagatgaggagtggatc
aaggtggaagttcaacttaaggatctcattctggccgattatggcaaaaagaacaacgtg
aacgtcgcctccctgactcagtctgagatccgtgacatcatcctgggtatggagatctca
gccccgtctcagcagcgtcagcagatcgccgagatcgaaaaacagaccaaagagcagtcg
cagctcaccgccacgcagacccgcaccgtcaacaaacacggagatgagatcatcacctcc
accacctctaactacgagactcagaccttctcttccaagactgagtggagagtcagggcc
atatctgctgccaacctccatctccgaaccaaccacatctatgtgtcctctgacgacatc
aaggagacgggttacacctacatcctgcccaagaacgttctcaagaagttcatttgtatt
tcagatctgcgggctcagattgcaggctacctgtatggcaccagcccaccagacaacccc
caggtgaaggagatccgctgtatcgtcatggtacctcagtgggggacacaccagactgtc
cacctccccaaccagctgccgtctcatgaataccttaaagaaatggagcctcttggctgg
atccacacacagccgaacgagtccccacagctgtccccacaggacgttacaacccacgct
aaggtcatggctgataacccgtcatgggatggagaaaagaccatcataatcacctgcagc
tttacgcctggttcgtgcacactcacagcctacaagctgacccccagcggctatgaatgg
ggtcggcaaaacaccgataaaggcaacaacccgaaaggctaccttccatcccactatgaa
agagtccaaatgctgctctctgatcgcttcctgggcttcttcatggttcccggccaagtc
tcctggaactacaacttcatgggtgtgcgccacgatcccaacatgaagtatgacctgcag
ttgtccaaccccaaagagttctaccatgaagtccatcgaccttcgcacttcctaaacttc
gcctcgctgcaggagggcgagatttacaacgctgacagagaggacatgttcggctga
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integrated database retrieval system
