KEGG   Poecilia reticulata (guppy): 103474942
Entry
103474942         CDS       T05149                                 
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
pret  Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:pret00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pret04131]
    103474942 (copb2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pret04147]
    103474942 (copb2)
Membrane trafficking [BR:pret04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    103474942 (copb2)
Exosome [BR:pret04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   103474942 (copb2)
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_HPS5 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_SCAP ANAPC4_WD40 WDR90_beta-prop_4th PEP5_VPS11_N WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_LRRK2 WD_LRWD1 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 103474942
NCBI-ProteinID: XP_008424449
UniProt: A0A3P9P389
LinkDB
Position
LG13:25880503..25891943
AA seq 1187 aa
MPLRLDIQRRLTARSERVKSADLHPTEPWMVLSLYTGTVVVWNHETQAIIKSFELCDLPV
RVAKFVARKHWIITGADDMQIRVFNYNTLDRVFMFEAHCDYIRCVAVHPTQPFVLTSSDD
MLIKLWDWDRKWTCCQVFEGHAHYVMQVVFNPKDNNQFASASLDRTIKVWQLGSKSPNFT
LEGHEKGVNCIDYYNGGDKPYLISGADDHLVKIWDYQNKTCVQTLESHVQNVTCVCFHPE
LPVILTGSEDGTVRVWHSNTYRLENTLNYGLERVWCICGQSGSNNIALGYDEGSIIIKLG
REEPAMSMDSSGKIMWARHSEVQQANLKTLGETEIQDGEKLPLGAKDMGSCEIYPQTIQH
SPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSQYATREGNSVVKIFKNFKE
KKTFNPDFGADGIFGGFLLGVRSTSGLAFYDWESSSLIRRVEILPKHMFWSDSGELVCIA
TEESFFVLRYLTERVSAAQESKETLTEDGIEDAFEVLGEVQQVVKTGLWVGDCFIYTSSV
NRLNYYVGGEIITIAHLDRTMYLLGYIPKDDRLYLGDKELNIISYSLLLSVLEYETAVMR
KDFTTADRVLPTIPVEQRTRVAHFLEKQGFRQQALAVSTDLEHKFELALQLGELGMAHEL
ALEAESEHKWKQLAEVASTKGQFSLAQECLHQAQDYGGLLLLATASGRADMVGKLAEGAE
KDGKTNVAFLTYFMQGRTDKCLELLIKTDRLPEAAFLARTYIPSQVSRVVKLWKENMSKV
NQKAADALAVPDQYNNLFPGLQQALLAEQYLKETHVGVRPAAEYPLVVSNEDRDVLEESK
GFITTGEITEPGEAVGSMNESPAASSEATVMEEPIPIKHEPPADPVPEKIFSFPEEAPLS
VFAAKDHVEPNQAQSECRVKRENIMKSETLLIAEELLIQKPCTEAPAKDSEAIQSSPVEG
VDLSEEVADQAIASAAEAQPDITASEEETQTADNELISTDLKANSVIASEFAALEETSSP
DQLETDAIPLVATATEETPIAKLPIAAEELVSLKPTECSLLDAPSAAGQAFSDPILDSLL
DSDEDASAALKPVAVWEDEQEQEEKTAEPPAETEHGSEAGDLPEAESEGSDDPAEANVAE
QEAGSEGSQDLAEDLEEAIDHEDLDDLDLDSFELEDIDTSDMNLLGE
NT seq 3564 nt   +upstreamnt  +downstreamnt
atgcctctgaggttggacatccagcggaggctgacagctcggtcagagagagtgaagagt
gccgacctgcaccccactgagccgtggatggtgctcagcctctacaccggcactgttgtc
gtctggaaccatgaaacacaggcaattattaaatcctttgagttgtgcgatctgcctgtt
agagtggccaagtttgtagccaggaaacactggatcattaccggagcagatgacatgcag
atccgtgtgttcaactacaacacgctagacagggtgttcatgttcgaagcccactgcgac
tacatccgctgcgtcgctgtgcaccccacgcagccctttgtcctcaccagcagcgatgac
atgctgatcaaactgtgggactgggacagaaagtggacgtgctgtcaggtgtttgaggga
cacgcacactacgtcatgcaggtcgtcttcaaccctaaagacaacaaccagtttgccagc
gcctctctagacagaaccattaaggtgtggcagttgggctccaagtctcccaatttcact
cttgagggtcacgagaaaggagtgaattgcattgattactacaatggaggagacaagccc
taccttatatcaggagcagatgatcatcttgtgaagatctgggattatcagaacaaaacg
tgtgttcagaccctggagagtcatgtgcagaatgtgacctgtgtctgcttccaccctgaa
ctgccggtcattctcacaggatctgaggacggcactgtcagagtttggcactctaacacc
tacagacttgaaaacacacttaattacgggctggaacgagtgtggtgtatatgtgggcag
tctggctccaacaatatagctctgggctatgatgaaggcagcatcatcattaagctgggt
cgggaggagccggccatgtccatggactccagtgggaaaatcatgtgggcccgtcactct
gaggtgcagcaggccaacctgaagacgctgggagagacggagattcaggacggagagaag
ctcccacttggtgccaaagacatgggcagttgtgagatttacccacagaccattcaacac
agccccaacggcagatttgtagtggtgtgcggagatggggaatatatcatctacaccgcg
atggccttgaggaacaaaagctttggctctgctcaggagtttgtctgggcacacgactcc
tcacagtatgccacgagggagggcaatagcgtggtgaaaatatttaaaaactttaaagag
aagaagactttcaaccctgattttggggctgatggcatctttggtggcttcttactggga
gtgaggtcaaccagcggactggctttctatgactgggaaagctccagtttgatccgccgt
gttgagatcctgcctaaacatatgttctggtctgactctggggagctggtgtgtattgct
acagaagagtccttctttgtgttgcgctacctgacagagcgagtgtcagcagcacaggag
tctaaagaaacattgacagaggatgggatagaagatgcttttgaggtactgggggaggtc
cagcaggttgtaaagacaggtctatgggtcggagattgcttcatctataccagctccgtg
aacagactcaactactatgttggaggagagatcataactattgctcacctggacaggacc
atgtatctgctgggctacatcccaaaggacgaccgtctctatctaggagacaaggagctc
aacatcatcagttactccctgctgctgtctgtgctggaatatgagacagctgtcatgagg
aaagatttcaccacggctgacagggtccttcccacaataccagtggagcagaggaccagg
gtcgcccacttcctggagaaacagggcttcagacagcaggcgctggctgtgtccactgat
ctggaacacaagtttgagcttgctctgcagctgggcgagctggggatggcgcatgaactg
gctctggaggcagagtctgagcataaatggaagcagttggccgaagttgcctctacaaag
gggcagttcagcctggctcaggaatgtctgcaccaagctcaggattacggtggattactt
ctgctggcaaccgcctcaggcagggcagacatggtagggaaactggccgagggagcggag
aaagatgggaagaccaacgtggccttcctcacctacttcatgcaaggaagaactgacaaa
tgtttggagctgcttattaaaactgatcgattgccagaggctgctttcctggcaagaaca
tacatacccagccaagtctcaagggtggtgaagctgtggaaggagaacatgtccaaggtt
aaccagaaggcagcagatgcactggctgtcccggatcagtacaacaacctgttccctggc
ctccagcaagctctgctggctgagcagtacctgaaggagactcatgttggggtcagacct
gctgcagaataccccctcgtcgtgtcaaacgaggaccgtgatgttctggaggagtccaaa
ggttttatcaccacaggagagattactgagccaggggaggcagtgggaagcatgaatgaa
agccctgctgcctcttcagaagcaacggtaatggaagaacccattccaataaaacatgag
cctcctgctgatcctgttcccgagaaaatatttagttttccagaggaagctcctctgtct
gtctttgccgccaaagaccatgttgagccaaaccaagcacagtctgagtgtcgagtcaaa
agggaaaacatcatgaaatcagagactttacttattgcagaggaactcttgatccagaaa
ccctgcactgaggctcctgctaaagactcagaggccatacagtccagtccagtcgaaggt
gtagatttatctgaagaggtggctgatcaggccatagcttcagcagctgaagctcagcca
gatatcacggcatctgaagaagaaacacaaacggcagataatgagctaattagcacggat
ctaaaagccaattctgtgattgcatcagaatttgcagcattagaggaaacatccagccct
gatcaactggaaacagacgccattcccttagttgctacagcaacagaagaaactccaatt
gcgaagctacctatagcagcagaggagctcgtctctttaaaaccaacagaatgttccctg
ctggatgctccatcagccgcgggccaggctttttcagatccgatcctcgattcattgcta
gactcagatgaagatgcatcagcggcgttgaagccggtcgcagtgtgggaggatgagcaa
gaacaagaggagaaaactgcagaacctccagcagagacggagcatgggtcggaagcgggc
gatcttcctgaggctgaatcagaaggatcagacgacccagcagaggccaacgtggcagag
caggaagcaggatctgaaggatcacaggacctagcagaagacctcgaggaagcaatcgac
catgaggaccttgatgatctggatctggacagttttgaactggaggacattgacacctca
gacatgaatctgctgggtgaatag

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