Poecilia reticulata (guppy): 103475061
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Entry
103475061 CDS
T05149
Symbol
gltscr1
Name
(RefSeq) glioma tumor suppressor candidate region gene 1 protein isoform X1
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103475061 (gltscr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pret03036
]
103475061 (gltscr1)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
103475061 (gltscr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
103475061
NCBI-ProteinID:
XP_008424671
LinkDB
All DBs
Position
LG13:29844793..29866067
Genome browser
AA seq
1787 aa
AA seq
DB search
MDDEDGRCLLDVICDPEALNDFLHGSETHLDTDDLLDGTSDPSSSFFSATGGHVSEVQPA
VQLPVSESAGLPRVSVDLDFLEDDDILGGSPGGDGDSNGIGTNHEPCDILQQSLAEANIT
EQSLQEAGSELDLVSFGIPGLTQVVQTLPDAGSAAAVGVGIGVGGAATIFSGSAQSVAGN
PGNATADMLGSVLAQQGIQLQPQVMNKTISVQPFMQQVGLGNVTLQPISSLQALSNGSQS
GPLGIGQIQVVGQPTVMTINQSGQQILAKAMGGYQEVSAAGSQAGLGLIQGNKAAVGAPA
LNGPAVSVSSTSSINAATMSAPAGLVGFGGGVAAPTQTQAQIMQNVIIQRTPTPIQPKPP
QGGSIQPKVFKPQQQQLPPPQAAPQAQQNDAHKALGLQQLPVSTAQNVTFLTGKPGSNVV
LSTQAATQGTQFQQALFKQQGAPPSGKPLSVHLLNQQGSIVIPSQTVLQSQNHQFLLPQL
QAGGQILTQHPGGHIITSQGPGGQLIANQILTANQNINLSQVLTSQGHPGAAHILSGPIQ
LQPGQMGTPTLFQMPVASLAQSQSQTQTPAASGHAQTVIQGLQNSLTMVGQVEGLSPAIS
LQTTLQAQPGAVPSAAGGQTAEAAVTVLGGSADPAPQLLPQSSILAVQPASSAAAAASSS
PSMSVSTSSSVTAVGLVPSQAQSSPGRLLFTNQGSSMILSQESLQMFLQQEQRHQTENES
TQSVGVPASVIVSSNSVTTAAPAVHDSQLTDSWLGQSHSPSPGPSHMTAVVKVPSGGAQQ
ALKIQGMSSSPALTSHATPPPVAESPQPSQSPLTLSQQIQSPHHQQPPQSRPSSQPQPQT
PSRSCTPSSHTQLFIVHNQIAESPKPAAAATQAQLQQAPPQQVHIQVQHQPLPRPASQPT
PYQQEMPPMSQSPKPLPAAAASPAQHQFAAPPVSAPAVVKAQVPLQGLTAGQQHHLQLVG
AQIQTLSSITQPSLQHKQLLEKLQQVKQNIMLQAKPQPQATSQFNSQQDVPVDKVVMTSS
ASADAPAQLPTMLQPTSVLIKTTATGSSDLQVFSGAQVQAAAAMVNQTVTPASLTQPAQV
QPKPGVISSVGGMTLGKAAMKIQVLGPALTQMPVPQPQPPLQTQLTSQTPPVKMPLSTEP
SKEARMLEQLRKHQGSVLHPNYSAPFHSFDDTLDRLLPYHLYQGTANSSQDYQRVDDEFE
RVSCQLLKRTQAMLDKYRYLLFAESKQRLGPSAEMVMIDRMFIQEEKVALNQDKILAKER
PEEFAATVRMLESGVPSQPKPAPPDLPSASPAASTAAPALIPSPAPLLKVAPTPPPAPAA
PASPTPPPAPTPPSCSPFPPTKLVIKHGGGSASVSWSSSCPPATKPVTPAASSSSSSSSL
NSQSAADDDDALPQRTSKPPIKTYEARSRIGLKLKIKQDQTGFSKVVHNTALDPVHAPQP
RSTPEPPPEPAKPQPQHLATPPNTVIRTQSPTASVTPAQSNLRNAPPSSSSSSSTTQMNG
SLDHHPVKHNPASSQTTCRLPLRKTYRENISPRVRPGVPGGLDESFSYPITTPSPPRHEA
STPPSERTVIASVRVEKRDREADPSLEGGRLGNTMDKMNEVFNRSVKTATHHHLSLLLDR
EAAKEREDEHMDQDADKYKRFSGKNKHRTGGTFRMDQHAPGPPSPESSFARDSLLPAKRC
KSDSPDMDNASFSSGSPPDDSLNEHLQCAIDSILNLQQEPAVRGHHVRAGAGGRTHQHQS
QRPGDSAVSTHRAPPPTAPSAPSSSSLGPPVGGRGHNGSLVPQTQSR
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaggacggcaggtgccttctagatgtaatttgtgacccagaagctctaaat
gactttcttcatggatctgagacccatttggacactgacgaccttttggatggtacgagt
gacccctccagctcgttcttctctgccactgggggccatgtttcagaggtccagcccgcg
gtccagctgccagtcagcgagtcggccggcctccccagggtcagcgtggacctggacttc
ctggaggacgatgacatcctgggcggctcgccgggcggagacggcgacagcaacggcatc
ggaacgaaccacgagccgtgcgacatcctgcagcagagcctggcggaggccaacatcact
gagcagagcctgcaggaagccgggtccgagctggacctggtgtccttcgggatcccgggg
ctcacccaggtggtccagaccctgcctgacgctggaagcgccgccgccgtcggggtaggc
atcggcgtcggcggggcagcgaccatcttctccgggtcggcgcagagcgtggcgggtaac
cctggcaacgccacggccgacatgctggggtcggttcttgcccagcaggggatccagcta
cagccgcaggtgatgaacaaaaccatcagcgtccagccgttcatgcagcaggtcggcctc
ggcaacgtgacgcttcagcccatttccagcctccaggccctttccaacgggagccagtcg
ggaccgttgggtatcggacagattcaggttgtgggccagccgacggtcatgaccatcaac
cagtcggggcagcagatcctggccaaagccatgggcgggtaccaggaggtgtccgctgcc
ggctctcaggccggcctgggcctgatccagggtaacaaagccgctgtcggcgctccagct
ttaaacggaccagctgtttctgtcagcagcacgagcagcatcaacgccgccaccatgagc
gcccctgcggggctcgtgggctttggaggaggagtggcagcgccaacacaaactcaagcc
cagatcatgcagaacgtgatcatccagcgcacaccgacacccattcagcccaaaccgcca
caggggggctccattcagccaaaagtcttcaaaccgcagcagcagcagttgccgccgcca
caggcagcgccccaggctcagcagaacgacgcgcacaaggcgctggggctgcagcagctt
ccggtttctactgcccagaacgtcactttcctgacgggaaagcccggttctaacgtcgtc
ctgagcacccaggccgccactcagggcacgcagttccagcaggccctgttcaagcagcaa
ggggcgccgccttctgggaagccccttagcgtgcatctgttgaaccagcagggcagcatc
gtcatcccgtcccagacggtcctgcagagccagaaccaccagttcctgctgccccagctg
caggccggaggccagatcctgacccaacacccgggcggccacatcatcacgagccagggc
ccaggcggacagctcatcgccaaccagatcctaactgccaaccagaacatcaatctgagt
caggtgttgacgtcacagggccatcccggcgccgcccacatcctgtccggacccattcag
ctgcagcccggtcagatgggcacgccaacactttttcagatgccggtcgcctctttggct
cagagtcaaagccagacgcagacgccggccgcctcgggccacgcccagacggtgatccag
ggcctccagaactccttgaccatggtgggtcaggtggaggggctgagcccggccatcagt
ctgcagaccaccctgcaggcccagccgggtgccgtgcccagcgccgcaggaggccagact
gcggaagctgctgttaccgtgctgggaggctccgcagacccggcgccgcagcttttaccg
cagtcgtcgatcctcgccgtgcagcctgcgtcgtctgccgccgccgccgcttcttcctct
ccgtccatgtctgtctcaacgtcgtcctccgtgacggcggtggggctggtcccctcgcag
gctcagagcagcccagggaggctgctgttcaccaaccagggctccagcatgatcctgagc
caggagtcgctgcagatgttcctccagcaggagcagcgccaccaaacagagaatgagtca
acccaatcagtgggcgtcccagcgtctgtaatcgtcagcagcaacagcgtcactactgcg
gcccctgctgtccatgacagccagttaactgactcctggctgggtcagagccacagccct
tcccccggcccctcccacatgacagcagtggtaaaggttccctctggtggagctcagcag
gctctgaagatccagggcatgtcctcctcgccggcgttgacctcccacgccacgccgccg
ccggtggcggaaagcccgcagccttcccagtctcctctgactctgagccagcagatccag
tcgcctcaccaccaacagccgccgcagtcgcgcccttcctctcagcctcagccgcaaact
ccctcacgctcctgcacgccgtcatctcacacccagctcttcatcgtccacaaccagatc
gcagaatctcccaaacccgccgccgccgccacgcaggctcagctgcagcaggcgccgccc
cagcaagtgcacattcaggtccagcaccaacctctgcctcgaccggcctcgcagcccacg
ccctaccagcaggaaatgcctcccatgtcgcagtcgcccaagcctcttcctgctgctgct
gcttcacctgcgcagcaccagttcgctgcgcctcctgttagcgctccagccgtagtgaaa
gcccaagttcccctccagggcctcacagccgggcagcagcatcacctgcagttagtcgga
gcacaaatccagactctgtcctccatcactcagccctcgcttcagcataaacagctgctg
gagaagctgcaacaggtcaagcagaacatcatgctacaagcaaagcctcagcctcaagcc
acgagtcagttcaattcgcagcaagacgtgcctgttgacaaggtggtgatgacatcatca
gcgagcgccgacgcacctgctcagctccccacgatgctgcagccgacctcggtgctcatc
aaaaccaccgccacaggatcaagtgacctacaggtattctcaggagcccaagtgcaagct
gcagcagcaatggtgaatcagacggtcactcctgccagccttacccagcctgcacaggtt
cagccaaagccaggagtgatcagctcggtgggggggatgactctgggaaaagcagcgatg
aagatccaggtgttggggcccgctctgactcagatgccggttccgcagccgcagcctcct
ctgcagactcagctcacatcacagacgccaccagtaaaaatgcctttaagcaccgagccc
agtaaagaagccaggatgctggagcagctaagaaaacatcagggttcagtgcttcacccc
aactacagcgctcctttccactcgtttgacgacactctggacagactgctgccttaccat
ctctaccagggaaccgccaactcctctcaagactaccagagagtggatgatgagtttgag
agagtctcctgccagctgctgaagcgaacccaggccatgctggataaatatcggtacctg
ctctttgcggagtcaaaacagagactgggcccgtcggcagagatggtgatgatcgaccgg
atgttcatccaggaggaaaaggtcgccctgaaccaggacaagattctggccaaggagaga
ccggaggagtttgcagcgaccgtgcggatgctggagagcggcgttccatcccagccaaaa
ccagcgcctccggatctgccgtcagcgagtccggcagcctccaccgctgcgcctgctctg
ataccgtctcctgctcctctcctgaaggtcgcaccgactcctcctcctgcgccggctgct
cctgcgtctcccacgcctcctcctgcccccacccctccctcctgctcccccttccctccc
accaagctggtcataaagcacggcggcggcagcgcctccgtctcctggtccagcagctgt
cctccggcgaccaagccggtcactccagcggcgtcctcctcttcgtcgtcatcgtcgcta
aattcccagtcggcggcggatgatgacgacgctcttccacagcgaaccagcaagccgccc
atcaagacgtacgaggcgcgcagccggattggtctgaagctgaaaatcaagcaggaccag
accgggttcagcaaggtggtccacaacaccgcgctggatcccgtccacgccccccaacct
cgctccaccccggagccgccgccggagcctgcaaagccccagccccagcacctagccacg
ccccccaacaccgtcatcaggactcagtccccgacggcgtcggtcacgcccgcccagagc
aacctcagaaacgctcctccgtcgtcgtcgtcgtcgtcatcgacaacgcagatgaacggc
tcgttggaccaccacccggtcaaacacaacccggcgtcgtcgcaaaccacctgccgcctg
ccgctcagaaagacctacagggagaacatcagtccccgggtccggcccggcgtccccggc
gggctggacgaaagcttttcctaccccatcaccacaccgtcgccgccgcggcacgaggcg
tccaccccgccatcggaaaggaccgtcatagcgagcgtgcgggtggagaagcgagacagg
gaggcggacccgagtctcgaaggcggacgcttggggaacacgatggacaaaatgaacgag
gtgttcaaccggagcgtgaagacggcgacccaccaccacctttctctgctgctggaccgt
gaggcggcgaaggagagggaggacgagcacatggaccaagacgctgacaagtacaaacga
ttcagcgggaaaaacaaacacaggactggcgggacgttcagaatggaccagcacgcgcct
ggaccgccgtccccggagtcgtcgttcgcccgagactctctgcttcccgccaaacgctgc
aagtcggactcgcccgacatggacaacgccagcttctccagcggcagcccgccggacgac
tcgctcaacgagcatctgcagtgcgccatcgacagcatcctcaacctgcagcaggagccc
gccgtgcgcggacaccacgtccgggccggcgccggcggcaggacgcaccaacaccaaagt
cagcgcccgggagactcggcggtctccacacacagagctccgcccccgacggcgccgtcc
gctccgtcgtcgtcctcgctgggccctccggtcggcgggcggggccacaacggcagcctg
gtcccccagactcagagcagataa
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