Poecilia reticulata (guppy): 103475214
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Entry
103475214 CDS
T05149
Name
(RefSeq) hypoxia-inducible factor 3-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04137
Mitophagy - animal
pret04140
Autophagy - animal
pret04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103475214
04137 Mitophagy - animal
103475214
04148 Efferocytosis
103475214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pret03000
]
103475214
Transcription factors [BR:
pret03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
103475214
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
HIF-1
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
103475214
NCBI-ProteinID:
XP_008424883
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Position
LG13:complement(32152754..32170689)
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AA seq
674 aa
AA seq
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MEKEDGVVAVKRSSSEQRKLRSRDAARCRRSQETEVFYELARTLPLPRRVCTHLDKAGIM
RVTLSFLRMQQLLRPEESVKKEEEEEDEDPMDAFFPQALAGFVMVMTEEGDMVFLTENVN
KHIGITQLELIGQSVYDFIHPCDQEELRDLLTPRPGLSKKLMAEQPSERNFFLRMKSTLT
SRGRTVNIKSATWKVLHCTGHIRPFGSASPPAARVMTLLCEPISHPSSVEFPLDSCTFLT
RHTMDLRFTHCEGRVTELVGYKPEDLIGRSAYEFYHALDSDRIKKSLLTLLSKGQVNTSP
YRFLANSGGFVWAETQATVLYNNKTSQPEAVVCLNFILSAVEQPDVVLSVEQTRCSLLPK
TKPSSPERAAEDSGISDTCDSDGEEAGGSAKLLLGLTEKPEELLQLEDGGEPPLTAGGVE
LSFASPPSPDTVPDHPKDLCSPRLRQLLSPIFDGLNPSSSPAASSEPDLVTEPPLLTSEC
SGSGLTAGLRPAQSPCEDEAMDTSEVERFFTICPEETQLKEQAAEDVEGKELEMYAPYIS
MDDDFQLTFLSNLPQEAGKPASLLLQGADGIPAVTVSRKRTHDLDKEPPPLLLIQDKRHK
PDPTSIEEELLLSHRLLGSLEDGDQSDLVLDSGRSQLLTDRDPVLSELCDTAALMRDIFV
PRPADLSPPLSPMT
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaagacggggtcgtggcggttaaacggagcagctcggagcagaggaagctc
cgctctcgcgatgcggcccgctgccggcgcagccaggagaccgaggtgttctacgaactg
gcccggaccctgccgctgccgcgccgagtctgcacccacctggacaaggccggcatcatg
agggtgacgctcagcttcctgcggatgcagcagctcctgcgacccgaagagagtgtgaag
aaggaggaagaggaggaggatgaagatccgatggacgccttctttccccaggcgttggcg
ggcttcgtcatggtgatgaccgaggagggggacatggtgttcctgacggagaacgtcaac
aagcacatcggcatcacgcagctggagctgatcggtcagagcgtctacgacttcattcat
ccctgcgaccaggaggagctgcgagacctgctgactccgcgtccaggtctgagtaagaag
ctgatggcggagcaaccgagcgagaggaacttcttcctgcggatgaagagcaccctgacc
agcagggggcgcaccgtcaacatcaaatctgccacctggaaggttctccactgcacgggc
cacatccgcccgtttggctcagcgtcgccccctgctgccagagtgatgacgctgctgtgc
gagccgatcagccacccgtccagcgtggagttccctctggacagctgcaccttcctgacg
cgccacaccatggacctgcgcttcacccactgcgagggcagggtaacggagctggtgggg
tacaaaccggaggacctgattggacgctcggcctacgagttttatcacgcgctcgactcg
gatcgcatcaagaagagcctgctgacacttctgtccaaaggtcaggtcaacacgtcgccc
taccgcttcctggccaacagcggcggcttcgtgtgggccgagactcaggccaccgtcctc
tacaacaacaagacgtcgcagcccgaagccgtcgtctgcctcaacttcatcctcagcgcg
gtggagcagccggacgtggtgttgtccgtcgagcagacccgctgcagcctcctgcctaaa
accaagccgtcctccccggagcgcgccgccgaggacagcggcatctccgacacctgcgac
tcggacggcgaggaagccggcggctcggcgaagctcctcctggggctgacggagaaaccg
gaggagctgctgcagctggaggacggcggggagccgccgctgacggcaggtggggtggag
ctgtcgttcgccagtcctcccagtccagacacggttccggaccatcctaaggatctgtgc
agccctcggctgcggcagctgctgtcgcccatcttcgacggtctgaatccgtcctcgtcg
ccggccgcctcctctgagccggacctggtaaccgagcctcctcttttaaccagcgaatgt
tctggttctggtctgactgctggtctccgtccggcccagagcccctgtgaggacgaggcg
atggacaccagcgaggtggagcgtttcttcaccatctgcccggaggaaacgcagctcaag
gaacaagctgccgaggacgtggaggggaaggagctggagatgtacgcgccgtacatctcc
atggacgacgacttccagctcaccttcctcagcaatctgccgcaggaagccggcaaaccc
gcctcgctgctgctccagggcgccgatgggattcctgccgtcaccgtcagcaggaagagg
acccacgacttggacaaagagccgccgcctctgctgctgatccaggacaagaggcacaaa
ccggacccgacctccatagaggaggagctgctgctcagccacaggctgctgggttcgctg
gaagacggcgaccagtcggatctggttctggactccggacgcagtcagctgctcacagac
agagacccggttctgtcagaactgtgcgacaccgcagctctgatgagggacatcttcgtc
cctcggccggctgatctgtcgccgccgctctcgcccatgacctga
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