KEGG   Poecilia reticulata (guppy): 103475267
Entry
103475267         CDS       T05149                                 
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret03020  RNA polymerase
pret03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pret00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103475267 (polr2d)
  09124 Replication and repair
   03420 Nucleotide excision repair
    103475267 (polr2d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pret03021]
    103475267 (polr2d)
   03400 DNA repair and recombination proteins [BR:pret03400]
    103475267 (polr2d)
Transcription machinery [BR:pret03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     103475267 (polr2d)
DNA repair and recombination proteins [BR:pret03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103475267 (polr2d)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4
Other DBs
NCBI-GeneID: 103475267
NCBI-ProteinID: XP_008424981
LinkDB
Position
LG13:32934575..32937188
AA seq 144 aa
MAAGGSSVPPQLGDVEEDASQLLFPKEFENAETLLNSEVHMLLEHRKQQNESAEDEQELS
EVFMKTLNYTARFSRFKNRETITAVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSL
EGRFEDEELQQILDDIQTKRSFQY
NT seq 435 nt   +upstreamnt  +downstreamnt
atggcggccggaggtagttcggttcccccgcagctcggagacgtagaagaagacgcttct
cagcttctgtttcctaaagagttcgagaacgcggagacgctgctgaactcggaggtccac
atgctgctggagcaccggaagcagcagaacgagagcgccgaggacgagcaggagctgtcc
gaggtcttcatgaagacgctcaactacacggcccgcttcagccgcttcaagaaccgcgag
accatcaccgccgtgcgcagcctcctcctgcagaagaagctccataagtttgagctggcc
agtttggccaatctgtgtccagaagctgccgaagaggccaaggctctgatccccagtttg
gagggtcggtttgaggatgaggagctgcagcagatcctggacgatatccagaccaagagg
agcttccagtactga

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