Poecilia reticulata (guppy): 103475287
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Entry
103475287 CDS
T05149
Name
(RefSeq) autophagy-related protein 16-2 isoform X1
KO
K20868
autophagy-related protein 16-2
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103475287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103475287
03029 Mitochondrial biogenesis [BR:
pret03029
]
103475287
Membrane trafficking [BR:
pret04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
103475287
Others
Rab GTPases of specific organelles
Auto phagosome
103475287
Mitochondrial biogenesis [BR:
pret03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103475287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ATG16
ANAPC4_WD40
Cytochrom_D1
TFIIIC_delta
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
103475287
NCBI-ProteinID:
XP_008425012
LinkDB
All DBs
Position
LG13:complement(33189626..33204380)
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AA seq
585 aa
AA seq
DB search
MDPGGASRRSSRSAETWRGHIIQQLKHRDRIQSAMFRDLIRFYTGLLEKTSLTKGFLSGS
GRPPAESCARSSLQQLKKTTGELAYKVWELQQQITVKECDLQELQTRLQKEGGRLAEASE
AKRALRDEVEQVRQKNKTLKAAYDALLQRQREAESKLREEKEKEERVLEDMMHQKKQAAA
RMNHRNERRSRARQATVQKQLQTAARSKVIVDSSPSTPTSRSTSPKPEDQDKSGGRGATR
LFRSASASSPRFFSSIREMFDRKRRGHSVRSLEEDLPFPVGICLSARVPVRPLQVLEAHE
QGINAVRFSFGSDLLATGGTDRVIKLWDVRAGSLTHRATLDGSTEGITCVEFDHTGRRIL
AASHNKSALLWRLDDSVPKVTLTGHSRKVTAARFTCVPHQVVTGSTDRTVRLWDLNRAAC
VQQGEVASFCSDLVCSDSRIISGHFDCKIRVWDSRTVSCVQELPSQGRVTSLDLSSDRRQ
LLSCCRDDCLQLLDLRWTNDRMCFRADGFKCGGDSTKAVISPDGCYLAAGSADGAVYIWN
VSTGGLEARLPDQHSSSITAVSWSLSGEHFVSVDRSRRAVLWSDI
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggcggggcgtcgcggcgaagcagccggtccgcggagacctggagggggcac
atcatccagcagctgaagcaccgggaccggatccagagcgccatgttccgggacctgatc
cggttctacactgggctgctggagaaaaccagtttgaccaaagggttcctcagcggctcc
ggcagacctcccgctgagagctgcgcccgttcctctctgcagcagctgaagaagacgaca
ggcgagctggcctacaaggtgtgggagctgcagcagcagatcacagtcaaagagtgtgac
ctgcaggaactacagaccagactacagaaggagggcggtcggctagcagaggcgtccgaa
gctaaacgggctctgagggatgaggtggagcaggtgagacagaagaacaagacgctgaag
gcggcgtacgatgcgctgctgcagcgccagagggaggcggagtccaaactcagggaagag
aaggagaaagaggagcgcgtcctggaggacatgatgcaccagaagaagcaggccgccgcc
cgcatgaaccaccgcaacgaacggcgctccagagctcgacaggcaaccgtgcagaagcag
ctgcagacggctgccaggtcaaaggtcatcgtcgacagttcgcccagcactccgacttcc
aggtccacgtctccgaagccggaggatcaggacaagtccggcggccgaggagcgactcgc
ctcttcaggtcggcgtcggcctcctcgccgaggttcttctcctccatcagagagatgttt
gacaggaagagaaggggtcactcggtccgcagcctggaggaggacctgccgtttcccgtt
ggaatctgtctatcagccagagttcctgtcagaccgctgcaagtcctggaagcccatgag
caagggatcaacgcggtgcggttcagcttcggctcggacctgctggccaccggcgggacg
gaccgggtcatcaagctgtgggacgtccgggcaggctcgctgactcacagagccacgctg
gacggcagcacggaggggatcacctgcgtggagttcgaccacacgggccgcaggatcctg
gcggcgtcgcacaacaagtccgccctgctgtggcgcctggacgactccgtccccaaggtg
actctgacgggtcacagcaggaaggtgacggcggccaggttcacctgcgtcccccaccag
gtggtgacaggaagcaccgaccggaccgtccggctctgggacctgaacagagccgcctgt
gtccagcagggggaggtggcgtcgttctgcagcgacctggtctgttctgacagccgcatc
atcagcggacattttgactgcaagatcagagtctgggacagcaggacggtgagctgcgtt
caggagcttccctctcagggcagagtcacctcgctggacctgagctccgaccggcgccag
ctgctcagctgttgccgtgacgactgcctccagctgctggacctgcgctggaccaacgac
cggatgtgcttcagagccgacggcttcaagtgcggcggcgacagcaccaaggcggtcatc
agcccggacggatgctacctggcggccgggtccgctgacggagccgtttacatctggaac
gtctccaccgggggcctggaggcccgcctccccgaccagcacagctcgtccatcaccgcc
gtgtcctggtctctctccggagaacacttcgtcagcgtggacaggagccggcgggccgtc
ctctggagtgacatctga
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