Poecilia reticulata (guppy): 103475348
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Entry
103475348 CDS
T05149
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04080
Neuroactive ligand-receptor interaction
pret04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103475348
04082 Neuroactive ligand signaling
103475348
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pret04040
]
103475348
Ion channels [BR:
pret04040
]
Ligand-gated channels
GABA-A
103475348
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
103475348
NCBI-ProteinID:
XP_008425135
UniProt:
A0A3P9NCT9
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All DBs
Position
LG14:1415869..1445030
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AA seq
465 aa
AA seq
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MSIGSLRGMAFVLTSLFLFCASTVCETQHSETSIYLDNITRILDRLLDGYDNRLRPGFGG
PVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEILRLNNLMVSKIWT
PDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLMNFPMDGHACPLK
FGSYAYPISEIVYTWKKGPLSSVEVPQESSSLLQYDLIGQTVSSERLKSNTGEYVIMTVH
FHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLTMTTLSISARHS
LPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAAAIKAAAQEAAAAA
AVVPAASTGTEGDVASVDANSVLKKRMNSAPVFDRPAKTFPNPPVNAQAFLQQGSAVPAN
NVLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEMSRDTV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcgggtctttgcgaggcatggctttcgttttaacgagcttgttcctgttttgt
gcgagtactgtttgtgagacgcaacacagtgaaaccagtatttatttggataatatcacg
cgtatattggatagattactggatggctatgacaacaggctgcgacctggatttggaggt
cccgtcacggaggtcaaaactgacatctttgtcaccagctttggtccagtttcagatgta
gagatggagtacaccatggatgtgttctttcgtcagacgtggattgatgagcggctcaaa
ttcgaaggcccaattgagatcytgcggctaaacaaccttatggtcagcaaaatctggacc
cccgacacatttttccggaatggcaagaggtcaatctctcacaacatgaccaccccaaac
aagctgttccgcatcatgcaaaacggaaccatcctctacaccatgagattaactatwaat
gcagagtgtccaatgcgcctcatgaacttcccaatggacggccatgcctgcccactcaaa
ttcgggagctatgcataccccatcagtgagattgtgtacacatggaagaaaggaccttta
tcttctgttgaagtcccacaggagtcatccagcttgttgcagtatgacctcattggtcag
actgtatcaagcgagaggctgaagtccaacacaggtgaatatgtcataatgactgtccac
ttccatcttcaaaggaaaatgggtttcttcctgattcagacctacattccctgcataatg
actgtcattctggcacaagtttccttctggattaacaaggaatcagttccagctcggact
gtctttggcatcaccactgtcctgaccatgacaacattaagcatcagtgcacggcactcc
ctccctaaagtttcgtatgccaccgcaatggattggttcattgctgtgtgctttgccttc
gtcttctctgccctcattgagtttgcggctgtcaactacttttcaacactccaagccaac
cgagagctgcgaaaggcagcagccataaaggcagccgctcaagaagcagcagcagctgca
gccgtggttccagcagcaagcacagggacagagggagacgttgcttcggtggatgccaat
agtgtattgaagaagaggatgaactctgcaccggttttcgatcgccctgcaaaaactttc
cccaaccctcctgtcaatgcccaggcgttcctccagcaaggctccgccgtyccagccaac
aacgtcctgacaggcaccagcatcattgacaaatactcacgcatccttttccccctttcg
tttggcgcctttaacctggtctactggatcgtttatctcaccaaggacaccatggagatg
tcaagggatactgtctaa
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