Poecilia reticulata (guppy): 103475482
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Entry
103475482 CDS
T05149
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pret03009
]
103475482 (ddx52)
Enzymes [BR:
pret01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103475482 (ddx52)
Ribosome biogenesis [BR:
pret03009
]
Eukaryotic type
90S particles
Helicases
103475482 (ddx52)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Ribosomal_S7e
Motif
Other DBs
NCBI-GeneID:
103475482
NCBI-ProteinID:
XP_008425358
UniProt:
A0A3P9PTI1
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Position
LG14:7462492..7469451
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AA seq
654 aa
AA seq
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MDTFELFRKLGAGAKFDLKRFGQDAARFKVARSQGREASLDSLSAINYFGTGAANGAQSV
DEEGIESGDSEVGGKRKRKERPGEVGHKSKRTESRRVEEDGGGEPLTETQGGGITWTSSL
DRKIQDEQKDGTEKFSLKRLKHLHQEKVNRIRAQHRINVHGCDVPDPVCSFEELQSEYRL
NPRVLQNLKDAGLNTPTAIQMQAIPLMMHARELLACAPTGSGKTLAFSLPLLAHLQQPTN
LGFRALVISPTRELASQTYRELLRLSDGVGFRVHIIDKASLAAKKYGPQSNKKYDILVST
PNRLIYLLNQDPPGINLSSVEWLVVDESDKLFEDGKTGFREQLATIFLACSNAKVRRAFF
SATCTPEVEKWCRLNLDNLVSVNIGHRNTAVETVEQELLFVGEENGKLVAMRNIIKKGFL
PPMLVFVQSIERARELFHELVYEGINVDVIHAERTQQQRDNVVNSFRSGKIWVLICTALL
ARGIDFKGVNLVLNYDFPTSAVEYIHRIGRTGRAGHQGKAITFFTENDKPLLRSIANVIK
QAGCPVPDYMIGFKKIHSKVKRRLEKKPPSRSTICTTPRFLMKKKVKAEKKEHKEASKSK
QKGENGAQTAEQQNKKKKTKGKVQKAGQKKGKPKAAVQKGGSKLGGAKLKKKNR
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggacacattcgagctgtttaggaaactcggagccggtgctaaatttgacttaaagaga
tttggtcaagatgctgctcggtttaaggtggccaggtctcagggcagagaagcgtcgctg
gattccctgtctgcgatcaactacttcggcacaggagcagctaatggagcccagagcgtg
gatgaggagggcatcgaaagtggagactctgaagtaggaggcaaaagaaaacgcaaagag
cgaccgggagaagtgggacacaaaagcaagaggacggaaagcagaagggtggaggaggac
ggtggtggtgaaccactgactgagacccagggaggtggcatcacctggacctcctccttg
gacagaaagatccaagacgaacagaaggatgggacggagaaattctcgctcaagaggctg
aagcatcttcatcaggagaaggttaatcgcattcgcgcgcagcaccgtataaatgtccat
ggctgcgatgtgcccgacccggtttgctcgtttgaggagcttcagtccgagtatcgtctc
aacccacgcgttcttcagaacctcaaggacgcaggactgaacacgccaacggcgatacag
atgcaggccataccgctcatgatgcatgctcgggagctgttggcgtgcgctccgaccgga
tctggaaagactttggccttctctcttccgctgctcgcccacctgcagcagcctacaaac
ctgggcttcagggctctggtcatctccccgaccagagaactggccagccagacctacaga
gagctgctgcgcctgtcagacggagtcggctttagagttcacatcatcgataaagcttcc
ctggcagctaagaagtacggtccacagtcaaataaaaaatatgacatactcgtcagcact
cccaacagactgatctaccttctcaatcaggatcctccaggaatcaacctgagcagtgtg
gagtggctggttgtggacgagtccgataagctgtttgaggacgggaagacgggcttcagg
gagcagctggcgaccatttttctggcatgttccaacgccaaggtgcgcagggctttcttc
agcgccacctgcacgccggaggtggaaaagtggtgccgcctgaacctcgacaacttggtt
tctgtcaacatcggacacagaaatacagcggtggagacggtggaacaggagctgctgttt
gtcggggaggagaacggaaaacttgtggccatgaggaacatcatcaaaaaaggtttcctg
cctcccatgctggtgttcgttcagtccatagagcgagcgcgggagcttttccacgagttg
gtgtacgaagggatcaatgttgacgtgatccacgcagaacgaacacagcagcagagggac
aacgtggtgaacagctttcgctccgggaagatttgggtgctgatctgcacggctctgctc
gccagaggaatcgacttcaaaggagtgaacctggtgctgaattacgacttccccaccagc
gccgtggagtacattcacagaatcggccgaacgggcagagctggacatcaagggaaggcc
atcaccttctttacagaaaatgacaaaccgctgttgcgcagcattgctaatgttataaaa
caagctgggtgccctgtgccggactacatgattggcttcaaaaagatccacagcaaagta
aagcgaagacttgagaagaaacctcccagtaggagcaccatttgcacaacccctcgcttc
ctcatgaagaagaaagtcaaagctgagaaaaaagaacataaggaagcgtcaaagagcaaa
cagaaaggagagaacggggctcagacagcggaacagcagaacaagaagaagaagacaaaa
ggaaaagttcaaaaagcaggacagaaaaaaggaaaacctaaagcagcagttcagaaagga
ggatcaaaattaggaggagccaagttaaaaaagaaaaacagatga
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