Poecilia reticulata (guppy): 103475553
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Entry
103475553 CDS
T05149
Symbol
trpc4
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pret04040
]
103475553 (trpc4)
Ion channels [BR:
pret04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103475553 (trpc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
Egg_lysin
Motif
Other DBs
NCBI-GeneID:
103475553
NCBI-ProteinID:
XP_008425498
UniProt:
A0A3P9P794
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All DBs
Position
LG14:complement(5611146..5644723)
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AA seq
956 aa
AA seq
DB search
MSQLYYRRTDSSSYRDRIPLRIVRAESELSPLEKAYLGAVEKGDYASVKQALEEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFSVYVGDALLHAIRKEVVGAVELLLNHKK
SSGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVSMPQPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALSSPSLIALSSEDPFLTAFRLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELEMILNYRDDANLLEEEGNNDLARLRLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKFITCVFIGLLYPVFALCYLIAPKSRYGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIVTTEQDRQDRQGPPPTTVEWMILPWVLGFIWAE
IKQMWDGGFQDYVHDWWNLMDFVMNSLYLATISLKIVAYTKYSGTKPRNQWEMWHPTLVA
EAVFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQL
YFYYETKASEEKGKCKGIRCVEQNNAFSTLFETLQSLFWSIFGLISLYVTNVDPDHQFTE
FVGATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGATVP
TPFNIIPSPKTFWYLVCWIKRQVCKRTRSKRTESFGTLGRRAAENVRINHQYQEVLRNLV
KRYVAAMIRDAKTEEGLTEDNFKELKQDISSFRYEVMGMMKTGKPALQGAMASSSSVESS
LAYPNSSLKISPGLPASQAKSKLNRFKITASILKQASSLASPRPPEASNGLPNGLLASDE
GCSEPSSQWRNCSKDISDFSLFQKRHWSGKEVPSGSGEVLREMYSLSEEAGESGGSATEE
ESKEVTAKAEGELLVNKSDKEFPENKEELSINRSLECEDKQPEEEKKKSSSTRKEP
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctgtattaccggaggactgacagctcttcataccgggaccgcatcccgtta
cgaattgtgcgggctgagtcggagctgtcgccgttagaaaaagcctacctcggagctgtg
gagaagggagactacgccagtgtcaaacaagccctggaggaggcagagatctactttaag
atcaacatcaactgcattgacccacttggccgcacggctctgctcattgccattgagaat
gagaatttggaaatcattgagctattgctgagcttcagtgtctacgtcggtgatgccctg
cttcacgctatccgcaaggaagtggtgggagccgtggagctgctgctgaatcataagaag
tcaagtggaggcatgcaggttccccctatcttattggacaagcagttttctgacttcacc
cctgacatcactcccatcattctcgctgcacacaccaataactatgaaattatcaagctt
ctggtgcagaaaggtgtgtctatgccacagccacacgaggtgcgctgcaactgtgtggag
tgtgtgtctagttcagacgtggacagcctgcggcactctcggtctcgcctcaacatctac
aaagcgctgtcgagtccctctctaattgcgctctccagcgaagatccctttctcactgca
ttcaggctcagctgggagctgcaggagctcagcaaggtggagaatgagttcaaatctgag
tatgaggagctgtctcagcagtgtaaacagtttgctaaagacttgctggaccaaacaagg
agctccagagagctggaaatgatcctgaactacagagacgatgccaacttactggaagag
gagggcaacaacgaccttgcaagactcagactagcaatcaagtaccatcaaaaagagttc
gtggctcagccaaactgtcagcagctcctggcctcgaggtggtatgatgagtttcccggg
tggaggcggcgccactgggcaggaaaattcatcacctgtgtctttattggcctcctctat
cctgtttttgccctttgttacctcatcgcacccaagagtcgctatggcctcttcatccgc
aagcccttcatcaagtttatctgccacactgcatcgtacctgacctttctgttcctgctg
ctgcttgcctcccagcatattgtcactacagaacaagacaggcaggaccgacagggccct
ccgccaaccactgtagagtggatgatactaccatgggtgctgggatttatttgggcagag
atcaagcaaatgtgggatggtggtttccaggactacgtccatgactggtggaacctgatg
gactttgtcatgaactctctttacctggctactatatccctcaagattgtagcctacacc
aagtacagtggtactaaacccaggaaccagtgggaaatgtggcaccccactttagtagct
gaggcagtgtttgccattgcaaacatattcagttccctgcgcctcatctccctcttcacc
gctaattcccatctggggcctctgcagatctcactcggccgaatgctgctggatattctg
aaattcctttttatttactgtctggttcttctggccttcgctaacgggcttaaccagctg
tacttttactatgagacaaaagcttcagaagagaaaggaaaatgcaaggggatccgctgt
gtagagcagaacaatgctttctccacgttgtttgagaccctacaatcccttttctggtct
atctttggactaatcagcctctacgtaaccaacgtggatccagaccaccagtttacagaa
tttgttggcgctaccatgtttgggacgtacaacatcatttccctggtggttctcctcaac
atgctgatagccatgatgaataactcttaccagcacattgctgaccatgcagacattgag
tggaagtttgcaagaacaaagttgtggatgagttactttgaggagggcgccacggttccc
acccctttcaacattattccgagccccaaaacattctggtacctcgtgtgttggatcaag
agacaagtgtgcaagaggactcggtccaagagaaccgaaagctttggaactcttggaaga
cgggctgcggaaaacgtgaggataaaccatcaatatcaggaggtattgaggaacctggta
aaacgttatgtggctgcaatgatcagagatgctaagacagaggagggcctgactgaagac
aacttcaaggagctgaaacaagatatttccagcttccgttacgaggtgatgggcatgatg
aagacgggaaagcctgctctacagggcgcgatggccagttccagttcagtggaatccagt
cttgcctatccaaattcctcactcaaaatttcccctggccttccggccagccaggcaaag
agcaagctcaaccgattcaagatcactgcatccatcctcaaacaagccagctcccttgct
tcacccaggcctcctgaagcatccaacggtcttcctaatggactcttggcgtcagatgag
ggttgcagtgaaccgtcgagccagtggagaaactgctccaaagatattagtgactttagt
ttgtttcaaaaacgccactggagtggtaaagaagtcccatcagggtcaggcgaggttctg
agagagatgtactctctgtcagaggaggcaggagagtcagggggttcagccacagaagag
gagagtaaggaggttacagccaaggctgaaggagaactgctggtgaataaatcggacaaa
gagtttccagagaataaagaagagctaagcattaacagaagccttgaatgtgaagataaa
caacctgaagaagagaaaaaaaaatctagctccacaagaaaggaaccatga
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