Poecilia reticulata (guppy): 103475593
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Entry
103475593 CDS
T05149
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03030
DNA replication
pret03420
Nucleotide excision repair
pret03430
Mismatch repair
pret03440
Homologous recombination
pret03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103475593
03420 Nucleotide excision repair
103475593
03430 Mismatch repair
103475593
03440 Homologous recombination
103475593
03460 Fanconi anemia pathway
103475593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pret03000
]
103475593
03032 DNA replication proteins [BR:
pret03032
]
103475593
03400 DNA repair and recombination proteins [BR:
pret03400
]
103475593
Transcription factors [BR:
pret03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103475593
DNA replication proteins [BR:
pret03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
103475593
DNA repair and recombination proteins [BR:
pret03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
103475593
MMR (mismatch excision repair)
103475593
DSBR (double strand breaks repair)
HR (homologous recombination)
103475593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
Extensin_1
DUF223
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
103475593
NCBI-ProteinID:
XP_008425591
UniProt:
A0A3P9NZV9
LinkDB
All DBs
Position
LG14:complement(4680550..4717366)
Genome browser
AA seq
674 aa
AA seq
DB search
MTAKLTQGAVEALVNGSHVEKLVLQLLNIRQINTTGVPRYRLMMSDGQHYLSSFLMATQL
NHLAEEKLLVPHCVCLLKRMTNNTLSDGRHVVVVVDMDVLKSAEDAGGKIGNPTSYSTDD
KLSSPNKVSSTTSEPSSTSDAEVPGPSNSKGWGKGSTGKAPVKTSPMKTSPMKGAPLKTS
PMKASPMMTSPMKGSPMKASPMMTSPMKGSPMKGSPMKGSPMMTSPMKGSPMKASTSSPG
SVPKVMPIATLNPYNSKWTIRARVTNKSNIRNWSNSRGEGKLFSFEVVDESGEIRITAFN
NEVDKFFALLEQGKVYYISKATLKVANKQYTTLKNDYEMTLHAHSSIVPCTDSQDVPVMQ
CDFVPIGELENRDKDSIIDIIGVCNSAEDVSRITTKTSREVSKRAINLIDTTGKMVTVTL
WGEEAEKFDDSGQPVVAIKGARLSDFRGISLSALFSSTIMVNPDLPEAFRLRAWYDREGH
AVDSQSLTETVSVAVGSKMNWKTLSDVKNENMGHREKADYFSCVATIVYMRKENCLYQAC
PSSDCNKKVIDQQNGFYRCEKCNREFPNFKYRLLLSANLADFGDNQWVTCFQETAEVLLG
RKAEELGQLRETDEAEFDEVFQKANFSTHIFKNRVKLETYNDESRVKVTVMEVLPVDHRV
YSRRLLSNIRKLAH
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgaaactaacacagggggcagttgaagccctggtcaatggatcccatgtagag
aaactggtgctgcaattactgaacattcgtcagattaacaccacaggtgtgcccaggtac
cgcctcatgatgagtgatggtcagcactacttgtcttccttcctgatggccacccagttg
aaccatctggcagaagagaagctccttgtaccacattgtgtgtgtttgttaaaaaggatg
accaataacactttgtcagatggccggcacgtggtcgtcgttgtggacatggacgtcttg
aagtcagcagaagatgctggaggaaagattggaaatcccacctcatattcaacagatgac
aagttgtcatctccaaataaggtgtcatcaaccacctctgaaccatcgtccacttcagac
gctgaggtacctggaccatccaacagcaaaggatggggaaaaggttccactggaaaagct
cctgtgaagacttcaccaatgaagacctctcctatgaaaggggcgcccttaaagacgtca
cccatgaaagcctcaccaatgatgacctctcctatgaaagggtcacccatgaaggcttca
ccaatgatgacctctcccatgaagggttcgcccatgaaagggtcacccatgaagggttca
ccaatgatgacctctcccatgaagggttcacccatgaaggcgtccaccagttcaccaggt
tctgtcccaaaagtgatgcctatcgctaccctcaacccgtacaacagcaagtggactatc
agagccagagtcacaaacaaatccaatatccgtaactggagtaactccagaggggagggc
aagctcttctcctttgaggtcgtggatgagagtggtgaaatcaggatcacagccttcaac
aatgaagtggacaagtttttcgctctgttggagcaaggcaaggtgtactacatctcgaag
gcgactctgaaggtagccaacaaacagtatacgacactgaagaacgactacgagatgacc
ctccacgctcattcatctatcgtaccgtgtacggacagtcaggatgtcccagtcatgcag
tgtgactttgtgcccatcggagagctggaaaaccgagacaaagactccatcattgatata
attggagtgtgcaacagtgcagaggatgtatcccgtatcaccactaagaccagccgggaa
gtctccaagagggccatcaacctaatagacaccactggcaaaatggtgacagtcacactg
tggggagaagaggcggagaagtttgacgactccggacagcctgttgttgccatcaaagga
gctcgcttgtctgattttcggggcatatctctctcagctttgttcagttctacaatcatg
gtcaacccagatttacccgaagccttcagactcagggcctggtatgaccgggaaggtcat
gcagttgacagccagtcgctaacagaaaccgtgtcagtcgctgttggatcgaagatgaac
tggaaaacgctgagcgatgttaagaatgaaaacatgggacacagagaaaaggcagactat
tttagctgcgtggcaactatagtttacatgcgtaaagaaaattgtttgtatcaagcctgt
ccgtcttcagactgcaacaagaaggtcatagaccaacagaatggtttttaccgctgcgag
aagtgtaacagagagttccccaacttcaaatatagactcctactttcagctaacttggca
gacttcggggataaccagtgggtgacatgcttccaggagacagctgaggtcctgctgggt
cgcaaggcagaagagctgggacagctcagagaaacagacgaggcagagtttgatgaagtc
ttccagaaagccaacttctctacccacatctttaagaaccgagtcaagctggagacatat
aatgacgagagtcgggtgaaagtgaccgtaatggaagtacttcctgtcgaccacagagtg
tacagcagacgactcctcagtaacattcggaaactggctcactga
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