Poecilia reticulata (guppy): 103475959
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Entry
103475959 CDS
T05149
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103475959 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103475959 (mid1)
Enzymes [BR:
pret01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103475959 (mid1)
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103475959 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
Ig_DSCAM-DSCAML_C
PRY
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
ZNF512_C2HC
NDNF
AAR2
Motif
Other DBs
NCBI-GeneID:
103475959
NCBI-ProteinID:
XP_008426186
UniProt:
A0A3P9NU88
LinkDB
All DBs
Position
LG2:complement(3347576..3380640)
Genome browser
AA seq
687 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILVSHCATNESVHSIGAFQCPTCR
YVISLSPERGLEGLKRNVTLQNIIDRVQRASSSAGLPLPLAGPHSGPNSPIEEGSNRLAL
VPVSAAMSSPETPPEPVQCQFCEQDPPQDAVKTCVTCEVSYCEECLRATHPNKKPFTGHR
LIEPMPDSHLRGLQCLEHEEEKVNMYCVTDDQLICSLCKLVGRHRDHQVAALSDRYEKLK
QALDSNLSNLIKRNNELESLMGKLIQTCQHVEVNASRQEGKLMEECDVLIDIIQQRRQII
GSKIKEGKAQRLRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKSINERVS
MATASTQVLIPEIHLTDTFDTFALDFTREKKLLENLDYLTAPSAPCIREELCTASYDTIS
VHWTSDDEFTVVSYELQYAIFTGQSNIASLCNSLESWMIVPNIKQNHYTVHGLQSGTKYI
FVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHSQD
RFSSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAIGIAYKSAPKHEWIGKNSASWVLCRC
NNSWVVRHNSKELAIEPSPQLRRVGVLLDYDVGYVAFYDAVGSQHLHTFHVSFVQPVCPV
FNVWNKCLTILTGLPIPDHLEGLEPDN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggagtcagagctgacctgtccaatctgcctggagctctttgaagacccg
ctgctgctcccttgtgcccacagcctgtgcttcggctgcgcccaccgcatcctcgtctcc
cactgcgccaccaacgagtccgtccatagcattggcgcttttcagtgccccacttgtagg
tatgtcatttccctgagtccggagcgtggattagaaggactcaagagaaacgtgaccttg
cagaacattatcgatagagttcaacgggcctcatcctcggctggccttcctctgccgctg
gccggtccccacagtgggcccaactctcccattgaggaagggagcaaccggctggctttg
gttccggtcagtgccgccatgtccagcccggaaactccgccggaaccagtccaatgccag
ttctgcgagcaggacccaccccaggatgccgttaagacatgtgtgacgtgcgaagtgtcg
tactgcgaggagtgcctcagggcaactcacccgaacaagaaaccattcaccggtcaccgg
ctcattgagccaatgcctgactctcacctcagagggctccagtgcctggagcatgaggag
gagaaggtgaacatgtactgtgtcactgacgaccagctgatctgctcwctgtgcaaactg
gtcgggaggcacagggatcaccaggtggcagccctaagygaccgctaygaaaaattaaag
caagcacttgactccaacctgagcaacttgatcaagaggaacaacgagctggagtcgctt
atggggaagctgatccagacttgtcaacatgtcgaggtaaacgcatcacgccaggagggc
aagctcatggaggagtgcgacgtcctgattgacatcattcagcagaggcggcagatcatt
ggcagcaagattaaagaggggaaggctcaaaggcttcggaagctggcccagcagatttcc
aactgcaagcagtgcatagagagatcctcggccctcatcacacaggctgatcagacrctg
aaggaaacggatcatgctcgcttcctgcagacggccaagagcatcaatgaaagggtttcc
atggcaacagcatcaacccaggtgctgattccagagatccacctgacagacacgtttgac
acgtttgctctggatttcaccagagagaagaagttgctggagaatctggattacctcaca
gctccaagcgctccgtgcataagggaagagttgtgcacagcttcctatgacacaatcagt
gtccactggacatctgatgatgaattcacagttgtktcctatgagctgcagtatgccatc
ttcaccggacagtctaacatcgccagtctatgtaactcattagaaagttggatgattgtt
ccaaacatcaagcaaaaccactacacagtgcatggtttgcagagcggcaccaagtacatt
tttgttgtcaaggccattaatcaagcaggaagcagaagcagtgagccggggactctgaaa
accaacagccagccattcaaactggatccgaaatctgctcacaagaagctcaaggtttcc
catgacaacctcacagttgagcgggacgaaaccacgtccaagaaaggccacagtcaggat
cggttctccagccagagcagctacggcgtggtgggaaatgtctacatcgacagtgggcgt
cactattgggaggctctgattggagggagtacatggtacgctattggcattgcctacaag
tctgcccccaagcacgagtggattggaaagaactcggcttcttgggtgctctgccgctgc
aacaactcctgggtggttcgtcacaacagcaaggagctggccatcgaaccctcaccccaa
ctscggcgggtcggggtcctgctggattaygatgtcggatatgtggctttttacgacgcc
gtcggttcccaacacctacacacctttcacgtctcctttgtccagcctgtgtgtcctgtg
tttaatgtatggaataagtgtctgacgatactcactggtcttcctatcccagaccatcta
gagggactagaacccgataactaa
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