Poecilia reticulata (guppy): 103476039
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Entry
103476039 CDS
T05149
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X2
KO
K04650
nuclear receptor co-repressor 1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
103476039 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pret01009
]
103476039 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pret03036
]
103476039 (ncor1)
Protein phosphatases and associated proteins [BR:
pret01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103476039 (ncor1)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
103476039 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
DUF4798
LOB
Motif
Other DBs
NCBI-GeneID:
103476039
NCBI-ProteinID:
XP_008426292
LinkDB
All DBs
Position
LG14:complement(16257312..16323152)
Genome browser
AA seq
2317 aa
AA seq
DB search
MSSSSGYPPSQGSFSSEQSRYPSHSGVQYAFTGSRHQQDFPVPDYRTHMQDPQGRRRLSL
LSEFHPGVERPPERRHHDYDRQFHSVTAQAEHEALEAKRPRMETVAEAHINRTPPTAGGI
VLPMPHTVQDSLRATVEVKKESPFTVKVESPSQGGPALHMGEEQDTSPSKLSKEELIQSM
DRVDREIAKVEQQISKLKKKQQQLEEEAAKPVEPEKPATPPPVEHKHRSIVQIIYDENRK
KAEEAHKILEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQ
KICQRYDQLMEAWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQR
GTGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLMD
DPMKVYKARQFMNVWTEHEREIFKEKFIQHPKNFGLIASYLERKCVADCVLFYYLTKKNQ
NYKALVRRNYGRRRGRNQQITRPSQEDKSEDKTEEDKAEKSEKKEDEEKKDEEEKDEKED
SREIGKDKDKCDGGEDEDGKEQNTPRGRKTANSQGRRNRRITTRSMANEAASVAAEDTPL
PASEPALPDPPQLPKSDQAQKGMKEPAKSLTPVAADANKAGAGESGETSRWTEEEMEVAK
KGLVEHGRNWTAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKKDTRRARADTSQGE
GQATASPDDDEDNADDSEAGDNSSDTESAPSPSQPDSSKLVDSKRPESTAGEAPGADQDK
GQASNGKSADPSYGELRVKEEKSPESESGSQEEKVKLSSFPGPVHPKIEPQDMDMKTGEV
QVKVEPEIKEKGEKGEPGDRQRELHSDNDSSATCSADEDVEAEPDRQRIYTMEKPSLLSP
PGTVLMPSPKQAQLNIQQLQHRAAVIPPMVPGSYGPGGIPISGLTMLQHQIKAAHDSAHQ
EEKQRQDQGDLERRPHFNTRSPSVLDRDVLHPNPSQLVQSMSDGVRLPFNRHSRPPNIPS
PPPLIPTNKPTDKPSFIQGGSISQGTPGTYLPSHAIYGPEGTKSSGGSISLGLPRQMDPN
KPGAVVSSIQDGRGNPAKVGEGLAFRGSITQGTPALSQPSIAADLLKGTITKLATEDLGS
PDKARGEQLAKVIYEGKSGHILSYDAIKNPRENTRSPRTGHDLKRTHDMMEGPMGRAHHG
REGAPFEGLISRALPREGHHGDSKERALIPGSIMQGTPRTTADTYEDTVKYGKLIKTESP
PIRTFEETIGKGKPYEGVNTIKERGRSIHEIPRQDQPGQDMCKTPDLPDRRVIEGSMSQS
YSLGQPTIKHNVKSLITSPSKLPHSMPQLEAMERPKYEEGKAVRHSVVNSTASVLRSTHQ
EAGKSQHSPSMYEDASARRTPVNYSNNPVSRGSPMLGRGSEGGMSSAKSAAHDRKSAMTP
TQRDSIPSKSPVSVGDPVASHSPFDPHHRPLVPGEVYQTHLPPHLDPTLAFRHRGLDPAF
MFSRQPSPTGYHNTYQLYTMENTRQTILNDYITSQQMHGIPRPDMARGLSPREQPVAIPY
PPPPRGIIDLTQMPPTILLPHPGGTGTPTLERAYLSGAQPPFPPRHFNPASISPGHPVHL
AASAEREREQQEKDREQKERDIREREIRERERTNEYMRGGALEQPGRPGSRGYLHSPSPS
LRTQDVVVQQRPSIFQGKSVITSLIPHPPVATSASQSSSRYSTAADALAALVDAAVSAPQ
MDVTKIKESKHERDDEMSSSAVSRRGSILSDQQQEADRRSLHSPYNAMSLPGGKPHPAYA
EGPGAAGGKEKGPQTKSRIEEELRTHGKTTITAANFIDVIITRQIASDKESRERGSQSSD
SSSSLSSSRYDNTAGGAIEVISPASSPVPPQQDKAEDGQQAAVAMRTYDMGRYRSSAEPP
QPPSSQADSYSQVPKTHRVMTLADHISHIITQDFARNQDPPLSSSAPTTFQSSIPQVSSS
GRVKAPSRYSPENQPPHHQRPSSRVSPENAPDKSRARPGKSPDRGGRQMENYEPISPPQG
YQGMDKQEAGGPPSQRRDTDNSEIRSDSRSPGSVSYLPAFFTKLESTSPMVKSKKQEIFR
KLNSTSGVGDSDVGNAQPGTEIFNLPAVTSSSSINLRNQSFNDPASNLGLEDIIRKALMG
NLEERQEEHQGGGAVVMNNAPGTGGDTRQEASPSPSMGKQKQGKANSRKSKSPNLGQAYP
GGERPSSVSSVHSDGEYHRQTQAQWTWEERPPSTGPMPFPYNPLTLMSTPPTSMASASIQ
SQQQQQQQQQPPPARGQQRVWQSLLSEQYETLSDSDD
NT seq
6954 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagctcgggctacccccccagccaggggtcgttcagcagcgagcagagccga
tacccgtcacactctggtgtccagtacgccttcaccggatcgcgccaccaacaggatttc
cccgtcccagactaccgcactcatatgcaggatccacagggccgcagacggttgtccttg
ctctccgagttccaccccggagttgaaaggcctccggagaggcgccaccatgattacgat
cggcagtttcactccgtcacggcgcaggcagagcacgaggccctggaggccaagcgccct
cgcatggagaccgttgccgaggcccatatcaaccgcacccctcccactgctgggggtatt
gtgctgcccatgccccacactgtacaggacagcttaagagccactgttgaggtcaaaaag
gagtctccgttcaccgtcaaagtggagtccccgtcgcagggaggacctgcgctgcacatg
ggggaagagcaggacacgtctccctccaagctgtccaaggaggagctgatccagagcatg
gaccgcgtggacagggagattgcgaaagtggaacagcagatttccaagctgaagaaaaag
cagcaacaactcgaggaagaagcagcgaagcccgtggagccagaaaagccagcaacccct
cctccggtggagcacaagcaccgcagcatcgttcagatcatctacgatgagaacaggaaa
aaagctgaggaggctcataaaatattggaaggtcttggccccaaagttgagctgcctttg
tacaaccagccgtcagacacaaaggtgtaccacgacaacatcaaaacaaaccaagtcatg
cggaagaagctgattttgttttttaagaggaggaaccacgcacgtaaacaaagggaacag
aagatctgccagcgctacgaccagctgatggaggcatgggagaagaaggtggagcgcatg
gagaacaaccccagacgtaaagccaaggagagcagaacacgggagtactacgaacggcag
ttccccgagatccgcaagcagcgagagcagcaggagcgcttccaaagagttggacaaaga
ggaacgggtctttccgcaacaatagcgaggagcgagcacgagatctctgaaatcatcgac
ggtctctcggaacaggagaacaatgagaaacaaatgaggcagctgtcggtcatccctccc
atgatgtacgactcggagcagaggcgggtgaagttcatcaacatgaacggcctgatggac
gacccgatgaaggtgtacaaagctcggcagttcatgaacgtttggacggaacacgagagg
gagatttttaaggagaagttcatacaacatcccaagaattttggtttgattgcctcgtat
cttgaaaggaagtgtgtcgctgactgtgtgctgttttactacttgactaaaaagaaccaa
aactacaaggcgttggtcaggagaaactatggcagaaggagaggacggaaccagcaaata
acacgtccctcacaagaagacaagtcggaagacaagaccgaagaggacaaagctgagaag
tctgagaaaaaagaggacgaggaaaagaaggacgaggaagagaaagatgaaaaggaggat
tctcgggagattggcaaggacaaagacaagtgtgacggtggggaggacgaggacggaaag
gagcaaaacacgccgcgtggcaggaagactgccaacagccagggccgccgcaatagaagg
atcaccacacgctccatggccaatgaggccgcgtccgtcgcagctgaggacacgcctctt
cctgcctctgagcccgccctgccagatcctccacagctccctaaatctgatcaagcgcag
aagggaatgaaggagcccgcaaagtcactcactccggtagcagcagatgctaataaagct
ggcgctggtgaaagcggagaaacttctcgctggaccgaggaggagatggaggtcgccaaa
aaagggctcgtggaacatggcagaaactggacagccatcgccaaaatggtgggcaccaaa
agcgaggcgcagtgcaagaacttctatttcaattacaagcggcgtcacaacctggacaac
ctgctccagcagcacaagaaggacactcgcagagctcgcgctgatacgtctcaaggggaa
ggccaagctacggcgtcacctgatgatgacgaggacaatgcagatgacagtgaagctggt
gataacagctctgatacagagagcgcaccttcgccctctcagcccgactcctcaaaattg
gtcgactcaaagagaccggagagcacggcgggcgaagctccgggcgcagaccaggacaaa
ggtcaagccagcaatggaaagtccgcagacccttcatacggggagcttcgcgtcaaggaa
gagaagagcccagagagcgagagcggatcccaggaagaaaaagtcaagctttcttccttc
cctggccccgtgcatcccaaaatcgaacctcaggacatggacatgaagactggtgaggtt
caagtcaaggtggagcccgagatcaaggagaagggcgaaaagggagagccaggcgatcgg
cagagggagctccactcggacaatgactcgagcgccacctgcagtgctgacgaagacgtg
gaggccgagcctgatcggcagagaatatacaccatggaaaaaccgtcgttgctcagccct
ccgggaacggtgctcatgccctcgcccaagcaagcccagctcaacatccagcagctgcag
cacagggcagctgtcatccctcctatggtgcctggttcttacggtcctggcggcattccc
atcagcggtttaaccatgctgcagcaccagatcaaagcagcgcatgattcggctcaccag
gaagagaagcagcggcaggatcagggcgacctggagcgcaggccacacttcaacacccgc
agcccttctgtcctggacagagacgtcctccatcccaacccctcccagctggtccagagc
atgagcgacggagtccgtctgccgttcaacagacacagccgacctcccaacattccttct
cctccgccgctcattccaaccaacaagcccacagacaagccctccttcatccagggcggc
tccatctcccagggaactcctggcacttatttgccttctcatgccatctatgggccggag
gggacgaagagctccgggggctccatctctctggggctgccacggcagatggaccccaac
aagcccggagctgtggtttcctccatccaggacggcagaggcaacccggcaaaggttggt
gaaggcctggctttcagaggatccatcactcagggcactccggctctgtcccagcctagc
atagctgcagacctcctgaagggcacaatcacaaagctggccacagaggacctgggcagc
ccagataaagctaggggggagcagctagctaaagtcatttatgaaggcaaaagtggccac
attctctcctatgatgctataaagaatcccagggaaaacaccagaagccccagaacaggt
catgacctgaaacgcacccacgacatgatggagggtcccatgggaagagcgcaccatggc
agggagggcgctccattcgagggtctgatcagccgggctttacctagagaagggcatcat
ggcgactccaaggaaagagcgctgatccctggatccattatgcaagggacaccgagaact
accgctgacacgtacgaggatacggtgaaatacgggaagctgataaagacagaaagcccg
cctatccgaacatttgaagagaccatcggcaaaggcaagccctatgaaggagtgaacacc
atcaaagagagggggcgctccattcacgaaatccccagacaggaccaacctggacaggac
atgtgcaagacacctgacctgcctgacaggagggtgatagagggctccatgtctcagagt
tactccctgggccagccgaccatcaaacacaacgtcaagtccctcatcaccagccccagc
aagcttccccacagcatgccccagctggaggccatggagcgacccaagtacgaggagggc
aaggcggtgaggcactctgtagtcaacagcacggcctccgtcctgcgctccacgcaccag
gaggccgggaagtcccagcacagccccagcatgtacgaagacgccagcgctcgcaggacg
cccgtcaactacagcaacaatcccgtctccagaggatctcccatgctgggacggggctca
gaggggggcatgagttctgccaaatccgccgcacatgacaggaagagtgccatgaccccg
acgcagagggacagcatcccatccaagtcgcctgtgtcggtgggcgaccctgtggcctcc
cacagcccgttcgaccctcaccaccggcctttggttcctggagaggtgtatcagacacac
ctgcccccacacctggaccccaccctggccttccgccacagaggcctcgatcctgcgttc
atgttttcccggcaaccctcaccaaccggctaccacaacacctaccagctgtacaccatg
gagaacactcggcagaccatcctcaacgattacatcacgtcgcagcagatgcatggcatc
cctcggcccgacatggccagagggctgtcgccgcgggaacaacccgtcgcaatcccgtac
ccgccgcctcctcgagggattattgatctaacccagatgcctccaactatcctgttgcct
caccctgggggaacaggtactcccactttggaacgcgcctacctctctggagctcagccc
cctttccctcctaggcatttcaacccagcctccatatcgccaggccatccagtccacctt
gctgctagtgcagagagggagcgggagcagcaggagaaggaccgggaacaaaaggaaagg
gacatcagagagcgggagatcagagagcgggagcgcactaatgaatacatgcgtggaggc
gccctggagcagccgggccggccagggagccgaggttatctgcattccccttctccatcg
ctccggacccaggatgtggtcgttcagcagcggccgagcatcttccagggaaaaagtgtc
atcacctcactaataccccacccgcctgtggctacatcagcgtcccagagcagctcacgc
tacagcacagcggctgacgccctggctgcgctggtggacgccgcggtctccgctccgcag
atggacgtcaccaagatcaaagagagcaaacacgagcgggacgatgaaatgtcttcgtcg
gccgtgtcgcggcggggatcgatcctctcggatcagcagcaggaagcagacaggcggtcg
ctgcactcgccgtacaatgccatgtctctcccgggcggaaagccgcatccggcttacgcc
gaggggcccggggccgctggggggaaggagaagggtcctcagacaaagtcccgcatcgaa
gaggagcttcggactcacgggaagacgactatcaccgccgccaactttatcgacgtcatc
atcacgcggcagatagcttcagacaaagagtcgcgggagcgaggctctcagagctccgac
tcttcaagcagcttgtcatccagtcggtatgataacactgctggaggagccattgaggtt
ataagtcctgctagttccccagtcccgccccagcaggacaaagcagaagacggacaacaa
gcagcagttgccatgcggacctacgacatgggccggtaccggtcgtctgcagagccgccg
cagcccccctcctcccaggcagacagctactcacaggtccccaaaacccacagagtcatg
accttggcagaccatatttcgcatataattacccaagacttcgccaggaatcaagacccc
ccgctctcttcgtcagcgcccaccacattccagagctccatcccacaggtgtcctcttcg
ggtcgggtcaaagccccgagccgctacagtcctgaaaaccagcctccacaccaccagaga
ccctccagtcgggtttctccagagaacgccccagacaaatccagggccagacccggcaag
tctccggaccgaggaggcaggcagatggagaactacgaacccatctctcctccacagggg
taccaaggcatggacaagcaggaggcgggtgggccgccgtcccaaaggcgggacactgac
aactctgagatcaggagtgactcacggtccccaggaagtgtcagctacctgcctgctttc
ttcaccaaactggagagcacttcgcccatggttaaatccaagaagcaggaaatctttcgt
aagttgaactccacctctggtgttggggattctgacgttggaaatgctcagcctgggaca
gagattttcaacctgcctgctgttaccagctccagcagcatcaacctgaggaatcagtcg
ttcaacgacccggccagtaacttgggcctggaggacatcatccgcaaggctttaatgggc
aacttggaggagaggcaggaggagcaccagggaggaggagctgttgtcatgaacaacgca
cccggcacgggcggcgacacccgacaggaggccagcccgtctcccagcatggggaaacag
aagcagggcaaagcaaacagccggaagtccaagtcgcccaacctgggtcaggcctaccca
ggaggggagcgtccgtcgtcagtgtcctccgtccactctgacggggagtaccacagacaa
acccaagcacagtggacctgggaggagcgacctccgtccacaggtcccatgccgtttcct
tacaaccctctgaccctgatgagcacaccgcccacgtccatggcctcagcctccatacag
agccagcagcagcagcagcagcagcagcagccgcccccagccagggggcagcaacgagtg
tggcagtctctgctgtcggagcagtacgagaccctgtccgacagcgacgactga
DBGET
integrated database retrieval system
