Poecilia reticulata (guppy): 103476072
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Entry
103476072 CDS
T05149
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04080
Neuroactive ligand-receptor interaction
pret04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103476072
04082 Neuroactive ligand signaling
103476072
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pret04040
]
103476072
Ion channels [BR:
pret04040
]
Ligand-gated channels
GABA-A
103476072
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
DUF5874
Motif
Other DBs
NCBI-GeneID:
103476072
NCBI-ProteinID:
XP_008426361
LinkDB
All DBs
Position
LG2:complement(2098341..2121810)
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AA seq
460 aa
AA seq
DB search
MDPHSALNNMTWLVLSLLLLLGCQDSLCQQSSEAQKEEDANEDSTVFTRILDSLLDGYDN
RLRPGLGENVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKGPMEMLPLNN
LLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAECPMQLEDFPM
DAHACPLKFGSYAYPVSEVVYTWTQGAAKSVVVAEDGSRLNQYHLIGQTADTEDIRTSRG
QYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTTVLTMTT
LSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKALEAQHP
KKRDPMVLSKKANNVCSAGVNYTPNLTKDVSISTISNTTSVQLRGSESKLVDPKKTYNSV
SKIDKMSRIVFPVLFGTFNLVYWATYLNREPMVKGVVAST
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcattcagctctcaacaacatgacttggcttgtgctttccctcctgctcctg
ctcggatgccaagatagtctttgccagcagtcgtcggaagctcagaaagaggaggacgcc
aacgaggacagcacggttttcaccaggatcctggacagcctcctggacggctacgacaac
aggctccgcccgggactcggagagaatgtgacggaaatcaagacgaacatctttgtcacc
agcttcggtccagtgtccgacacagagatggaatacaccatagacgtgttctttcgtcaa
agctggaaggacgagcgtctctgcttcaaaggccccatggagatgctcccattaaacaac
ctgctggccagcaacatctggactcctgatacattcttcctcaacggcaagaagtccatc
gctcacaacatgaccacacccaacaagctgctgagactgaaggacgatggaaccctgctc
tacacaatgaggttgacgatctcagcagaatgccccatgcaactggaggactttcccatg
gacgcccacgcctgcccgctcaagtttggcagctatgcctatccagtatcagaggtggtc
tacacatggactcaaggagctgctaagtctgttgtggtggcagaagacggttccaggctc
aaccagtaccatctaattggacaaacagctgacacagaggacatacgcaccagcagagga
caatacactgtgatgatggcgcacttctacctgaagaggaagatcggatattttgtcatc
cagacatacatgccatgtttcatgactgtcatcctgtcccaggtgtcgttttggctcaac
agagagtcggttcccgcacggaccgtgtttggggtgactacggtgttgactatgaccaca
ctcagcatcagcgccagaaactcgcttcccaaagtagcctacgcaacagccatggactgg
ttcattgctgtctgctacgctttcgtcttttcagctcttatcgagtttgccacagtgaac
tacttcaccaaaaggagctgggcctgggatggcaagaaagctctggaagcacagcaccca
aagaaacgagacccaatggtgctctcaaaaaaggccaacaacgtttgctcggcaggtgtc
aactacacccccaacctcaccaaggacgtgtccatctccaccatctccaatacgacgtcg
gtgcagctgcggggctcagagagcaaactagtggaccccaaaaagacgtacaacagcgtc
agcaagattgacaagatgtcgcgaatagtgttccctgtcctcttcggaaccttcaacctc
gtctactgggccacgtacctgaacagagaaccgatggtgaaaggagttgtcgcttccaca
taa
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