Poecilia reticulata (guppy): 103476283
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Entry
103476283 CDS
T05149
Symbol
lig3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103476283 (lig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pret03400
]
103476283 (lig3)
Enzymes [BR:
pret01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103476283 (lig3)
DNA repair and recombination proteins [BR:
pret03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
103476283 (lig3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
RNA_ligase
BRCT_2
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
103476283
NCBI-ProteinID:
XP_008426731
UniProt:
A0A3P9PGH6
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All DBs
Position
LG14:complement(23977931..23995579)
Genome browser
AA seq
997 aa
AA seq
DB search
MQRHLIFLVQKTVCVGRRPFGTLIRCKQPSTFCRTFVISSTSDQQKSLASHKHHLQKRHA
PWTSICRCFSEWPDMSEQRFLVEYAKRGTAGCKKCKDKIQKGIVRIGKIVPNPFSESAGE
MKEWYHVKCIFEKLERARATTKKIEDLTELEGWEELQDEDKELINKHVSDLMAKVNASPK
KKVQAKLNTTGQLMAPPADPSVNAPRKFSGFTAAKAGSSGSSSSPGLSASPAAKAGSSSV
LSTQLCDAQHKDCLFREFRKLCAMVAENNSYNSKTQIIEKFLKKGTGGDKFHGDLYLTVK
LLLPGVVKSVYNLNDKQIVKLFSRIFRSNQEDMVRDLEQGDVSETVRIFFEESKSFPPAA
KSLLTIQEVDASLMRLAQLTKEDEQQSELESIAKKCTSNDLKCIIRLIKHDLKMNAGAKH
VLDAVDPNAYDAFKASRNLGDVIERVLRNQQDASSGSGPRKLLTVEASLMTPVQPMLAEA
CKSIEYAMKKCPNGMYSEIKYDGERVQVHKNGNTFSYFSRSLKPVLPHKVAHFKEYIPQA
FPGGHSMILDAEVLLIDTKTSKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNGVSLMER
PLCERRKFLDDNMVEVPNRILFSEMKHVTRAGDLAEMITRVIREGLEGLVLKDVKGSYEP
GKRHWLKVKKDYLNEGAMADTADLVVLGAFYGKGSNGGIMSSFLMGCYDPDSKKWCTVTK
CSGGYDDAMLARLQKELDVIKISKEPGKIPSWLKIVKNYYPDFIIRDPEQAPVWEITGAE
FSKSEMHTADGISIRFPRMTRIRDDKDWKTATNLHQLRELFRISKENCDFKVTAGPSTSD
DKGSSGGDSGGNSPSSSSSRSAPAKKTSNSTPTKPKALKSKPRTPTSQASSAKKVKSEES
IQSNGQNKTSSQLLQPRNDKTLLDIFSGVKLFLPDSVQDFDRLRRYFVAYDGDLVPDYDS
ASATHTLGDPQGGSRTQRVSPSWIWECIRKRRVVPPC
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgcagagacatcttattttcttggttcagaagactgtctgtgtgggccgacgacctttt
ggtacactaatccgatgtaaacaaccttcaacgttttgcagaacatttgtaatttcatcc
acctctgatcagcaaaaatccttagcttcccataaacaccatcttcaaaaaagacacgct
ccctggacttcaatttgccggtgcttttctgagtggccagatatgtcggaacaacgcttc
cttgtggaatacgccaaacgtggcacggcggggtgcaagaaatgcaaggacaaaatccag
aagggcatcgtgcgcatagggaaaatcgtaccaaaccctttcagtgagtctgctggcgaa
atgaaggagtggtatcacgtgaagtgcatatttgagaagctggagagggcaagagccacg
acgaagaagatcgaggacctgacagagctggagggctgggaggagctgcaggacgaggac
aaagagctcattaataaacacgtttcagaccttatggccaaagtcaacgcaagtcctaaa
aagaaggtccaggccaagttgaacaccactggtcagctcatggcgccccctgctgaccct
tctgtcaatgctccgaggaagttttctggcttcacagctgcgaaggctggcagctccggt
agctcaagcagccccggactgtcggcctccccggcggccaaagccggctccagcagcgtc
ctgtccactcagctctgtgacgcccagcacaaagactgcctcttcagggagtttcgcaaa
ctctgcgcaatggtggctgaaaacaacagctacaacagcaagacacagattatagagaag
ttcctgaagaagggcacaggaggagataaattccacggagatctttacctgacggtgaaa
ctgctgctgccaggcgtggtgaaaagtgtttacaacctgaacgataagcagatagtaaaa
ctcttcagccgcatattcagatccaaccaggaggacatggtgcgagatctggagcagggc
gacgtgtcagaaactgtgaggattttctttgaggagagcaaatcttttcctcctgctgcc
aagagcctcctaacaatccaggaagtagatgcgtccctgatgcgcctcgctcagctcacg
aaggaggacgagcagcagagcgagctggagagcatcgccaaaaagtgcaccagcaacgac
ctgaaatgcattatcaggctaattaagcacgacttgaagatgaacgccggcgccaaacac
gtgttggatgcggtagatccaaacgcgtatgatgccttcaaggcctcccgtaaccttggc
gacgtgatcgagagggttctgaggaaccagcaggacgcctccagcggctctggacccagg
aagctcctgaccgtggaggcgtcgctcatgactcctgtccagccgatgctggccgaggcg
tgtaaatccatcgaatacgccatgaagaaatgtcccaacgggatgtactctgagataaaa
tacgacggcgagcgcgttcaggtccacaagaacggaaacactttcagctacttcagccgc
agcctcaagccagtgctgccccacaaggtggcccacttcaaagagtacatccctcaggct
ttccccggcggccacagcatgattctggacgctgaagtcctgctgattgacacaaagacc
agcaaaccgctgccgtttggcactctgggtgttcacaagaaagctgcctttcaagacgcc
aacgtgtgtctgtttgtgtttgactgcatttacttcaacggtgtgagtttgatggaaagg
ccactctgcgaacgcaggaagtttctggacgacaacatggtggaagtcccaaacaggatc
ctcttctcagagatgaagcatgtcacgagggcaggagacctggcggagatgataactcgc
gtcatcagagaaggactggaaggcctggtgctgaaagacgtaaagggaagctatgagccg
gggaagcgacactggctgaaggtgaagaaggattatttgaacgagggagcgatggccgac
acggcagacctggtggtgctcggtgccttctatggaaaaggatcaaacgggggcatcatg
tctagctttctgatgggctgctacgacccagactcgaagaagtggtgcacggtgaccaag
tgctccggaggctacgatgacgccatgctggcccgactccagaaggagctggatgtgatc
aaaatcagcaaggaaccggggaaaatccccagctggttgaaaattgtcaagaactattat
cctgatttcattatccgtgaccctgagcaagctccggtctgggagatcaccggcgcagag
ttttccaaatcagaaatgcacaccgccgacggcatctccatccgcttcccccgtatgacg
cgaatccgcgacgacaaggactggaagacggccaccaacctgcaccagctcagggagctg
tttcgcatttcgaaggagaactgcgactttaaagtgacggcgggtccttccacgtccgac
gacaaaggctcgtcgggaggagacagcgggggaaactcgccgtcgtcctcatccagcagg
agcgctccggctaaaaagacgagtaacagcactcctaccaaaccaaaggctctaaaatca
aaacctcgcactcccacctctcaggcctccagcgccaagaaggtgaagagcgaggagagc
attcaaagcaacggacaaaacaaaacgtcttcccagctgctgcagccaaggaacgacaag
acgctgctggacatcttcagcggggtcaagctcttcctccccgactccgttcaggacttc
gacaggctgcggcggtactttgtggcgtacgacggagacctggtgccagattacgactcg
gcctcggctacacacacgctgggcgacccgcaggggggcagccggacccagagggtttct
cccagctggatctgggaatgcatccgaaagcggcgagtcgttcctccctgctga
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