Poecilia reticulata (guppy): 103476423
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Entry
103476423 CDS
T05149
Symbol
pnpt1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103476423 (pnpt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103476423 (pnpt1)
03016 Transfer RNA biogenesis [BR:
pret03016
]
103476423 (pnpt1)
Enzymes [BR:
pret01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
103476423 (pnpt1)
Messenger RNA biogenesis [BR:
pret03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
103476423 (pnpt1)
Transfer RNA biogenesis [BR:
pret03016
]
Prokaryotic type
tRNA degradation factors
103476423 (pnpt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
KH_KRR1_2nd
RFamide_26RFa
Motif
Other DBs
NCBI-GeneID:
103476423
NCBI-ProteinID:
XP_008426967
LinkDB
All DBs
Position
LG15:3932107..3941346
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AA seq
810 aa
AA seq
DB search
MSLRSSVHVTDLLSWQLLPVNCNSSWLSSEPSLALWVSVNMRYLVGLGRSFARLHVRSCH
QSIYSRNSNPRRVGVDLGEKKLEISSGSLARFADGSAVVQLGDTSVMVTAVSKTKPSLSQ
FMPLVVDYRQKAAAAGRIPTNYLRRELGTTDNEILTSRLIDRSIRPLFPPGYFYDTQVLC
NLLAVDGVNDPDVLAINAASAALALSDIPWHGPIGAVRVGMVDGELLVNPTRAEMASSSL
NLIVAGAPSSQVVMIEASAENVLQQDFCHAVKVGVKHTQQIILAIQQLVREQKITKRTPV
KMFSVPTEMVDHVRHLFAERIYGVFTDYTHDKISRDEAINKVRLETEENIKEKFPQAEPF
EIIESFNAVSKEVFRNLVLNEYKRCDGRELTALRKISCEIDLFKPLHGSALFQRGQTQVL
SSVTFDSLESSIKTDIITTALSGIKDKNFMLHYEFPPYATNETGKMGGLNRRELGHGALA
EKALRPIIPKDFPFTIRVTAEVLESNGSSSMASACGGSLALMDSGVPISSAVAGVAIGLI
SKANPEKPTEMEDYRLLTDILGIEDYLGDMDFKLAGTNKGITALQADVKIPGLPLKVVME
AIQQATVAKREILGIMNKCIAKPREKRKENGPVVENVQVPVSRRARFVGPGGYNLRRLQA
QTGVTISQMDEETFSVFAPTPGAMNEAQDFIKEICKDDQEQQLEFGAIYTATISEIRDIG
VMVKLYSNMTPVLLHNSQLDHKRIKHPSALGLEVGQELQVKYFGRDPTDGRMRLSRKVLH
SPAATVVKTLSEKQSISMGASSVHRDSSDS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttacgtagttccgtacatgtgactgacttactgtcatggcagctcctacctgta
aactgtaactcctcctggctttcttcagaaccgtctctcgcgctgtgggtttctgtaaat
atgaggtatttagtcggactcggacgctcgttcgcgcgcctccatgtccgttcatgtcac
cagagcatttatagcaggaactccaacccacggagagtgggagtagaccttggagagaag
aaacttgaaatctcttcagggagtttggccagatttgctgatgggtctgctgtagtacag
ctgggagacacctcagtgatggtgaccgccgtcagcaaaaccaaaccgtcgttgtctcag
ttcatgccacttgttgtggactacaggcagaaagcagctgctgcgggtcgaatccccacc
aactatctgaggcgagagctgggcactacagacaatgaaatcctcaccagcagactcatc
gatcgctcgatcaggccacttttccctcctgggtacttttatgacactcaggttctttgt
aacctgcttgcagttgatggtgtcaatgatccagatgttctagcaattaatgcagcttcg
gctgctctggctctgtcggacatcccttggcacggacccataggtgctgtgagagtcggc
atggttgatggagagctgctggtcaaccccaccagggcagagatggcgtccagcagtctg
aaccttattgtggccggagcccccagcagtcaagtggtgatgatcgaggcgtcggccgag
aacgtgctgcagcaggacttctgccacgcagtgaaggtgggagtcaaacacactcagcag
atcatactggccatccagcagctggtgcgggagcagaagatcaccaagcgaacgccggtg
aagatgttctctgttcccacggagatggtggatcacgtgcggcatttatttgctgagagg
atctacggtgtttttacagattatacacatgataagatttcaagagatgaagcaatcaat
aaagttcgactagaaactgaggaaaacataaaagaaaaatttccgcaggctgagccgttt
gaaatcatcgaatcgttcaatgctgtgagcaaagaggtcttccgaaatttagtgcttaat
gaatacaagagatgcgatgggagggaactgacggctttaaggaagatttcctgcgaaatc
gacctcttcaagccgctccatggctccgctctgtttcagagaggacaaactcaggtgctt
tccagtgttacatttgactccctggagtcgagcatcaagacggatattattactacggca
ctgagtggcatcaaagacaaaaacttcatgcttcattatgaattccctccttatgcaacg
aatgagactggaaagatgggaggactcaacaggagagaactcggacacggcgctctcgct
gagaaggctctgaggcccatcattcctaaagatttccctttcaccatcagggtcacagct
gaagtgctggagtcaaacggatcgtcttcgatggcttcggcatgtggaggcagcctggct
ctcatggactcaggtgttcccatctcctctgcggtggcaggtgtcgccattggtctcatc
tccaaggcgaacccggagaaaccaaccgagatggaagactacagattgctgacggatatt
ctgggaatagaggactatctgggagacatggacttcaagctggcaggaacaaacaaaggc
atcactgctttacaggctgatgtgaagattccaggtttacctctaaaggtggttatggag
gcgattcagcaggccacagtggcaaagagggaaatattgggcattatgaacaaatgtata
gcaaaacccagagagaagaggaaggaaaacggacctgttgtcgaaaatgtgcaggtgcct
gtgtctaggagagctcgctttgttggtccgggaggatataacctccgcagacttcaggct
cagacaggtgttacaataagccagatggacgaggagactttttctgtgttcgccccgaca
ccaggagcgatgaacgaagcccaagacttcatcaaagagatctgcaaagacgaccaagaa
cagcagctggagtttggagctatctacactgccacaatctcagaaataagggacatcggt
gttatggtgaaactttattctaacatgactccagtcctgctgcacaattcccagttggac
cacaaacgaattaaacatcccagtgctttggggttagaggtgggacaggagttacaggtg
aagtactttggtcgagatccaacagacggaagaatgaggctgtctcggaaggtgcttcac
tcccctgcagcaaccgttgtcaagacgctgagtgagaagcagagcatctccatgggcgcc
agcagcgtccacagggacagcagcgattcatga
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