Poecilia reticulata (guppy): 103476457
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Entry
103476457 CDS
T05149
Symbol
thumpd2
Name
(RefSeq) THUMP domain-containing protein 2 isoform X1
KO
K28400
U6 snRNA (guanine-N(2))-methyltransferase THUMPD2 [EC:2.1.1.-]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pret03041
]
103476457 (thumpd2)
Spliceosome [BR:
pret03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
103476457 (thumpd2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0020
Methyltransf_31
Methyltransf_25
Methyltransf_11
Ubie_methyltran
MTS
THUMP
N6_Mtase
Methyltransf_12
N6_N4_Mtase
AviRa
Methyltransf_18
TRM5-TYW2_MTfase
PrmA
FtsJ
Methyltransf_24
CMAS
Methyltransf_29
Methyltransf_8
FmrO
DTX3L_a-b
Methyltransf_4
Motif
Other DBs
NCBI-GeneID:
103476457
NCBI-ProteinID:
XP_008427043
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All DBs
Position
LG15:complement(2814524..2828335)
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AA seq
525 aa
AA seq
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MFPNIMPEVRSEDSVVRYYCTAGNGMEPFLVDEVKRKLAAQDVYQIPGKVLFSSSATIHR
VCDLKAAERLFLLLKQDSPVRMSTHSSPAKTASVLQSRLLDDRCQWISAVRTWSRLQGEL
VASRNAVTARTTQRDREKGRGCEKQSDEGEKCLQESRKRRHEFTSEESCEKRWRGREESA
RLSPDLEKADDVSEPEKVCADYSKIELEQSVESCSKNTDDLGKDAPLGSVEDVSFRINCK
CSGKLHRCVSAQEVSRVMGMGLSRLLGWKADLKNPKLEINVYLNDDYCLLGIPLTRLPLA
NRSYLKTPGLRSTVAWAMASLAHIEPGSCVVDPMCGVGTILIEAAKEHKAACFLGVDIDD
GQLQKAAANVVFAELQSRVHLLKASSTALPLPSASVDAVVCDLPFGRKFSTRINMAENLP
VILSEMERVLRVGGTLVVLLSPQLSCLLKKLLSQTNCGPKRNEEAESQTRMISCLASSSQ
QHNLQITSSSSQEASTFSSLRHQATLRVSLGVIDGLIHKYIKTLD
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgaacataatgcctgaagtgagaagtgaagatagcgtggttcgctactactgc
actgctggcaatggcatggagccgtttttagtcgacgaggtgaagagaaagctggctgct
caagacgtttatcaaattcctggaaaagtgctgttcagctcctctgcaacaatccataga
gtctgtgacctaaaagctgcagagagacttttccttctgttgaagcaagactctcctgtg
aggatgtccacacacagcagtccagctaaaaccgcgtctgtactgcagtccagactgttg
gatgacaggtgtcagtggatcagtgctgtaaggacatggagccgcctgcagggggagctg
gtggcaagcagaaacgcagtcacagcaagaactacccagagggacagagagaaggggaga
gggtgtgaaaagcaaagtgatgagggggagaagtgtctccaagagtccaggaaacgcaga
catgagtttacatctgaggagagctgtgagaagagatggagaggtagagaagagagcgca
agactttcaccggacctggaaaaagcggatgatgtcagtgaaccggagaaggtgtgtgct
gattattcaaaaatcgaactggagcaaagcgtggaaagctgcagcaagaacacggatgac
ttgggaaaagacgctcctctgggaagcgtggaggatgtttctttcaggattaactgtaaa
tgcagtggaaagctgcatagatgcgtcagtgcacaggaggttagcagagtgatggggatg
ggtctgagtcgtctgcttggatggaaggctgacctgaagaaccctaagctggagataaac
gtctatctgaatgatgactactgcctgctgggaattccactgaccaggcttcctctggct
aaccggagttaccttaaaaccccggggctgcggtctaccgtagcctgggccatggcttcg
ctggctcacatagagccaggttcttgtgtcgtcgatccaatgtgcggagtgggaaccatc
ttaattgaagctgcaaaggagcacaaggctgcctgtttcttgggtgtggatattgatgat
ggccagctacagaaggcggctgcgaatgtggtatttgcagagcttcaaagcagagtacac
cttttgaaggcgtcgtccacggcgttgcctctgcccagtgccagtgttgacgccgttgtc
tgtgatttgccattcggcaggaagtttagcaccagaataaatatggcagagaaccttccg
gtcatcctcagcgagatggagagagtgctccgtgttggtgggaccctggtggtgctcctg
agtcctcagctgtcttgcctcctgaagaaacttctatcgcaaacaaactgtggtccaaaa
cgcaacgaggaagcagagtcgcaaaccaggatgataagctgcctggcttcatcctcacag
cagcacaatttgcaaatcacatcctcatcctcccaggaagcatcgactttttcatctctg
agacaccaagcaaccctcagagttagcttgggggtgatagatggactcatccataaatat
atcaaaacacttgattag
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