Poecilia reticulata (guppy): 103476778
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Entry
103476778 CDS
T05149
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103476778
Membrane trafficking [BR:
pret04131
]
Protein recycling
Others
Others
103476778
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Big_2
Motif
Other DBs
NCBI-GeneID:
103476778
NCBI-ProteinID:
XP_008427572
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Position
LG15:13356470..13418557
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AA seq
1222 aa
AA seq
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MMETRLGCCFFILFFSEWICLLSLTSILGGTKAEVRCIRQCQQPLVVAVPRERAAPDQAG
SDAAPGEEFVGFVEESFSASGEGKDGAAELVASEESSFKLQPRPGENETSGPQGDGAHQK
LSHPPPSASGPSPNNASEERDNSFNSTGDADAVAWRVRRSAETWSGFRGEGVEDGSVSDQ
EEFELTSSTFALAGDTAHNQAMVHWSGQNSSVILMLTKYYDFNSGRVTESSLWRSTDYGT
TYEKLNEKVGTKSILSYLYVSPNNKRKIMLLTDPEVESSLLISLDEGASYQKHSLGFDIL
SLLFHPEQEDWILAYSHDQKLYVSVEFGKRWQLVHDNVVPNRFYWSRLGLDKDQGMIHLE
ITVSDGRSQYITCKLQNCSDGNKGKPFPGFIIPNSLVVQDEYVFIQVSVSGQAVHYVSYK
RHAFYPMKLPKYTLPKDLQIISTDENQVVAAIQDWHQNESYNLYMSDYRGLFFTLMLEDV
VSTGGPEDNVMIDLYEVAGIKGVFLSNKVVENQVKTYITYNKGRDWHLLQAPTTDLQGNK
VYCEQPYCSLHLHLHVSENPYASGNIVSKDTAPGVIIASGVVGPELSSVNVSIFITSDAG
NTWREVFQEEYSVFFLNQGGSLVAIRHTPLPIRHIWLSFDEGRNWDKYSFTSSPLYVDGV
LGEPGEDILIMTIFGHFSHRSEWQLLKIDFRPIFEKRCTSEDYVTWQLDNEGEVCIMGMK
RIFQKLRANVRCVKARDQYISQMSDSCACTEADFECDYGFERQVDGSCTSAFWFVPSAST
RDCITGDSFFNTTGYRKALSNNCTKGSLLKYSPRQQKCPSQAPRGLQLFTSEGTFVATLG
RNVTFLVFLEEGLSSMTSITVDFGDGTAISYVNISSIDDGVKHIYNKVGIYQVSATASNH
LGFDRVFLYLHVSCHLEQVQLSAPLVVIKDKAVNFTTTLRPSSVGTVTYFWWFDNKTEPV
VTLDGAITFTFSREGSHIVTVQALAGNTVHQDQIRVAVYDYFRSHPLVFSSNLDEMNPGV
SEWREDIGRVVKTCIVQVTGINEDQLLVKLFPGLPTTAEVFLVPERRSRDGGMNEKWAHL
DQLSQVLLSALNQDLIEFTIKPGLQVNVYATRLSPAPLVDGSDSGHSGTAVIMLVSVVLM
GLAIFVIYKFKRKIPGMNTYATEKPDKEQEVIPAVTSIAVPNPEGDELTSLDHVDIQLDS
KSRGYLPSHTDIKLSDEAPRVF
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacgcgtctcggttgctgctttttcatcctttttttctccgagtggatttgt
ctgttgtcgttaacttccatcctgggcggaacaaaggcggaggtaaggtgcattcgccag
tgccagcagccgcttgtcgtggcggtaccccgggaaagagcggccccggaccaggcgggt
tccgacgcagctcccggtgaagaattcgtcggatttgttgaggagtcgttcagcgccagc
ggagaggggaaagacggcgctgcggaattagtcgcgagtgaagaaagttcattcaaacta
cagccgcggccgggggagaatgagacaagtggtccgcagggagacggggcccatcagaaa
ctttcccaccctcctccgagcgcctccggcccctctcctaataacgcgagtgaagagaga
gataacagcttcaactcgaccggggacgcagatgcggtcgcttggagagtgcgaaggagc
gcagagacctggtctggattccggggcgagggtgtggaggatggttcggtttcggaccag
gaggagttcgagctcacaagttcaacgtttgccctcgccggggacacggctcacaaccag
gcgatggtgcactggtccggacaaaacagcagcgtgatactcatgttgacgaaatactac
gacttcaactctggcagagtaacagagagttctttgtggaggtcaaccgattatgggacc
acgtatgaaaaacttaatgagaaagtgggcaccaagagcatactgagctacctgtatgtg
agtccaaacaacaaaaggaagatcatgttactaactgacccagaggtggagagcagcctg
ctcattagccttgacgagggggcgtcctatcagaaacacagcttaggctttgatattctc
agcttgcttttccacccggagcaagaagactggatcctggcttacagccatgaccaaaag
ctctatgtctccgttgagtttgggaagagatggcagcttgtgcacgacaacgtcgttccc
aacagattctactggtctagactgggtttggacaaagaccaggggatgatccacctcgag
atcaccgtctcagatggacggtcgcagtacataacttgcaaacttcagaactgctcagat
ggaaacaagggcaaacctttccccggatttataatcccaaactccctggtggtgcaggat
gaatacgttttcatccaggtgtcagtcagtggccaggctgtccattatgtgtcatataaa
agacatgccttttacccaatgaagcttcccaaatacaccctccctaaggacctgcagata
atcagcacagacgaaaaccaggtggtggcagcgattcaagactggcatcagaatgagtcg
tacaacctctacatgtctgactacagaggactgttcttcactctgatgctggaggatgtt
gttagcaccggtggtccagaggacaatgttatgatagacctctatgaggttgccgggatt
aaaggagtgttcctgtcaaataaagttgttgagaaccaagtgaaaacttatatcacgtac
aacaagggcagagactggcatcttcttcaggctccaacaaccgatctccagggaaacaag
gtctattgtgagcaaccatactgctctttgcatcttcaccttcatgtctcggagaaccct
tacgcctcaggaaacattgtcagcaaagacacggctccaggggttataatagcatcaggt
gtggttggtccagaattaagcagtgtgaatgtcagtatcttcatcacatctgatgctgga
aatacctggagagaggtttttcaggaagagtacagcgtgtttttcctgaatcaaggagga
tctctagtggccatccgacatacacctctgccaattagacacatttggctgagttttgat
gagggcagaaactgggacaaatatagcttcacctcctctccactctatgttgatggggtg
ctgggggagcctggagaggacatcctcataatgacgatatttggtcatttcagccatcga
tctgaatggcaactcctcaagattgacttccggcctatatttgaaaaacgatgcacatct
gaggactacgtgacatggcagctagacaatgagggggaagtgtgcatcatgggaatgaag
agaatcttccaaaaactgagagcaaatgttcgatgtgtcaaggccagagatcagtatatt
tctcagatgtcagactcctgcgcgtgcacagaggcagattttgagtgtgactatgggttt
gagaggcaagtcgatgggagctgcacttcagctttttggttcgttccttcagcatcaact
cgagactgcattacgggggacagcttcttcaacacaacaggatatcgcaaggctttgtcg
aacaactgcaccaagggaagtctgttgaagtacagcccccggcaacaaaagtgtcccagc
caggctcccagaggcctccagctcttcaccagtgagggaacatttgtagcaacgctggga
aggaatgttaccttcttggtctttctggaagagggtctcagctcgatgacaagcataaca
gtggactttggtgatggaactgccatatcttacgttaatatcagctccatcgatgatggg
gtcaagcacatctataataaagttggaatctatcaagtttcagccacagcaagtaaccat
ctcggctttgacagggtcttcctctacctccacgtgtcctgtcacctcgagcaggtgcaa
ctttcagctcctttggtggtcattaaggacaaagcagtaaatttcacaacaacacttcgc
ccaagtagtgtgggaacagtcacatatttctggtggtttgataacaagacagagccagtt
gtgacccttgacggcgcaatcaccttcactttctccagagagggaagtcacattgttact
gttcaggctttggctggtaatactgtccaccaggaccaaatcagagtggcagtttatgat
tatttcaggtcacatcctttggttttttcctctaatctggatgagatgaacccaggggta
tctgagtggagagaagacattggcagagttgtgaagacctgcatagttcaggtcacaggg
attaatgaggaccaactcctggtcaagctgtttccaggtttaccaactacagccgaggtc
ttcctcgtaccggaaaggaggtcaagagacggaggcatgaatgaaaagtgggcacacctg
gatcagctttctcaggttctgctgagtgctctaaaccaggatctcatcgagtttacaatc
aaacccgggctgcaggtgaatgtgtatgccacgcggctgtctccagctcctcttgtggac
ggcagtgacagtgggcacagtggcaccgcagtcatcatgctggtgtcagtggtgctgatg
ggcttggctatctttgtgatatataaatttaaaagaaagatcccaggcatgaacacgtac
gccacagagaaacccgacaaagaacaagaggtcatccctgcggtgacctccatagctgtc
ccaaaccctgagggggatgagctgacctcactggaccatgtggatatacaactggactca
aaaagcagaggctacctgccatctcacacagacatcaagctctctgatgaagcgccccgt
gtgttttaa
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