Poecilia reticulata (guppy): 103476940
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Entry
103476940 CDS
T05149
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pret03009
]
103476940 (rrp12)
Ribosome biogenesis [BR:
pret03009
]
Eukaryotic type
90S particles
Other 90S particles
103476940 (rrp12)
Pre-60S particles
Other pre-60S particles
103476940 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
SEN1_N
ARMC9_ARM
Motif
Other DBs
NCBI-GeneID:
103476940
NCBI-ProteinID:
XP_008427925
LinkDB
All DBs
Position
LG15:17346261..17358858
Genome browser
AA seq
1290 aa
AA seq
DB search
MVKSGKLRSGTGVKLKRWKKGHSSDSNPQTSRFRQAAKSRFFSRPSAKSDLTVDALKLHN
ELQAGPLELNAGARKDTQMEEEPDERLSERTSGTFLSGLSDCSNLTFRKVQRFWESNSAA
HKEICAVLAAVTEVIRSQGGKETETEYFAALMTTLEVVESEESQAAVAYLLNLVMKRVPA
PVLKSKFSDTTKALMDVMSKQVSSDASSALRWILSCLATLLRKQDVSVWSYPSTLQAYHG
LLSFTVHSKPKVRKAAQQGVCSILRGSDFLFTDDAPNHHPAAVTTAKFCIKEVEQAGGSK
EDTTTLQVLCLLKELMGSFPLGSVKSCCETLLRVMTLSHVMVTASAMQAFHRLFTAKPNA
SSLSAELNAQIITALYDYLPSENDLQPLLAWLTVMEKAHVHLASLQSSLSLGHLPRLFSA
AMSCLLSPHTPVVSAATNTLKSLLTECVAPHMEEMGMITATASAGNPSYICKMFRIVEEG
LSYRFHASWPFVLQILGCFYRVAGKQAHPIMTKSLQSLSDLRSIPQFSFSGELDLAVGGA
VESMGPEVVLAAVPLNITGYNDDLEFPRSWLVPVIRDHVKNTRLGFFASYFLPLATTLWQ
RAEELEQQGKKLEAKVYQTLQLQIWTMLPGFCTCPVDLMASFKGVARTLGMAINERPDLR
LTVCQALRTLINKSCSTAEEKAELGRFSKNFLPILFNLYTQQPADGDSGAYRMAVLDTIK
VYLIVTDVQLICTLLQKAFDRLTSTESVEFTRLAVMDLVVAMAPFVDESTMAKTFELIRP
YMEVKEPGMQKKAYRVLEELCGAERDECKSFVLSNLETLKTVLLDTLKNASSPAKRPRLK
CLIHIVKRLNEEHKGFITALLPEVIICTKEVSVGARKNAYSLLVEIGNAFVRFCGNKKDA
MEEYLALVYAGLTGSVTMITCTILALTRLVFEYRDSIDVSTMEQLLQNVCLLLSSRTREV
VKAALGFIKVILFVMDPKALGSHVTLMMEGVGNIKDDVRRHFRTKLKNIFTKFIRKFGFE
LVKSMLPAEHHKVLTNIRKAEARNKRRKQVAEEQDASSESEDETPKRKSQSIEDILAESD
SDLSEDEGTSRNTQKKSGKRKGKAWLKEGEGDDPLNFLDPKVSQRVLATNPQLKKSAKVE
HGFKVTSDGRLIIREDDEDDGKNKGGDEMNDILEEAGVKSKKTQKRKFRDDNLDEDMDVE
PQLKYKAGGSGIHRPLGRSQDVGSDYKSKKGKGDVKKKGKLDPYAYIPLKKDQLNRRKRA
KMHGQFKGMVRGVQKGAQSGKKMQKKKRKA
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaatcagggaaacttcggtcggggaccggggtcaagttgaagcgctggaagaag
ggacacagcagcgactccaacccgcagaccagccgcttccgacaggcggcgaaaagccgc
tttttcagcagacccagcgcgaaaagtgacctgactgttgacgctctcaagcttcacaat
gagctgcaggctgggcccctggagcttaatgcaggggcccgtaaggatactcaaatggaa
gaggagcccgatgagaggctgtcggagagaacgtcgggcaccttcctgagtggcctgtcc
gattgctccaacctcacattcagaaaggtgcagcgcttctgggagtccaactccgctgca
cataaggagatttgtgcagttttagctgctgttactgaagtgatccgaagtcaaggcggg
aaggaaacggagacggagtattttgctgctttgatgacgaccttggaagttgtggaatcg
gaagaatctcaggctgcagtggcttatcttctcaaccttgtcatgaaacgtgttccagct
ccagtgctgaagtccaagttctcggacaccaccaaggctctcatggacgtcatgtctaaa
caggtttcctctgatgcatcttcagctctcagatggatcttgtcctgcttggccactttg
ttgaggaagcaggatgtttctgtctggagctacccatctactctgcaggcttatcatggt
ctgctcagcttcacggtgcacagcaagccaaaggtgcgtaaagcagctcagcaaggcgtt
tgctccattctgcgaggcagcgacttcctctttactgatgacgctccgaaccatcacccc
gctgctgtcactacagccaagttttgcatcaaagaagtagagcaggcaggaggcagcaaa
gaggacaccaccaccctccaggtgctctgcctcctgaaggagctgatgggatcatttcct
ctgggatccgttaagtcctgctgcgaaactctgctgcgcgtcatgactctgagccacgtg
atggtaacagccagcgccatgcaggcgtttcatcggctcttcactgcgaagccgaatgcg
tcgtccctctccgcagaactcaacgcccagatcatcacggctctctatgactaccttccc
agtgagaatgacctgcagcctctgctggcctggcttaccgtcatggagaaagcgcacgtt
cacttggcgagtttgcagagttctctgagtttaggtcacctccctcggctgttctctgcc
gccatgtcctgcctgctgtcgccacacacacctgtggtctctgcagccaccaacacactt
aagagtttgttgacggagtgtgttgctcctcacatggaggaaatggggatgatcaccgcc
accgcctcggcagggaacccctcatatatctgtaaaatgtttcgcattgtggaggaagga
ttatcctatcgctttcatgcctcctggccctttgtgctgcagatccttggttgcttttac
agagttgcaggaaaacaagctcaccccatcatgactaagtccctgcagtccctgtcagac
ctgcgctccatccctcagttctccttcagcggggagttggacctggctgtgggaggcgct
gtggaaagcatggggcctgaagtggtgctggctgctgtgcctctcaacatcaccggctac
aatgatgacttggagttccctcgcagctggttggttccggtcatccgagatcacgtgaaa
aacactcgcctcggtttctttgcttcttattttctccctttggccacaacactctggcaa
agagctgaagagttagagcaacaaggaaagaagctagaagcaaaagtctaccagacatta
cagcttcagatttggaccatgcttcctggcttctgcacgtgcccagtggacctgatggcg
tccttcaagggcgtcgcccggacgctcggcatggccatcaacgaacggccagacctgcgc
ctcaccgtgtgccaagctctgcgtacgctgatcaacaagagctgctccacagcggaagaa
aaggcagaattgggacggttctccaaaaacttcctgcccatccttttcaacctgtacacc
cagcagcctgcagacggggactccggtgcttacaggatggccgtgctcgacaccatcaaa
gtctacttgattgtcactgatgtgcagctgatctgcacattgctgcaaaaagcctttgac
cgactgaccagcacggagagcgttgagttcacacggcttgcagtgatggaccttgtggtt
gccatggctcccttcgttgatgaaagcactatggccaaaacgtttgagctcataagaccg
tatatggaggtcaaagagccgggcatgcagaagaaggcgtaccgcgtgttggaggagttg
tgcggagcagagagagacgagtgtaaatcctttgtcctgtccaacttggaaactctgaaa
actgtcctgctcgacactcttaaaaacgcttcttcacccgcaaagaggccaagactcaag
tgtctgatccatatcgtgaaaaggttgaacgaggagcacaaaggcttcatcactgcgctg
ctgccggaggtgatcatctgcaccaaggaggtttcagttggagctcgtaagaacgcctac
agcctcctggtggaaataggaaacgctttcgttcgcttctgcgggaacaaaaaagatgcg
atggaggagtatttggctctggtgtatgcaggactcaccggatctgtcaccatgatcact
tgcaccattttggcattgactcgtcttgtgtttgagtacagagactcgatagacgtttcc
accatggagcagctgctgcagaacgtctgtctgttgctttcgtctcgaaccagggaggtc
gtcaaagcggctttgggcttcatcaaagtcatcctattcgtcatggaccccaaagctttg
ggctcacatgttaccctcatgatggaaggagttggaaacatcaaggatgacgtcaggagg
catttcagaaccaaactcaagaacatcttcactaaattcatccgaaagtttggctttgag
ctggtgaagagcatgctgcctgcagagcaccacaaggtgctgacaaacatccgcaaggcc
gaggcccgaaacaagaggcggaaacaggtcgcagaggagcaggacgcgtcgtcggagagc
gaagacgagacgcctaaacgaaaaagccaaagcatcgaagacatcctggctgagtccgac
agcgatttgtctgaggatgaaggaacgtctcgcaacacccagaagaaatcaggcaaacgg
aaagggaaagcgtggctgaaggagggagagggagatgatcctttgaacttcttggatcca
aaagtttcacaaagagttctagccacaaatccgcagctgaagaagagcgccaaggtcgaa
cacggcttcaaggtgacctcagacggacggctcatcatcagagaggacgacgaggacgat
gggaaaaacaaaggtggagatgagatgaacgatatcctggaggaagcaggagtgaaatct
aaaaaaacccagaaaagaaagtttcgagatgacaatttagacgaggacatggatgttgaa
cctcaattgaaatataaagccggcggctctggtatccacagacctctgggacgaagccaa
gatgtcggatccgattataaatcaaagaaaggaaaaggagatgtgaagaaaaaaggaaag
ctggatccttacgcttacatccctctgaagaaggaccagctcaatcgcaggaagcgagcc
aaaatgcacggtcagttcaaaggcatggtgagaggtgtccagaagggggcgcagtctgga
aagaaaatgcagaagaaaaaaaggaaagcatga
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