Poecilia reticulata (guppy): 103476955
Help
Entry
103476955 CDS
T05149
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
103476955 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pret03036
]
103476955 (ercc6)
03400 DNA repair and recombination proteins [BR:
pret03400
]
103476955 (ercc6)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
103476955 (ercc6)
DNA repair and recombination proteins [BR:
pret03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
103476955 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
DegQ
Spt5-NGN
Pneumovirus_M2
Motif
Other DBs
NCBI-GeneID:
103476955
NCBI-ProteinID:
XP_008427952
LinkDB
All DBs
Position
LG15:complement(17595725..17612129)
Genome browser
AA seq
1448 aa
AA seq
DB search
MPVEAAEPQASSSFSSPVSAALTPGGLEEDGSARGSALCTFPENGHGSEAAAAYPANTGP
GEGNSAGKRSGTLLQIDRQRIQLASASSGADELQGLGVFVYDQDVLEQGVLQQVDEAIHE
ASQAAAKAEAEKEYQSVLDDVRSVTASLKHINKIIEQLSPYAASSKDISRKIESVKRQKE
NKEKQLKKVRAKQKRLQAILGGEDIQRVEAELLAEDDGEEESGPSTLGSMLMPVQETEWE
ELIRKGHMTPFGTRIPQKEVKKEPRKLMLAENSAFDQYLADQAKLATERKKVPLLKKKKS
SALHVYERTKTGKTVSSSKDKKLKKRMRKLQINALKTHPKARPKTEPKLPKPRRKRHTEG
EQTDSEGSEYLPSDEGLDLDQEEREAMEEGFGDSNEDDEYELKPYKKTTVGTGRKKMKKN
NSEDEYSPESSDDDDDGNNRGRSKKYKDDGDVDYYRQRIRKWKRQRIREREEKRERGEEL
TDDSDAEFDEGFKVPGFLWKKLYKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQVISF
LAGLSYSKLRTRGSNYRYVGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSFTS
NKEKLIPEIAACHGILITSYSAVRNLQDILQRYDWHYVILDEGHKIRNPNAGVTIACKQF
RTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQ
TAFKCACVLRDTINPYLLRRMKDDVKANLSLPDKNEQVLFCRLTEEQRQVYQSFLDSKEV
YQILNGDMQVFSGLIALRKICNHPDLFSGGPRILRGIPEDQLTEEEHFGFWKRSGKLMVV
ESLLRLWFKQGQRVLLFTQSRQMLDILQVFVREKDYSYLKMDGTTAIASRQPLIARYNED
KSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKQQVTIYRLLT
AGTIEEKIYHRQIFKQFLTNRILKDPKQRRFFKSNDIYELFTLADPDGTQGTETSAIFAG
TGSDVKVPKKPDRLKSSPSINGVSHDYRQSPGKQRESGAENRNSLSLGHSSISPSSGNSQ
GKSNTPTDSRSASQNAKDIEMSKTPNMLLVRDGNDSGLVERANKSPTSTSCHQHRDKDRG
KHREKRKHCDSTGTGKHRHKRRKHSRGARFEGHRISHLVKKRTFNKQENEETSTEDQKKS
DDYVLAKLFRKSGIHSVMQHDSIMESSNPDYVLVEAEANRVAKDALKALKISRQQCRLPY
NRPPPPPTKKRFGQKKNSLLVTSSAQPVAISVKCKDAAVVKKSISKKPTAGAHFSGEGAD
DDSNSALLSSASLLAKMKARNHIAMPSSQGAAAAAAEEEEENGPGAPATSSPPAPTTEHD
ELLVDLRNFVAFQASVDGEATTQEVLEYFKPRLTQKQAPVFRELLRSICDFHRTSGQEGI
WRLKENFR
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtagaagctgcagagccccaggcatcttcctccttctccagcccagttagtgct
gctctcactccaggaggtttggaggaggatggatctgcaagaggttctgcactctgtact
ttccctgagaacggtcatggttctgaggcagctgcagcctaccctgccaacactggaccc
ggggaaggtaacagtgctggcaagcggtcagggaccttgctgcagatcgaccgtcagcgc
atccaactggcatctgccagctccggagcagatgagctgcaaggccttggtgtgtttgtg
tatgatcaggatgtcctcgagcaaggtgttctgcagcaagtggatgaggcgatccatgaa
gcgagtcaggctgcggcgaaagctgaggctgagaaggagtaccagtctgtgctagatgac
gtccggtctgttacagcatctttaaaacacatcaacaagattattgagcagctgtctccc
tatgcagcctccagcaaggatatcagcaggaaaattgagtctgtaaaacgacagaaagaa
aataaggagaaacagctgaaaaaagtaagagcgaaacagaagcgacttcaggccatactg
ggaggagaggacattcagagagtggaagctgagctgttggcagaagatgatggagaagaa
gaatctggaccatccacgctgggcagcatgctcatgccggtacaggagaccgaatgggag
gaactcatccggaaaggtcacatgactccttttggcacccgaatcccacagaaggaggta
aaaaaggagcctcggaaactgatgctggctgagaactctgcgtttgaccagtacctggcg
gaccaggccaagttggccacagagcggaagaaggtacctcttcttaagaagaagaaaagt
tctgcactccacgtttatgagaggaccaaaacaggaaaaaccgtttcctcatccaaggac
aaaaaactgaagaagcgcatgcgaaagctgcagataaatgctttgaaaacccatccaaag
gctcgacccaagactgagccaaagcttcctaagcctcggaggaaacggcacacagaggga
gagcagacagacagtgaggggtcagagtacctgcctagtgatgaggggctggacttggac
caggaggagagggaagccatggaggagggctttggggatagcaatgaggatgatgagtat
gaactaaaaccatacaagaagacaactgtggggacaggaaggaagaaaatgaagaaaaac
aacagtgaggatgaatactcccctgagagttcagacgatgacgacgacggcaataaccgg
ggcagatcaaaaaaatataaagacgacggggatgtggactactacaggcagcgaataagg
aaatggaagcgacagcggattcgagaacgagaggagaagcgagaaagaggggaggagctt
acagacgacagtgacgcagagtttgacgaaggcttcaaagttcccggtttcctctggaaa
aagctctacaagtaccagcagaccggtgtgcggtggatgtgggaactccactgtcagcag
gcaggaggcatcctgggagacgagatgggattgggcaaaaccatccaggtcatcagcttt
ctggcaggactaagctacagtaaactgaggactagagggtccaactacagatacgtcggt
ttaggtccaaccgtgatcgtgtgcccggccacagtgatgcaccagtgggtgaaggagttc
cacacctggtggcctcctttcagagtggcggtcctgcacgaaaccggctctttcaccagc
aacaaggaaaagttgattccagagatagcagcgtgtcatggcatcctgatcacatcgtat
tcagctgtgagaaatttgcaagacatcttacagcgctacgactggcactatgttatactg
gatgagggccacaagatcaggaacccaaatgctggtgtcaccatcgcctgcaaacagttt
cgcactcctcacagattcatcctgtccggctcgccgatgcagaacaacttgaaggagctg
tggtctctgtttgacttcgtcttccctggcaaactagggacgcttcctgtcttcatggag
cagttttctgtgccaataaccatgggaggatacagcaacgcgtcacctgtccaggtccag
acggcattcaagtgtgcatgtgtgttgagggacacaataaatccttacctgctcaggaga
atgaaggacgacgtcaaggccaacctctccttgcctgacaaaaacgaacaggtgctgttc
tgcagattaacagaggagcagcggcaggtttatcaaagcttcttagattccaaagaagtc
taccaaatactaaacggtgacatgcaggttttctcgggtttgattgcgctgcgtaagatc
tgcaaccacccggaccttttctccggcgggccccgaatcctgaggggaatcccagaggac
cagctgaccgaggaggaacactttggcttctggaaacgctcgggcaagctgatggtggtt
gagtcgctgctgcgcctctggttcaagcagggccagcgggtcctgctcttcactcagtcc
agacagatgctggacatcttgcaggtgtttgtgagggagaaggactactcgtacctgaaa
atggacggcacgaccgcgattgcttcccgacagccgctcattgctcgctacaacgaggac
aaatccatttttatcttcctgctgaccactaaagttggtggtctgggagtcaatctgact
ggagccaacagagttatcatttatgacccagactggaaccccagcaccgacacacaggct
cgagagcgagcgtggaggataggtcaaaagcagcaggtaacaatctacaggctgctgact
gcagggactattgaagagaaaatctaccacaggcaaatcttcaagcaatttctcaccaat
cgcattctgaaggatcccaaacaaagacggttcttcaagtctaatgacatctacgagctt
tttactttggctgatcccgacggaacgcagggaacagagaccagtgccatattcgcaggc
actggatctgacgtcaaagtacccaagaaacctgacaggttaaagtcctcgccctccatc
aacggtgtcagccatgattatagacagtctccaggaaaacagagagaatctggtgcagag
aacagaaactcgttatcattaggacactccagcatatctccgtccagtggaaactctcag
ggtaaatcaaacacgccaacggacagtcggagcgcaagccaaaatgcaaaagatatagag
atgagcaaaactccaaatatgcttcttgtaagagatggtaacgattcgggtttagttgag
agagcaaacaaaagcccgacctcgaccagctgccaccagcacagagacaaagacagagga
aagcacagggaaaagagaaagcactgcgactccacgggtacgggcaaacacaggcataaa
agacggaagcactcccggggcgctcggttcgaaggtcaccgcatctctcatctggtgaag
aaacgcactttcaataaacaagaaaacgaagagacttcgacagaagaccagaagaaatcc
gacgattacgtcttggccaagctctttaggaaatccggtatccacagcgtgatgcaacat
gacagcatcatggagtcatccaacccggactatgttctagtggaagcagaagccaacagg
gtggctaaagatgcactcaaagcccttaagatttctcggcagcagtgtagacttccttat
aacagacctcctcctccgcctactaagaaacgttttggacaaaagaagaattcgctctta
gtcacgtcgtctgctcagcctgtcgccatttctgttaaatgcaaggacgctgctgttgtg
aagaagtctatctcaaagaagccaactgcaggagctcattttagtggggaaggagcagat
gatgattcaaactcagccctgctgtcatccgcatctctgctggccaagatgaaagctcga
aaccacatcgctatgccttcctcccagggagcagcagcagcagcagcagaggaagaggag
gagaacggccccggagctccagcaacaagctctcctcctgctcccaccactgagcacgac
gagctgctggtggatctgcgcaactttgtggccttccaagcgagtgtggacggcgaggcc
accacgcaggaggtgctggagtatttcaaacccaggctgacccagaaacaggcgcccgtc
ttcagagagctgctcaggagcatctgtgactttcaccggacctccggtcaggagggcatc
tggaggctgaaggagaacttccgctga
DBGET
integrated database retrieval system
