Poecilia reticulata (guppy): 103477150
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Entry
103477150 CDS
T05149
Symbol
herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103477150 (herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103477150 (herc4)
Enzymes [BR:
pret01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
103477150 (herc4)
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
HECT type E3
103477150 (herc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
T7-like_gp12
Motif
Other DBs
NCBI-GeneID:
103477150
NCBI-ProteinID:
XP_008428289
LinkDB
All DBs
Position
LG15:21734329..21745042
Genome browser
AA seq
1047 aa
AA seq
DB search
MLCWGNASYGQLGLGGIDDEIVVEPRRCEFFHGKRVSDVGCGRRHTAFLLDDGTVYTCGC
NDLGQLGHDKSRKKPEQVVALDAQIIMALSCGESHTLALNDKGQVFSWGLGSDGQLGLNN
FEECIRVPRNIKSLSDVQVAQVACGFWHSLALSRGGQIFSWGQNRYGQLGLGLTGQSIST
PQAVQSLQAIPFAQLAAGGAHSFALTLSGAVFGWGRNKFGQLGVNDTNDRCFPTLLKSLR
SQRVIYVSCGEDHTAVLTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNAVTQIS
CGRQHTLAFTPACGKIYSFGLGGNGQLGTRATCNRKSPSPVKGPWATSCPSEENDLEQSC
LVKRIYTGGDQSFAHYCSTIEPQDMDILTVQDPQRRVCTLNEAIIQKWLNNSPGRLPVDV
SNEIDLVFSSACCLNGSFLSTSHPDHFSTSSKYSGVDMNTARLLLHRLIQQDHPKISQQV
AASLEKELIPKLSSSPPDIEALRLYLSLPESPLFSDRSNYITITIPFAKCVVGLKEAPLK
VLGNWWSTFELLFFQRLVDLYKDVIVFLLQMHKMGIPPAEQRIFTCFVDTSLRFLEILHK
VNEKSGSIIQYDKFYIHELDALIDIRNDYVTWIQRQMYPMGRDGVVTLCKYPFVFDAQAK
TALLQTDAVIQMQMAVDQAQLQNFSSMFLPAVESVNPCLILIVRRENIVGDTMEVLRKSK
NVDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMKELLDPKYGMFRYYEESRLIWFSHKTFE
DFDLFNLIGVICGLAIYNFTIVELNFPLALYKKLLKRKPTLEDLKELMPDVGRSLQELLD
YAEDDIEDTFCLNFTITEDNYGATEVLELVPNGENINVNKSNRQEFVDAYVDYVFNKSVA
PLFEGFYSGFHKVCGGRVLDLFQPSELQAMIIGNTNYDWTELEKSTEYKGEYWAEHPTIK
LFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLKLVIQPTGGGEHYLPVAHTCFNLLD
LPKYSSIETLRQKLLHAIDHNQGFNLA
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttgggggaacgcctcctacggacagctcggcctgggcgggatcgacgacgag
atcgtagttgagccgcggaggtgtgagttttttcacgggaagcgagtgagcgacgttggc
tgcggccgcagacacacggccttcctgctggacgatgggaccgtctacacctgcggctgc
aacgacctgggccagctggggcacgacaagtccaggaagaaaccagagcaggtcgtggcc
ttggacgcacagattatcatggcgttgtcctgcggagagtcgcacacgctggccttaaac
gacaaaggccaggttttctcctggggactcggctcagacggacagctgggtctaaataac
tttgaagaatgtattcgagtcccgaggaacatcaagagtttatcagatgtacaggtagcc
caggtggcttgtgggttctggcactccctcgctctctccagaggcggccagatcttctcc
tggggtcagaaccgatacggccagctggggctgggcctgacgggtcagagcatctccacg
cctcaggccgtccagtcgctgcaggccattcccttcgctcagctggcagcaggtggcgct
cacagcttcgccctcactctctctggagccgtgttcggctggggccgcaacaagttcggc
cagctgggggtcaacgacaccaacgatcgctgcttcccaactctcctcaagtccctgaga
tcccagagagtgatctacgtctcctgtggagaggatcacacagccgtgctcacaaaggaa
gggggtgtgtttacgtttggagcaggaggatacggacagctcggccataactccaccaac
catgaaatcaaccccaggaaggtgtttgagctcatgggaaacgcagtcactcagatttca
tgtggaaggcagcacacgctggctttcacgcccgcttgtgggaagatctactcgtttgga
ctgggagggaacggccagctgggcacacgcgccacctgcaacaggaagagcccctccccc
gttaaaggaccctgggccacttcctgtccctcagaggagaacgacttggagcagagctgc
ttggtcaaaaggatttacactggaggagatcagagctttgctcattattgcagcactatt
gaacctcaggacatggacattttgacggtacaagatcctcaaagaagggtttgcaccctg
aatgaggcgatcatacagaaatggctgaacaactcaccaggacgactcccagtcgacgtg
tccaatgagatcgacctggtgttctcctctgcctgctgcctgaatggctcctttctgtcc
accagtcacccggatcacttcagtaccagcagtaaatattctggggtggatatgaacacg
gctcggctgcttctccacaggctgatccagcaggaccacccgaagatttctcagcaggtt
gctgccagtctggagaaggagctgattcccaaactgagcagctctcctccagacatcgag
gccctgaggctctacctgtcgctgcctgaaagccctctgttcagcgaccgcagcaactac
atcaccatcaccatcccctttgccaaatgcgtcgtcggcctgaaggaggcgccgctgaag
gttttagggaactggtggtccacattcgagctgctgttcttccagcggctggtcgatctc
tacaaagacgtcattgtgtttctgctccagatgcacaaaatgggcattcctccggccgag
cagcggatcttcacctgcttcgtggacacttcgctccggttcctggagattctgcacaag
gtgaacgagaaatcaggaagcatcatccagtacgacaagttctacatccacgagctggac
gccctgatcgacatcaggaacgactacgtcacctggattcagaggcagatgtaccccatg
ggccgcgacggtgtggtgactctctgcaagtatcccttcgtcttcgacgctcaggccaag
acggcgctgcttcagacagacgccgtcattcagatgcagatggcggtggatcaggcgcag
ctgcagaacttcagctccatgttcctgcccgctgtggagtcggtcaacccctgcctcatc
ctgatcgttcgcagggagaacatcgtgggcgacaccatggaggtcctcaggaagtccaag
aacgtcgactacaagaagccactgaaggtgatctttgtgggagaagatgcagtggacgct
ggaggagtcaggaaagagttcttcctcctgatcatgaaggagctgctggatcccaaatat
gggatgtttcgctactatgaggaatccagactcatctggttttcacacaagacgttcgag
gactttgacctgtttaacctgatcggggtcatctgtggtctggccatctacaacttcacc
atcgtagagctcaacttccctctggcgctctacaaaaagctcctgaagaggaaaccaaca
ctagaagacctgaaggagctcatgccagacgtgggaaggagcctgcaggaactactggac
tacgctgaagacgatattgaagacactttctgtttgaatttcactatcacagaggataac
tacggagccactgaggtcctggagttggtaccaaacggtgaaaacattaatgtcaataag
tcaaaccggcaggagtttgtggacgcctacgtggattacgtctttaacaagtcagtggct
ccgctgttcgagggattctactcaggtttccacaaagtgtgcggtgggagggttttagat
ctgttccagccgagcgaactgcaagctatgatcattggcaacaccaactatgactggaca
gagctggagaagagcactgagtataaaggagagtactgggccgaacatccgaccataaag
ctcttctgggaggtcttccacgaacttccgctggagaagaagaaacagtttctattgttc
ctcacaggaagcgaccgcatccccatcctgggcatgaaaagcctgaagctggtgatccag
cccaccggcggaggggagcactacctgcctgtagcccacacctgcttcaacctgttggac
cttcccaagtactcgagtatagaaacgctgagacagaagcttttacatgcgatagatcac
aatcaaggcttcaacctggcctga
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