Poecilia reticulata (guppy): 103477296
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Entry
103477296 CDS
T05149
Symbol
fancl
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03460
Fanconi anemia pathway
pret04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103477296 (fancl)
09124 Replication and repair
03460 Fanconi anemia pathway
103477296 (fancl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103477296 (fancl)
03400 DNA repair and recombination proteins [BR:
pret03400
]
103477296 (fancl)
Enzymes [BR:
pret01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103477296 (fancl)
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103477296 (fancl)
DNA repair and recombination proteins [BR:
pret03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
103477296 (fancl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCL_d3
FANCL_d2
FANCL_d1
FANCL_C
zf-RING_2
SLX1_C
Tymo_45kd_70kd
zf-rbx1
DUF2286
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
103477296
NCBI-ProteinID:
XP_008428552
LinkDB
All DBs
Position
LG15:complement(26946298..26968485)
Genome browser
AA seq
410 aa
AA seq
DB search
MESLLIRDNPLLLPLNKKKTVYDGFITVQERDFRIRILLPPDLQLKRARLHCCWQLKHLL
REYEHIVKQRLQQSVDLGGFILELKTVLEVALNRCPEGRSVPPPRYYSQLISEMEIVGWD
KMLSIDMDFQTLKLRAEDSSGRQHTLTVKLKSKHPAEAPDCSADLPVPLTITWTPQSTLE
QLHSQFLLVLESLTDFWDVLDEIDGKTWVLEPEKPSRSDTMRRIAIGNNVSIKVEVDPRH
PQMLPECCLLGADHVVTPLRNKLNANMHMWNPDSSVLNNLRDVLEIEFPSPATHEKSSFN
VECGICYSYRLEDAIPDQVCNDPRCGQPFHQACLYEWLRALPSSRQSFNLVFGECPYCSK
VRGCRQPTQRPGLSAACIFSSYSYGSIHHLALSSQSAFTRSLIARTESEF
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggagagcttattgatacgcgataacccgctgcttttacctctaaacaagaagaaaaca
gtctatgatgggtttataaccgtacaggaaagagacttcagaataagaatactcctccct
ccagatctccaactgaagcgggccaggctgcactgctgttggcagctgaaacacctgttg
cgtgaatatgagcacatagtgaagcagaggctgcagcagtcggtggatcttggcggtttc
attctggagttgaaaaccgtcttggaagtggctctgaatcgatgtcccgagggtcgctcc
gtcccgcctcctcgatattactcccagctcatatctgagatggagattgtcgggtgggat
aagatgctttccatagacatggacttccaaacactgaagctgagggccgaggactcctct
ggaaggcagcacactctcactgttaaactcaagtcaaagcatccagcggaggctcctgac
tgttcagctgacctgccagtccctttgaccatcacctggacaccacagagtactctggag
cagctccacagtcagttcctgctggttctggagtccctgacggacttctgggacgtcctg
gacgagatcgacgggaagacctgggttctagagccggagaagcccagccgttccgacacg
atgaggcggatcgccataggaaacaacgtctccatcaaggtggaggtggatccgcggcac
ccgcagatgctgccagagtgctgcctgctgggagccgatcatgtggtgacgccgctgagg
aataaactgaacgccaacatgcacatgtggaacccggactccagcgtcttgaacaacctc
cgggatgttttggagatcgaattcccgtcaccggccacccacgaaaaatctagtttcaat
gtggagtgcggcatctgttactcctatcggcttgaagacgccatcccagatcaagtgtgt
aatgacccccgctgtggccagccgttccatcaggcctgtctctatgagtggctgcgagcg
ctcccctccagcaggcagagcttcaaccttgtttttggagagtgtccttactgcagtaag
gtacgtggatgcaggcagccgacacaaaggcccggcctcagcgccgcatgcatattcagc
agctactcgtatggatccattcatcatctggccttgtcttctcaaagtgccttcacacgc
agcttaatagctagaactgagtcagagttctag
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integrated database retrieval system
