Poecilia reticulata (guppy): 103477635
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Entry
103477635 CDS
T05149
Symbol
prdm1
Name
(RefSeq) LOW QUALITY PROTEIN: PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pret03000
]
103477635 (prdm1)
Transcription factors [BR:
pret03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
103477635 (prdm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-met
DUF7257
zf-C2HE
B129_C2H2-zf
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
103477635
NCBI-ProteinID:
XP_008429083
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All DBs
Position
LG16:complement(3833157..3847761)
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AA seq
944 aa
AA seq
DB search
MASGESRVRSALWVWLQVSEQERERERGRGLSLRDVDVVRHLISGLQVDHTHTPAQRNLR
ARCGVLALGVGRQKGRTAPVPHKLSILTGRLPERIPVLVPMCGWDQSYTATSHSSAMLTS
EGAHAMEQDGTNHKMASTATSTGSDGAETMTDTDVDMDLEMEEADMTHWAEAEFEEKCTY
IVKDTPWEAGPDADFAMTTTRAEASMPRNLVLKHLAGTKEVVGVCSREYIPKGTRFGPLV
GEIYTADSVPKDANRKYFWRIFVDGEFHHFVDGLDETRSNWMRYVNPAKSATEQNLAACQ
NGMEIYFYTVKPVPAGAELLVWYCHDFARRLRYPPSGELMMQKLKQSLMEVKQQHVDRED
STVEISSMSPVSMTPSPPKREHSVVSILRGTNSTSSSMAPKREPSRPLPTRPRCADSPER
PLYPRALYPLLRPHFPLSEDLLKPSHPGYPLTHSPGKQSSATPSPSARSSPETSPHSSPS
GPALSPASIYPYPGYSPPSAPLPSTFYPPHQYPRYLLPHHYPLPGGGVPTVGGIFPRIYP
VYGSLMPPHLSLLPSDPAARRLVIPEPVHPSSISAHRDYLLPGPRSAFSTATLRDKAGVH
SSYPGHPNPHGPAHAPSSGSPTAATAPPSEQVPTKPTSAHMGNTSERHPDEEAINLTKVK
RGAGSAGYKALPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPFKCQTCSKG
FTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYHCKLCPAKFTQF
VHLKLHKRLHSRERPHKCPHCHRHYIHLVSLRLHLKGYCLAATSGPGSPNVSSQAALEEV
HRANEEIERFDVSEHAERLEQLQGSVEMDAMLEKQVLGMLWRESDLKSPNFHPSYNGTAT
DLLSAGYGAFESPNETSVIKIRRSTPISPVTASITVKQESEDHA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaggtgaaagccgtgtgagaagtgctttgtgggtgtggcttcaagtgagcgag
caagagagagagagggagagagggagagggcttagtctgagagatgttgatgttgtcagg
catttaatatcaggtctccaagtggatcacacacacactcctgcccaaagaaacttgaga
gctcggtgtggagtattagcactcggagtgggaaggcagaagggaagaactgcacctgtc
ccgcataaactctctatcctcacaggcagacttccagagaggatcccagtgctcgtccct
atgtgtggatgggaccaaagttacacggcgacctctcatagctcggccatgttgaccagt
gagggggcgcacgctatggagcaggacggcacaaaccacaagatggcctccacagctacc
agcacgggttcggacggagcagagacgatgaccgacaccgacgtggacatggacctggag
atggaggaggcagacatgacacattgggcagaggccgagtttgaggaaaagtgcacatac
atcgtcaaagacacgccatgggaggcggggccagacgctgacttcgccatgacgacgaca
agagcagaggcgtcgatgcccagaaacctggtcctcaaacacctggcaggcaccaaggag
gtggtcggagtgtgcagccgggagtacatccccaaaggaacccgcttcggtcccctggtg
ggcgagatctacacggccgacagcgtcccgaaagacgcaaaccggaagtacttctggagg
atctttgtggatggtgagtttcaccactttgtggacggtctggatgagacccgctccaac
tggatgcggtacgtcaacccggccaaatcggcgacagagcagaacctggcagcatgccag
aatggcatggaaatttacttctacactgtgaagcccgtcccagccggcgccgagctgctc
gtctggtactgtcatgacttcgcccgccgcctgagatacccgccatcaggggagctgatg
atgcaaaaactcaagcagtcacttatggaggttaagcagcaacatgtggacagagaggac
agcacagttgaaatctccagtatgtctccagtctcaatgactcccagtcctcccaagagg
gagcacagtgtcgtgtccattctccgtggcaccaacagcacctcgtcctccatggccccc
aagagggagcccagccgccctcttcccactcgcccacgttgtgctgatagcccggagcgg
ccactgtacccccgtgctctctacccccttctcagaccacatttccccctctctgaagac
ttgctcaaacccagccaccctggttaccccttaactcattcccctggcaaacagtcgtcg
gccacaccaagcccttctgcaagaagcagcccagaaaccagccctcatagcagcccttct
ggtccagcattatcaccagcttctatttacccttaccctggttactcccctccatctgcc
ccactcccctcaacattctaccctcctcaccagtacccacgttatcttctaccacatcat
tatcctctccctggtggtggtgtcccaactgtaggagggattttccctaggatctatcca
gtgtatggcagcctaatgccccctcatctatccctcctgccttctgaccctgcagcaagg
cgccttgtaatacctgaacctgtgcacccctcctcaatctctgcccacagagactatctc
ctgcccgggccaagaagtgccttctcaactgctactttgagagacaaagcaggagttcac
agctcttatccagggcaccccaacccacacggaccagctcacgctccctccagcggctcc
ccaaccgctgccacagcacctcccagcgagcaggtgccaaccaagcctacctcagcccat
atgggaaacactagtgaacgtcacccagatgaagaggctattaatctgaccaaagtgaag
cgtggtgcagggtcagcaggatacaaggcgttgccttaccctctgaagaagcagaatggc
aaaatcaagtatgagtgcaacgtgtgcagtaagacctttgggcagctgtcaaacctgaag
gttcatcttcgggtgcatagtggagaaaggccattcaaatgtcaaacctgtagcaaaggc
ttcactcaactcgctcatctgcaaaaacactacctggttcacactggggagaaaccacat
gaatgtcaggtttgtcacaagcgcttcagcagcaccagcaacctgaaaactcacctacgc
cttcactcaggggagaagccttatcactgcaagctctgccccgctaagttcacccagttt
gtccacctcaagctgcacaagcgcttacactcccgcgaacgtccacataaatgcccccac
tgccaccgccactacatccacctggttagcctgcggctacacctgaagggctattgcctg
gctgcaacctctggtcctggcagtcctaatgtttcaagtcaagctgccttggaagaggtg
caccgcgccaacgaagagattgagcgcttcgatgtcagtgagcacgctgagcgactggag
cagctgcaggggtcggtggagatggacgccatgttggagaaacaagtgttggggatgctg
tggagggagtctgaccttaagtcccccaacttccaccccagttacaatggcactgccacc
gatcttctgtctgcaggttatggtgcattcgagtccccgaacgagacgtcggttatcaag
atccgccgcagcacccccatctcaccagttactgctagcattaccgtcaagcaggagtca
gaggatcatgcttaa
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