Poecilia reticulata (guppy): 103477651
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Entry
103477651 CDS
T05149
Symbol
sema6c
Name
(RefSeq) semaphorin-6C isoform X1
KO
K06842
semaphorin 6
Organism
pret
Poecilia reticulata (guppy)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Herpes_US9
Motif
Other DBs
NCBI-GeneID:
103477651
NCBI-ProteinID:
XP_008429112
UniProt:
A0A3P9Q5N3
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Position
LG16:4427383..4590746
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AA seq
1086 aa
AA seq
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MRLTSGSPRPILPAFLAFTVAAFLPQLSSGAAPFPQDLEPISVVGRETSYLYPSFQGLMS
DNDTIRLGLDFQRMLRINHMLYIAARDHVFAINLGTSSEQIIPQQKLTWKTKDVAKCTVR
GKNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMSNLEQEGEEVVGQARCPFESR
QSNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIEYG
NYVYFFFSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDS
FFYFDVLQSLTNVLQINHRPAVLGVFTTQANSITGSAVCGFYMDDIEKAFNGKFKEQRNS
ESAWTPVLEEQVPKPRPGSCAGEGSAATYKSSTTFPDETLTFIKSYPLMDESVPSVNDRP
FFTRTTSRFKLTQIAVDTSAGPYKNYTVVFLGSDNGHVLKILASSEGANASFNSQLLEDI
DVYNPNKCNVRGEDRRVLGLELDRDHHALFVAFSSCVIRVPLSRCHDYTNCKKSCLSSRD
PYCIWLKSDSCVTVSPGFKGGFEQDVENGYHQHPDTCHDVLATTRKHNPALDSAFGKTTP
TSASTTHHGAAFPKEAGDSERGTGPDRLPPVGEQGSPDSEPISVEMEGVRRPPELDRTNH
SVHYTLLIACVLVAFVLGAFVSGFLVSCYCNHTSHKSKKLSKDPEAPIPHALSLRSLAKL
NGLLDSQSKEDKLEVSSPKIYNSLFTNGKEHHPARRFGHHGMTMGDLVHPHHHHLHPSSE
LSGLPTPDSTPELPIKSMKAFKNQWEKNQNCNNAKEPKSHNISSRPSSALLPQQVFPYSH
GLSNGHPVVGHLHPEERKIHNVERVLAQPYPSYPQKVMEVTSLDELLKHIHDPNGSKTSQ
LMSPSGLMASGGGGQLVFANRIQPQIPETESAPYYSSSTLPRDSLTRRMDVPPDIPSHHQ
STLERRHSSQRHSLISAATKMPSVGAVGGGGMIPRQHSFSQRSGGPHQPPPLLARMNSTG
SACEIHYPLIPNGYLARQHSYTGEQHDIQHRGAIVRRSTSLKPDVPPKPLFIPATSPVNE
QGKYNY
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgacgtccggatcgcctcgacccatcctgccagcctttctggctttcaccgta
gccgcctttttacctcagctgtcctcgggagctgcaccgtttccacaagacctggaacca
atcagcgtcgtgggcagagaaacctcgtacctctaccccagctttcaggggctcatgtcg
gacaacgacactatccgcctgggcctggacttccagaggatgctgcggatcaaccacatg
ctttacatcgctgctcgggaccatgtttttgcaatcaatcttggcacctcgtctgagcag
ataatcccacagcagaaactgacttggaagacgaaggatgtggcgaagtgcactgtgaga
gggaagaacagcgatgaatgttacaactacatcaaagtgctggtcccacgcaatgacgag
actctgtttgcctgtggcaccaatgccttcaatcccacctgccgtaactataagatgtcg
aacctggagcaggagggcgaggaggtagtgggacaggctcggtgtcccttcgaatcccgc
cagtctaatgtcggccttttcgcaggtggtgacttctactctgcaacaatgactgacttc
ttggcaagcgatgcagtcatttacagaagtctgggagaaagtagtcctgttctgcgtaca
gtcaaatacgactccaagtggctccgagaaccccattttcttcacgccattgagtacggg
aactacgtgtactttttcttcagcgagattgcggtggagtacaccaccctcggcaaggtc
gttttctccagggttgcacgagtgtgtaagaatgacaacgggggttccccgcgggtcctg
gaacgatactggacatctttcctgaaagcccggctgaactgctccgttcctggagattct
ttcttttactttgacgttctgcagtcgctgaccaatgtcctccagataaaccaccggcct
gcggtccttggagtttttaccacacaagcaaacagcatcaccggttcggcagtctgtggt
ttctacatggacgacatagagaaggcctttaatggaaaattcaaggagcagagaaacagt
gagtcagcatggacacctgttctagaagaacaagtcccaaagccgaggccaggcagctgt
gcaggcgaaggctctgcagccacctacaagtcctccaccactttcccagatgagaccctg
accttcatcaagtcctatccgctcatggacgagtctgtcccctcagtcaacgacagaccc
ttcttcactcgcaccaccagcaggtttaagttgacccagatagctgtggacacatcagct
ggaccctataagaactacacggtggtgttcctgggctcagataacggccatgttctgaag
atcctggccagctccgaaggagccaacgcttccttcaactcccagctactggaagacatc
gacgtctacaacccaaacaagtgtaacgtgcgcggggaggacaggagggttctgggtctg
gagctggaccgggatcatcacgctctctttgtggcattctccagctgtgtgatccgagtc
ccgctcagccgctgccatgactacacaaactgcaagaaaagctgtttgtcttcacgggac
ccttactgcatttggctcaagtcagacagctgtgtcacagtctcacctggattcaaaggc
gggtttgaacaggacgtggagaacggctaccatcagcatcctgatacctgtcacgatgtc
ttggcgaccacacgcaagcacaacccagcactagattcagcttttgggaagaccacaccc
acaagcgccagcaccacccatcatggggcggcattcccaaaggaggcaggtgactctgaa
agaggtacaggtcctgatcgccttccccctgtgggggaacaagggtcacctgactcagag
ccaatcagtgtggaaatggagggtgtgagacgacccccagagctggaccgaaccaatcac
agcgtccattacacccttttgatcgcttgtgttttggtggccttcgtccttggagctttt
gtctctgggtttctcgtctcgtgctactgtaaccacacaagtcacaagtccaaaaaatta
tcaaaggatccagaagccccaatcccacatgctctgtctctccggagtctggccaagctc
aatggtctcctggacagccagagtaaagaagacaagttggaggtatcatctccaaagatc
tacaactccttatttaccaatggtaaggagcatcacccagcaaggagatttggtcatcat
ggaatgacaatgggggatctggttcatcctcaccatcatcacctccatccttcctcagag
ctatctggtttacctacaccagactcaaccccagaactccccattaaaagcatgaaagcc
tttaagaaccagtgggagaagaaccagaactgcaacaatgcaaaggaaccaaagtctcat
aacataagctccaggcccagttcagccctgcttccccagcaggttttcccttactcccat
ggcctgtccaacggacatccagtagttggtcacctgcatcctgaggaacgcaaaatccac
aatgttgagcgtgttttagctcagccttaccccagctaccctcagaaggtgatggaggtt
acgtctctggatgagctgctgaaacacattcatgatccaaacggcagcaagacctctcag
ttaatgagcccatcaggcctgatggccagtggaggtggtggacaactcgtctttgccaac
cgaattcagcctcagattcctgagacagaatcggcaccctactacagctcatccaccctt
ccccgggacagtctcacccgccgcatggatgttcctcctgacatcccctcacaccatcag
tccactttggagcggaggcactcctcccagcggcactcgctgatttctgcagctaccaaa
atgcccagtgtaggtgcagtaggcggcggaggaatgattccccgccagcacagcttcagc
caacgaagcggcggacctcaccagccgccaccacttttggcacgaatgaactctacaggg
agcgcttgcgagattcactatcccctcatcccaaatgggtacctcgcacgccagcatagc
tatactggtgaacagcacgatatccagcaccgaggcgcaatcgtccgccggtcaacctct
ctcaaaccggatgtccctccaaaacccctgttcatacctgccacatccccagttaacgaa
cagggcaagtacaactactga
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