Poecilia reticulata (guppy): 103477699
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Entry
103477699 CDS
T05149
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pret01002
]
103477699
Peptidases and inhibitors [BR:
pret01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
103477699
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
Baculo_LEF-11
Motif
Other DBs
NCBI-GeneID:
103477699
NCBI-ProteinID:
XP_008429198
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Position
LG16:5928198..5952580
Genome browser
AA seq
1221 aa
AA seq
DB search
MNKSHSPSLNESLHLLQLLSLKMFLHRSPIRGLGLGLLLLALTQGASGQRRKEAKSSNYK
LQDEGGNGIFVTKSLYPIGSNCSLEVVFILDSSESAKNKLFQQEKIFVLRFSTQLSMLKI
TGVSLKIRMAALQYSSSVSVEHSFVGWKDLDLFHSKINAMNYIGQGTFTSFAITNATQML
LKETQKEAVRIAVLLTDGVDHPRSPDVIVAAEEAKRHSIKIFTVGLSDVSFQRESKEKLQ
AIASSPAERFVHSMEDPKLQEKLLKEMGAIAVENCPPCVCEKGEKGSSGSPGRKGDQGDE
GPSGQKGAKGEPGLNGKPGNDGSKGFPGFKGNKGMKGDCGLPGEKGGTGPEGPPGLPGLK
GEQGEIGPVGDIGPEGPAGPKGDRGHSGEPGPPGDFGIGPPGAKGEKGIQGRTGGVGPAG
KGDPGLPGPQGPAGPQGKPGIQGEGLPGPKGDRGFEGPRGNRGPPGIGFKGDKGNYGLPG
PQGPVGDPGIGLPGEKGVQGPVGLTGPRGAPGIGLMGQKGNQGPPGEPGLPGERGVGAPG
PKGDPGFPGSSGLPGTPGEDGNPGQKGDVGLPGPRGPDGIPGKGVPGGKGDKGDRGSRGQ
PGPSGPMGPPGPKGDPGNVGLPGVTGPPGRGISGPKGDQGPLGPVGPMGEPGVGLPGPKG
DRGPPCPPGPPGAKGEGFFGPPGLPGPPGLPGETGLDGIGLPGPKGDRGFPGPPGPAGPP
GIGLIGPKGSPGPVGPAGLPGLPGDGTQGEKGERGFQGIPGPRGPPGQGLQGDKGDRGQR
GEPGKKGDRGQTGQPGDKGAAGRMGQKGEPGLTETEIIELIKKICNCSKSCNQTALELVF
VIDSSESVGPENFKVIKDLVNGVVDRTTVSWSSTRVGVVLYSNINIVVVDLKQEATADEV
KTAINAMNYVGEGTYTGSAIEKANQVFEAARPGVRKVAVIITDGQTDTRDVVSLESAILK
ANESQIERFVIGIVNESDPNSDDFKRELNFIASDPDQVYMFLIKDFKTLIALEKRLMRCV
FEEGKPDLFDPEKVATFLLPGIPQGTGNNGRAPFRTGGDTRTFPEDFMRVKIVPGYPASQ
LEPESVLPEIPSTDEDRNPSEPERFPFFDRELYRSVEEFLPPFDANKHQQPGANGQAGAS
TRAQTKKESSLAISPPLKPSDTRRSAGCSQYLDPGPCRDYMVKWYYDATSNSCAQFWFGG
CQGNQNRFDTEKKCRETCVKV
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagtcactcaccatcactaaatgagtctctccacctgctgcagctgctcagt
ttgaaaatgttcctgcacagaagtccaatcagaggcctggggcttgggcttctcctgctc
gctctcacgcaaggcgcctcaggccagaggaggaaggaggcaaaaagtagcaactacaaa
ctgcaagacgaaggaggaaatggtatctttgttacgaagtctttgtatcccattggaagt
aactgtagcctggaggtggttttcattctggatagctctgaaagtgcaaaaaataaacta
ttccagcaggagaagatctttgtgttgaggttcagcacgcagctctctatgctcaagata
acaggcgtttcgctgaagatccgaatggctgcactccagtacagcagctctgtgtccgtc
gagcacagttttgttggctggaaagacctggacttgttccacagtaaaataaacgccatg
aactacatcggccaaggaaccttcacctcttttgccataaccaacgccacgcagatgctg
ctaaaggaaacgcagaaggaggctgttaggatcgcggtgctcctgaccgacggagtcgac
catccccgcagccccgacgtgattgtggctgctgaagaggccaagcgccacagcatcaag
atcttcactgttgggttatcagatgtctcctttcagagagagagcaaggaaaaactccag
gccatcgcaagttcccctgcggagcggttcgtccacagcatggaggaccccaaactgcaa
gagaagctgctcaaagagatgggagccatcgcagtagaaaactgcccaccatgtgtgtgt
gaaaaaggagaaaaaggcagttcaggcagtcctggaagaaaaggagaccaaggcgacgaa
gggccatcgggtcaaaaaggagcgaagggtgaacctggattaaatggcaaaccaggaaat
gatggctcaaagggatttccaggttttaagggcaacaaggggatgaaaggagactgtggc
cttccaggagaaaagggtggcactggacctgaaggacctccaggcctaccaggattaaaa
ggagaacagggcgaaataggaccagtgggagacattgggcctgaaggcccagcaggacct
aaaggggacagaggacattctggtgaacctggaccaccaggagacttcgggatcgggcct
ccgggagccaagggtgaaaagggaattcagggaagaaccggtggagtaggaccagctggg
aaaggagatccaggactgcctggcccccaaggaccagctggaccccaaggaaaacctgga
atccaaggagaagggttaccaggaccaaaaggggacagaggatttgaaggtccacgagga
aaccgcgggcctcctggtatcgggttcaaaggtgacaagggtaattatgggcttccagga
ccccaaggtccagttggtgatccaggaattggacttcctggggaaaagggagtccagggt
ccagttggacttacgggacccagaggagctccaggaataggactaatggggcaaaaggga
aatcagggtcccccgggtgagcctggactaccaggagagaggggagtgggagcaccaggt
ccaaagggtgatcctggatttccaggttcatcaggactccctggtacacccggagaggac
gggaatccaggacaaaaaggtgatgttggtttgccaggacccagaggacctgatgggatt
cccgggaaaggagttcctggaggaaagggcgacaaaggagacaggggcagcagaggccag
ccaggtccatccggtccaatgggaccaccgggtccaaagggtgatccaggaaacgtcgga
ctgccaggagtgaccggacctccggggaggggcatttctggtcccaagggagatcaaggt
ccactgggtccggttggaccaatgggagagcctggtgttggtttacctggacccaagggc
gaccgagggccgccttgtcctcctgggcctccaggagcgaaaggtgaaggtttcttcggc
cctcccggacttccaggacctcctggtctgccaggagagactggacttgatggcattggt
ttgcctggacccaagggggacaggggtttccctggaccgcctggtcctgctgggcctcca
ggaattggtctgatcggtcctaagggttcaccaggtccggttggacctgctggccttcca
ggtttaccaggagatggtacacaaggagagaagggggaacgtggatttcaggggattcca
ggacccagaggtcctccaggacaaggtctgcaaggagataagggagacagaggacaaaga
ggtgagcctggaaaaaagggagacagaggacagactggacagccaggcgataaaggagct
gcgggcagaatggggcagaaaggggaacctggactaacagaaactgagattatagaacta
atcaaaaagatttgcaactgtagcaagtcctgcaaccaaacagctctggaactggtcttt
gtaatcgatagctcagagagcgtggggcctgaaaacttcaaagtgatcaaagacttggtg
aacggcgtggtggaccgcaccacagtcagctggagctcaacgcgtgtgggtgttgtcctc
tacagcaacattaacatagtcgtggtcgacctcaagcaggaagccacggcggatgaggtt
aaaaccgcaattaatgccatgaactatgttggagagggaacctacacgggcagcgccatc
gaaaaagccaaccaggtgtttgaggcggcacggccgggtgtgaggaaggtggcggtcatc
atcacagatggacagactgacacgagggacgtggtcagcctggagagcgcgatcctgaaa
gctaatgaaagtcaaattgagaggtttgttatcggcattgtgaatgaaagtgaccccaac
tcagacgacttcaagagggagctcaacttcatcgcctcagatcctgaccaggtttacatg
ttcctgatcaaagacttcaaaacacttatagcacttgagaaaagactcatgcgttgtgtc
tttgaagaaggaaagcctgacctctttgatcccgaaaaggtagccacatttcttcttcct
gggattccacaagggactggtaataatggacgagctccatttaggacaggtggagacact
cgcactttcccagaagacttcatgagggtcaagatagtgccaggttacccagcatcccaa
ttagagccggagtcggtccttcctgagataccaagcacagacgaggacagaaatccttca
gaacctgagaggttccccttctttgacagggagctttaccgatctgtagaagagttcctc
ccaccttttgatgcaaacaaacaccaacagcctggagccaacggacaagccggtgcttca
acgagggctcagaccaagaaagagtcgtctttggcgatttctcctccactaaagccctca
gacacgcggagatcagctggttgcagccagtacctggatccaggcccatgccgggactac
atggtcaagtggtactatgatgccacatcgaactcctgcgcccagttctggtttggcggc
tgtcaaggaaaccaaaaccggtttgacacggagaagaaatgtagagaaacctgtgtaaag
gtctaa
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