Poecilia reticulata (guppy): 103477816
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Entry
103477816 CDS
T05149
Symbol
zc3h12a
Name
(RefSeq) bifunctional endoribonuclease and deubiquitinase ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103477816 (zc3h12a)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
103477816 (zc3h12a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
103477816
NCBI-ProteinID:
XP_008429342
UniProt:
A0A3P9NEJ0
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Position
LG16:complement(8532120..8540483)
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AA seq
623 aa
AA seq
DB search
MDPVLPSDVFDSDLLGTESEELRLKVDFFRKLGYSTAEVKAALRKLGLSTDTNAMLGELV
RNRTTNTSPGVSDSDERSTDLKELLLPPSWDVGTCRIMPQQNSVDSELRPIVIDGSNVAM
SHGNKEVFSCRGIELAVDFFLDRGHNNITVFVPSWRKELPRADAPITDQHILLELEKRKI
VAFTPSRRVGGKRVVCYDDRFIVKLAHDSNGIIVSNDTYRDLQGEKPEWKKCIEERLLMY
SFVNDKFMPPDDPLGRHGPNLDNFLRKKPQPVEQKKLPCPYDKKCTYGMKCKYYHPERAN
HSYLSLADELREKAQISFGKEERKAKSSVNYPQSEPEPSHPRHTHLPWDQQISSVPGHIS
ENKLLIWENFRKSPNQMPSSANGGKCQEDYSASHYMPNRYYPNMSREYFDSGFGSSESYY
SDLPPSLSSTHRLGSQHQSTLPGLQRSPVHMENCNTSHCGKCCSYPHQRHHGNIDCCSQP
IYDTYNPNMFPHGVHQQRSLPAHFHKTATPQLHHNYWSDPFQGAPPARSSCPAPSLPYPS
HCHSSCCSYENHQYQTWGQQKQQPSLPSTPAAFKQNRSEMRKKLHAIFNPNQVDSVMEMF
PHLMDAEVLAAEILNMKAQGMIF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggacccggtacttcccagtgatgtttttgactcagatctgctggggacagaaagtgag
gaactccggcttaaagtggacttcttcagaaaactggggtactccacagcagaggtgaaa
gccgctctgagaaagctgggcctaagcactgacaccaacgcaatgctcggggagcttgtg
aggaacagaaccaccaacacgtcacccggtgtttctgacagcgatgagaggagcacagat
ctgaaagagctgctgctgcctcccagttgggacgttggaacctgcagaatcatgccacaa
caaaacagtgtagactcggagctgagacctattgttattgacggcagcaatgttgctatg
agtcacggcaacaaggaagtgttctcatgcaggggcatagagttggcagtggatttcttc
ctggacagaggtcataataacatcactgtgtttgttccctcttggcgcaaagagttgccc
cgagctgatgcccctataacagatcaacacattctgttggagcttgaaaaacggaaaata
gtggccttcaccccttcccgccgggttggtggcaagcgagtggtttgctatgacgaccgc
ttcattgtcaaacttgcgcatgattcaaatggcataattgtgtccaacgacacctaccgt
gaccttcaaggagaaaaacctgagtggaagaaatgcattgaggagaggctcctcatgtac
tcatttgtgaatgacaagttcatgcctccagatgaccctctaggtcgacatgggcctaac
ctggacaactttctccggaaaaagccccagcctgttgagcagaaaaaactgccctgtcca
tatgataaaaagtgcacttatggcatgaagtgcaagtactaccatcctgagagggcaaac
cactcctacctgtccttggctgatgaactgagagagaaagcacaaatttcttttggaaaa
gaagagagaaaggcaaaatcatcagtcaactatcctcaatctgaacccgagccttctcat
cctcgacacacacatctcccttgggatcagcagatttcctcagttcctggtcacattagt
gaaaataaactacttatctgggaaaacttcagaaaaagccccaaccagatgccgtcttca
gcaaacggaggaaagtgtcaagaagactattccgcatcacactatatgccgaatcgttac
tatcccaatatgtctcgggaatattttgattctggttttggttcgagtgagagctactac
tctgacttgccgccatccctcagcagcacccacagacttggttctcagcatcaaagcacc
ctccctgggctccaacgttccccagttcacatggagaactgtaataccagtcattgtggc
aaatgctgttcctacccgcatcagcggcatcacggcaacatcgactgctgcagtcaaccc
atctatgacacctacaatccaaatatgttcccacacggtgtacatcagcaacggagcctg
cctgcccatttccataaaactgcaaccccccaactccatcataattactggtcagatccc
tttcagggtgcgccgccagccaggtcctcatgccccgccccctccttgccctacccttca
cactgccacagctcctgttgctcctatgagaatcaccagtaccaaacctggggccagcaa
aagcagcaaccgtcgctgccgtcgactcctgctgcattcaagcaaaataggtcagaaatg
cgcaagaaactgcacgccatcttcaacccaaaccaagtggatagtgtcatggagatgttc
ccgcacctgatggatgctgaagttttggctgcagagatactgaacatgaaagctcagggg
atgatattctga
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