Poecilia reticulata (guppy): 103477928
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Entry
103477928 CDS
T05149
Symbol
cnfn
Name
(RefSeq) cornifelin isoform X1
KO
K18808
toll-like receptor 13
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pret04054
]
103477928 (cnfn)
Pattern recognition receptors [BR:
pret04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
103477928 (cnfn)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_1
LRR_9
Motif
Other DBs
NCBI-GeneID:
103477928
NCBI-ProteinID:
XP_017165205
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Position
LG16:complement(13969190..13976756)
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AA seq
971 aa
AA seq
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MVTLTYQLRLLGLILCAVQLISSYSFKSCIADPYYILTSFKCQNRNTTKISDIVKDLPRS
AVNLTVSFNPVQHIPNNSFAHLPNLQYLSLNKNQLSAIDPLAFQTLHQLKHLNLSFNNLS
DLSPLMFEDLHNLTSLLLTNNVLKXLPEDIFSNVANLKTLNLRNNNLTNFSAVVKSVSHL
TNLTFLDLSSNNLTSLSDLNISLPQSLKVLNLCKNNLXTLGCNPXLLRYIQVLDLSFNSK
LXTNALEGVDLRNVKRLQLRSTSVKAVEFLNISNINAGHVVFSGMGLKTDSLLMDLCTML
RRKLSWIKNIDLTHNLIHNTANSTLSVCPKIIGALDLSNNDLKKVHCLDFLGKQXGIKKF
NAEHNHITSLESCTVPHFNNLKELSYRYNRILSVSGYAFHHMPKIEILKLNINNIAFLHR
KALRGLKNLKTLRLDNNLLTDLFNDTFKDNYNLQILNLRNNRISVIFNETFMNLRNLTTL
DLGGNKITQIHPSGLDGLRSLSKFYLDGNNLKQIDPSLYRAFQDTLTVLDLQKNFIRFYK
ESVISPFVKLSKLSDLKLDSQRNYGLVVLPQKFFKGLHSLESLYLTNNKIDFLPPEXFDD
LTSLKFLTLDNCCVGVAQLKPGVFKNLRNLTRLVVENMGIQNFSKDVFGNLTKLRMLQLN
RNVMQSISVDALESLPKLHYLDMRNVPLSCTCKNSLLQNYTVNNPNVQIVYLYEMKCQVD
KKQKFHNFDTKVCYIDQGKYLFFSTAVVIFLFTVSPLLYVKLYWKIKYSYYVFRSWFSNH
WRRLREKEEKCAYDAFISYNFSDEEWVMNQLXPNLEGNGSSFKLCLHHRDFEVGRYIVDN
IVTAVYSSRKTICVVSKNFLQSEWCSLEIQLASYRLFDEHRDVLVLVFLEPISERQLSSY
HRMRKVMLKKTYLQWPGPDCTDPSQAQELFWNQLRRAIRAGNRLETEQNDTDEDFARATN
ETGNYEKLIGR
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggtcactctgacttatcagcttaggctgcttggacttattctgtgtgcagttcaactc
atcagcagctacagctttaaaagctgcattgcagatccgtactatatcctgacaagtttc
aaatgccaaaatcgaaacacgacaaaaatatccgatatagtaaaagatctcccaagatcc
gctgtcaatctcacagtttctttcaaccctgtgcagcacattccyaacaacagctttgct
catttaccaaacttacagtatctcagtttgaataaaaaccagctgagtgctattgatcct
ttggcttttcagacactgcatcaacttaagcatctaaatttgtcctttaacaatttgtca
gacctcagccctttaatgtttgaggacctgcataacctcacctcccttttgctgacaaac
aatgttttaaagrcattgcctgaagacattttctccaatgttgctaatctaaaaacstta
aatttgaggaataacaatcttactaatttttctgcagttgtgaagtctgtatcacatcta
acaaatctaacgttcttagatctttcctccaacaacttgacttcactcagtgatttaaat
atatctctaccacaatccctcaaggttttaaacctatgtaaaaacaatctgcrtactttg
ggatgcaatccaycactcctcagatacatccaggtgcttgatctgtcatttaattcaaag
cttyccacgaacgctttagaaggagtggatttgagaaacgtaaagaggctccagttgcgg
tcaacgagtgtcaargcagtsgagtttttaaacatcagcaacatcaatgcaggtcatgtt
gttttctcagggatgggtctaaagactgacagtctacttatggatttatgcacaatgctg
agaagaaagctgagttggattaaaaatatagatttaacacataatctcattcataataca
gcaaattctaccttgtctgtrtgccctaagatcattggwgctttggatttatccaacaat
gatctgaaaaaagtacactgcttrgactttttaggcaaacaartcggtatcaagaagttt
aatgccgagcacaaccatattacttcactcgaaagctgtacagtgccccattttaacaac
ttaaaagaactgagctaccgttacaatcgcatcctctcagtcagtggatatgctttccat
cacatgccaaagattgagatactaaagctaaacataaataatattgcttttctccatcgc
aaagccctaagagggttaaaaaatcttaagaccctcmgactggacaataacctcctgact
gatttgtttaatgacacatttaaagataattacaacctgcaaatactcaatctgcgcaat
aatcgcatttctgtcatatttaatgagactttcatgaacctaagaaatctaactacattg
gaccttggaggtaataagatcacacaaatacatccttctggtcttgatgggttaagaagt
ctttcaaaattctacctagatggaaacaacctgaaacaaatcgatccatcactctaccgt
gcattccaagacacgcttacagtgctggatttacaaaaaaatttcattcgtttctacaaa
gaaagtgtaatttcaccatttgtaaaactcagcaaactcagtgatctgaaactggacagc
cagagaaattatggccttgttgttttacctcaaaaatttttcaaaggactccattcgcta
gaatctttgtacctcaccaacaacaaaattgattttcttccccctgaarcctttgatgat
ctgacaagcttaaagttcctcacactggataactgttgtgttggagtggcccaattgaaa
ccaggagtcttcaagaatctcagaaatctgaccaggttggttgtagaaaatatgggaatt
cagaacttctccaaggatgtatttgggaatcttacaaagctacgcatgcttcagctaaat
cgtaatgtgatgcagagcatttctgtagatgctcttgagagtttacctaaactccattac
cttgacatgcgtaatgtccctcttagctgtacctgcaaaaacagccttctgcaaaattac
acagtaaataacccaaatgttcagatagtctatctctacgaaatgaaatgtcaagtggat
aaaaaacaaaaatttcacaactttgatacaaaggtttgctatattgatcaaggaaagtat
ctgtttttcagcacagcagttgtgatctttctgtttacagtctctcctttactttatgtc
aaactgtattggaaaatcaagtacagctactatgtgttccgctcctggtttagtaatcac
tggaggagactcagggagaaggaggaaaagtgcgcatatgatgctttcatctcctataat
ttctctgatgaggagtgggtcatgaatcagttgwtgcccaacttggagggaaatggatcg
tcttttaagctctgcctgcatcacagggactttgaggtgggtcgctacattgtggacaac
atcgtcactgcagtgtacagcagcagaaaaaccatttgtgtcgtgagcaaaaacttcctc
cagagtgagtggtgctctctggagatccagctcgcaagttacaggctcttcgatgagcac
cgagacgtccttgtgcttgtgtttctggarccaatttccgagaggcaactgtcatcctac
caccgcatgaggaaagtaatgttgaaaaagacctatcttcagtggcctggccctgactgc
actgatccctcacaggcccaagagctgttctggaatcagctacgyagggcaatcagagca
ggcaacagactggaaaccgaacaaaatgacacagatgaagactttgctcgagccaccaat
gaaacaggaaattatgagaaacttatcggacggtga
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