Poecilia reticulata (guppy): 103477955
Help
Entry
103477955 CDS
T05149
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103477955 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pret01007
]
103477955 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pret03016
]
103477955 (vars2)
Enzymes [BR:
pret01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
103477955 (vars2)
Amino acid related enzymes [BR:
pret01007
]
Aminoacyl-tRNA synthetase
Class I (U)
103477955 (vars2)
Transfer RNA biogenesis [BR:
pret03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103477955 (vars2)
Prokaryotic type
103477955 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
GST_C_2
Arc1p_N_like
GST_C_3
Jag_N
tRNA-synt_1e
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
103477955
NCBI-ProteinID:
XP_008429558
LinkDB
All DBs
Position
LG16:13015538..13033051
Genome browser
AA seq
1274 aa
AA seq
DB search
MATLYVSPHPDDFRSLLALIAAEFCPSSRPRIISEDPPASLNARSRPALALTAAGDADSV
LSGASAVAWYLAFQGKRAGVDSKQQSQVWQWLSFADNELTPVSCAVVFPLMGVMGVDKKL
QQTSRAEFMRVLKVLDQALAPRTYLVGESLTLADMAVATAVLLPFKYALEPSDRKAVTNV
TRWFTTCINQPQFLKVLGEIALCEKVGPVTPTPNAAGKAAYVAVDSNSSAANGPPKTEAQ
LKKEAKKKEKLEKFQQKKEMEAKKKTQPAAEKKAKPEKKELGVITYDIPTNPGEKKDVVS
ALPDSYSPQYVEATWYPWWEKQGFFKPEFGRKSISEQNPRGIFMMCIPPPNVTGSLHLGH
ALTNAIQDCLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLKREKGLSRHDLGRENFIQ
EVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDQKLSYAVQEAFIRMHDEGVIYRSKRL
VNWSCTLNSAISDIEVDKKELSGRTLLPVPGYKEKVEFGVLVSFAYKVDGSDEEVIVATT
RIETMLGDTAVAVHPADPRYQHLKGKFVLHPFCERKMPIVFDDFVDMNFGTGAVKITPAH
DHNDYEVGERHNLAFINILDENGLLINVPPPFLGMKRFEARTAVLQALKDRGQFKEIKDN
PMVVPVCSRSKDIVEPLLKPQWYVSCTEMGKQAADVVREGKLKIIPDHHLKTWFNWMDNI
RDWCISRQLWWGHRIPAYFVTVNDPAVKPGEDMDGHYWVSGRSEEEAKEKAAKRFNVSVD
KISLRQDEDVLDTWFSSGIFPFSIFGWPNESQDLNVFYPGTLLETGHDILFFWVARMVMM
GLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLHAQLTDSNLDP
VEVEKAKQGQKSDYPNGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKLWNA
VKFAMKTLGDNFVPSEKAQLSGEESVADRWILSRLSAAVALCDAGFKAYDFPAITTAVYN
FWLYELCDVYLESVKPVFIKADEDSATQRQAEVCRQTLYTCLDVGLRLLSPLMPFVTEEL
YQRLPRRKPQTDPPSICVTSYPDTTEFCWNSEEVDRDMEFTMTVVKTIRSLRADYNLTKT
RADCYLQCIDAATVSLLQKYSLQIQTLSYSQAVIPLTAEQPVPEGCAVAIASDRCTVNLM
LKGLIDVEKEVTKLMTKKGDLEKQMEKLREKMAKNDYKEKVPAKVQEQDAEKLRQSQTEL
QKVTEAIENFKKMM
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggccaccctctacgtgtcccctcaccccgatgacttcaggagtctgctggctctcatc
gctgctgagttttgtccatcatctcgtcctcggatcatctcggaggatccgccagcttcc
ctgaatgcccgctccagacccgccctggccctgaccgctgccggagacgcggactctgtc
ctgagcggggccagtgcggtggcctggtacttggcttttcaggggaagagggctggggtg
gattcaaagcaacagagccaagtgtggcagtggctcagctttgcagacaacgagctcacc
ccagtttcctgtgccgtggtcttccctctgatgggagtgatgggcgtagataaaaagctg
cagcagacttcgcgggcggagttcatgcgggttctaaaggttctggatcaggccttggca
ccgagaacgtacctggtgggagagagcctcactctggctgacatggctgttgctacagct
gttcttctgccgttcaaatatgcgttggagccttcagacaggaaggcagtgaccaacgtg
accagatggttcacaacctgcatcaaccagcctcagttcctgaaggtgctgggagagatc
gctctttgtgagaaagtgggaccagtaacaccaacacccaacgctgctggaaaagctgct
tatgttgctgtggactccaacagttctgctgctaatggtccaccaaagacggaggcgcag
ctgaaaaaggaagcaaagaagaaagaaaaactggaaaagtttcaacaaaagaaggaaatg
gaggcaaagaaaaagacacaacctgcagcagagaaaaaggcaaaacctgaaaagaaagag
cttggagtgattacctacgacattcctacaaaccccggagagaaaaaagacgtcgtcagt
gcgcttcctgactcgtacagccctcagtacgtggaggctacctggtatccatggtgggag
aagcagggctttttcaaacctgagtttggtaggaagagcatcagtgagcagaaccctcgt
ggcatcttcatgatgtgcattcctcctccaaacgtgaccggatctcttcacctgggtcac
gctctcaccaacgccattcaggattgtttgaccagatggcacaggatgcggggggaaacc
acgctgtggaacccgggctgcgaccacgccggcatcgcaacgcaagtggtggtggagaag
aagctgaagagagagaaaggtctgagccgccacgatctgggcagggagaacttcatccag
gaagtctggaaatggaagaatgagaagggagaccgaatttaccaccagctgaagaagctg
ggctcctctctggactgggacagggcgtgcttcaccatggaccagaagctgtcctacgca
gtgcaggaggccttcatccgcatgcatgacgaaggagtgatttaccggagcaagaggctc
gtcaactggtcctgcacactgaactccgccatctctgacatagaggtggataaaaaggag
ctcagtggcagaactctgctccctgtgcccggctacaaggagaaagtagagttcggggtc
ttggtgtccttcgcttacaaggtggatggatcagatgaggaagtgatcgtggccacgacc
cgtatcgagacgatgttgggagacacggcggtggccgtccacccggctgaccccaggtac
cagcacctgaagggaaaatttgtgctgcatcccttttgcgagcgcaagatgccgatagtc
tttgacgactttgtggacatgaattttggaacgggtgctgtcaaaatcaccccagctcac
gaccataatgactacgaggtcggagagagacacaatctggccttcatcaacatcttggat
gaaaatgggctgctcattaacgtgcctcctcccttcctgggcatgaagcgattcgaggcc
agaacagccgtcctgcaggcgctgaaggacagaggccagtttaaagagatcaaagacaac
cccatggttgtgcccgtctgcagccgttcgaaggacatcgtggagccgctgctgaagcct
cagtggtacgtcagctgcacagaaatgggcaaacaggctgcagacgtcgtgagggaaggg
aagctgaagatcatccctgatcaccacctgaagacgtggttcaactggatggacaacatc
agagactggtgcatctcccggcagctgtggtggggtcaccgtattcctgcctatttcgtc
acagtaaatgatcccgctgtgaagcccggcgaggacatggatggtcattactgggtgagt
ggcagatcagaggaggaggccaaagaaaaagcagcaaaacgcttcaatgtgtctgtggat
aagatttccctccggcaggacgaggatgttctggacacttggttctcgtctggcattttc
cccttctctattttcggatggcctaatgagagccaggacctgaacgtcttctaccccggc
accctgctggagacgggtcatgacatcctgttcttctgggtcgcccgcatggtgatgatg
ggcctgaaactgacgggcaagctgcccttcaaagaggtttatctgcacgccgtggtgcgg
gacgctcacgggaggaagatgagcaaatccctcgggaacgtcatcgacccgctggacgtc
atcaccgggatttccctggagggtcttcacgcccagctgacggacagcaacttggatcct
gtagaggtggagaaggcgaagcaaggccagaagtcagactatccaaacggcatcccagag
tgtgggacggacgctctccggttcgcgttgtgcgcctacaccagccaaggaagggacatc
aacctggatgtcaaccgcatcctggggtaccgtcacttctgcaacaaactgtggaacgct
gtgaagtttgcaatgaaaacacttggagacaactttgttccctcggaaaaagcccagctg
tctggagaggagagcgtggcagacaggtggatcctgtccaggctgagtgcggctgtggct
ctgtgtgacgctggcttcaaggcctacgatttcccagccatcaccaccgccgtctacaac
ttctggctctatgagctctgcgacgtctacttggaaagtgtgaagccagtgttcattaag
gcagacgaagacagcgccacccagaggcaggccgaagtgtgcaggcagaccctttacacc
tgtttggacgtgggtttgcggcttctttcccccttgatgccgttcgtcactgaggaactc
taccagaggttacctcgacggaaacctcagactgacccacccagcatctgcgtcacgtcc
tacccagacaccacagagttttgctggaacagcgaagaggtcgaccgcgacatggagttc
accatgacggtggtcaagacgatccgatccctgagggccgactacaacctgaccaagacc
agagccgactgctacctgcagtgcatagatgctgcaaccgtgtctctgctgcagaaatac
agcctgcagattcagaccttgtcttactctcaggccgtcatccctctgacagccgagcag
ccggtcccagaaggctgcgctgtggctatcgcttctgacagatgtactgtcaacctcatg
ctcaagggtctcattgatgtggagaaggaagtgactaaactgatgacaaagaaaggtgac
ttggagaaacagatggagaaactgagagagaagatggcgaagaatgattacaaggagaag
gtgccggcgaaggtgcaggagcaggatgcggagaagctacgccagagccagaccgagctc
cagaaagtgacagaggccatagaaaatttcaagaaaatgatgtaa
DBGET
integrated database retrieval system
