Poecilia reticulata (guppy): 103478055
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Entry
103478055 CDS
T05149
Symbol
u2af2
Name
(RefSeq) splicing factor U2AF 65 kDa subunit isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103478055 (u2af2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pret03041
]
103478055 (u2af2)
Spliceosome [BR:
pret03041
]
Complex A
U2 snRNP components
U2 related factors
103478055 (u2af2)
Complex B
103478055 (u2af2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Transformer
Motif
Other DBs
NCBI-GeneID:
103478055
NCBI-ProteinID:
XP_008429749
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All DBs
Position
LG16:complement(11653888..11663083)
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AA seq
476 aa
AA seq
DB search
MSDYDEFERQLSENKQAERDKENRHHRRSSSRSRSRERKRRSRDRDRRSRDRRGDSKERR
HRRSSPSSYPQDKAGSRSPHREKKKKVKKYWDVPPPGFEHITPMQYKAMQAAGQIPATAL
LPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQA
PGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN
PSVYVPGTQTINGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSA
TGLSKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGSKNATLTTINQTPVTLQ
VPGLNSSVTQMGGLPTEVLCLMNMVAPEELLDDEEYEEIVEDVREECSKYGQVKSIEIPR
PVDGLEVPGTGKIFVEFTSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactacgacgagtttgagagacagttgtctgaaaacaagcaagcggaaagggac
aaagagaaccgccaccaccgccgctcctcgtcccgcagccgcagcagagagaggaaacgg
aggagcagagacagggacagacgcagcagggaccgccgtggagacagtaaggagcgaaga
cacaggcgcagctcaccatccagctacccccaagacaaagctggaagccgttctccccac
cgtgagaagaagaagaaggtgaagaagtactgggatgttcctccaccgggttttgaacac
atcactcccatgcagtacaaagccatgcaagcggccggacagatcccagccacggccctg
ctgcccaccatgaccccggatggcctggctgttactcccaccccggtgcctgtggtgggc
agtcagatgacccggcaggctcgccgcctctatgtgggcaacatcccatttggcatcaca
gaggaatctatgatggacttttttaacgctcagatgcgtttggggggtctgactcaggcc
cctgggaatcctgtgcttgcagtgcagatcaaccaggataagaactttgccttcctggag
tttcgttctgtggatgaaacaacacaggcgatggcctttgatggcatcatctttcaaggc
cagagcctgaaaatccgccgcccgcacgattaccagcccctgcctggcatgagcgagaac
cccagtgtctatgtgccgggtacacagacaattaatggtgtggtgtccacagtggtgcca
gattcggctcacaagctctttataggtggtttgccaaactacctgaatgatgaccaggtg
aaggaactgctgacatcatttgggccgctgaaggcctttaatctggtgaaagacagcgcc
acaggcctgtctaaaggatacgctttctgtgaatatgttgacgtcaacttgaatgatcag
gctatcgccgggctgaacggcatgcagctgggagacaagaagctcctggtgcagagagcc
agcgtgggctccaagaacgccactctgacaaccataaaccagacgcctgtgacgctgcag
gtcccgggtctgaacagctctgtgactcagatgggcggcctgcccactgaagtgctgtgt
ctgatgaacatggtggccccagaggagctcctggacgacgaagaatatgaggagatcgtg
gaagacgtgagggaggagtgcagcaagtacggccaagtcaagagcatcgagatacctcgc
cctgtggacggcctggaggtgccggggaccggcaagatctttgtggagttcacttcagtt
tttgactcccagaaggccatgcaggggctgacaggaaggaagtttgccaacagggtggtt
gtgacaaaatactgcgatccagatgcttatcaccgccgggacttctggtag
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