Poecilia reticulata (guppy): 103478084
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Entry
103478084 CDS
T05149
Symbol
tmc4
Name
(RefSeq) transmembrane channel-like protein 4
KO
K21988
transmembrane channel-like protein
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pret02000
]
103478084 (tmc4)
03037 Cilium and associated proteins [BR:
pret03037
]
103478084 (tmc4)
Transporters [BR:
pret02000
]
Other transporters
Pores ion channels [TC:
1
]
103478084 (tmc4)
Cilium and associated proteins [BR:
pret03037
]
Other cilia and associated proteins
Stereociliary proteins
103478084 (tmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DWORF
Motif
Other DBs
NCBI-GeneID:
103478084
NCBI-ProteinID:
XP_008429798
LinkDB
All DBs
Position
LG16:complement(11133565..11141267)
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AA seq
702 aa
AA seq
DB search
MTIEQQRQGFAFTGSGHPPDQESLRFRRASSPMSAQIYHEPDRGTSPAQEAEQSGSEPTR
ELRNMAFPMALKKAVRQVQQMQAPAQFSGGSWKQKKTIFVRKFKSNAREFLYFFSLWGKT
LQKIGGNFGGGVQSYFIFLRFLVVLNFVSFLLIAGFVLIPSIVFRSVDIKPEISNANVLS
AQIPADCLKYDPNPQGLVVFYEFFLDLLSGTGFMEYSYMFYGYYNNTVVVTSLVGSDFSY
NLPLAYLLTAVFYFAFCLICIIARMGKAARVAVRTGGSDVRSYSMIVFTGWDYGCLGSKA
TKLKQRNIYYRLQVDLEEERLKKHAASLTLCNKVTLYSLRVLMFFVAIGLIVATFFAIAS
ATTFSQKNSNVQGILGLLYTYLPSIVITTGNFLVPLLCDQIALLEKYPPSATVVVALLRA
VVLRLVSLGILLYTLWNQIECHGSTDMCPCHYNHNNYQCWETSVGQEMYKLMLFDLLVSI
ALLVLVEFPRRMVVDHWSCKLTQWVGRQEFVVPSNVLGLVYGQTVVWTGALFCPLLPLIN
TVKFVILFYCKKITLFNNCRPALRTFRSTTSAFFFLAVLLFGWILALVVMIYSVAEIHPS
FACGPFRSFFRMWNIVPESLSILPKGTRDFLFFIGSQAFSVPLFAASCVFMCYFIALASI
YGKSVAMLRAQLKLAGQDKQFLVKQIEKMKLLSPQDNEGDQD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgagcagcaaagacaaggctttgctttcacaggaagcggtcatcctcctgac
caggagtcgctcaggtttcgccgggcttcttctccaatgtccgctcagatctaccatgaa
cccgacagaggcacaagcccggcgcaggaggcggaacagagcggttctgagccgacccgg
gagctcaggaacatggctttccccatggctctgaaaaaagctgtacggcaggtgcaacaa
atgcaggctcctgctcagttcagcggaggatcgtggaaacaaaaaaagaccatatttgtg
cgtaaattcaaaagtaacgccagagagtttctctacttcttctcactgtggggcaaaacc
ttgcaaaagattggaggaaactttggaggtggagtccaatcgtacttcatcttccttcga
ttcttggtggttctcaattttgtgtccttcctactgattgctgggttcgtcctcatcccc
agcatcgtgttcagatcggtggacatcaaaccagagatcagcaacgctaatgttttgtca
gctcagatccctgcagattgtttgaagtatgacccaaatcctcaaggcctggtggtcttt
tatgagttcttcctcgatttgctctcaggaacaggtttcatggagtattcatacatgttt
tatggatactacaacaacacggttgtagttacttccttggtgggcagcgacttttcctac
aacctacctcttgcctatctgctcactgccgtcttctacttcgctttttgtctcatttgc
atcattgcacgaatgggcaaagcggctcgagttgccgtgagaaccggaggcagcgatgtg
aggagctacagcatgatcgtctttaccggatgggactacggctgcctgggaagcaaagct
accaaactaaaacagaggaatatctactaccggctgcaggtggatctggaggaggagcgc
ctgaagaagcatgcagcttccctcactttgtgcaacaaagttactttatactctctgcgt
gttttgatgttttttgtcgcaatcgggctcatcgtagcgactttctttgccatcgcgagt
gcgactacattcagccagaaaaacagcaatgtgcaagggattctgggattgctttatacg
tatctgccatccatcgtcatcaccacagggaacttcttggtgcctctgctgtgcgaccaa
attgctttgctagaaaaatatcctcccagtgctactgtggtagtggcactattaagggca
gtggtcttgcgtctcgtcagtctgggcatccttctctacaccctctggaatcagatcgag
tgccacggaagtacagacatgtgtccttgtcactacaaccacaacaattaccagtgctgg
gaaacaagtgtgggacaggagatgtacaagctgatgctgtttgacctcctcgttagcatt
gctcttctcgtgctggttgaatttccacgcaggatggtggtggatcactggtcgtgtaag
ttgacccagtgggtgggccggcaggagtttgtggttccctccaacgtcctgggccttgtt
tacggtcagactgtggtgtggaccggagctctcttttgccctctgctgcctctcataaac
acggtcaagtttgttatcctcttctactgcaagaagatcacacttttcaacaactgtcgt
ccagcgctgaggacgttccggtccacaacctctgccttcttcttcctggctgtcctcctg
tttggctggatcctcgccttggttgtcatgatttacagcgtagctgagatccatccgtca
tttgcttgcgggcctttccgttccttctttaggatgtggaatattgttccagagtcctta
tccattcttcccaaaggaacaagagattttctcttcttcatcggctcacaagccttttct
gtacctctgtttgctgcatcatgtgtgttcatgtgctacttcatcgctttagcctctatc
tatggaaaatctgttgcaatgctgagagctcaacttaaattggcagggcaggataagcag
ttcttggtgaagcagattgaaaagatgaagcttctgtcaccacaggacaacgaaggagac
caagactaa
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