Poecilia reticulata (guppy): 103478113
Help
Entry
103478113 CDS
T05149
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X4
KO
K16474
intraflagellar transport protein 88
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pret03037
]
103478113 (ift88)
Cilium and associated proteins [BR:
pret03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
103478113 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_12
TPR_19
TPR_14
TPR_6
TPR_7
TPR_16
TPR_11
ANAPC3
TPR_9
TPR_CcmH_CycH
ARM_TT21_5th
TPR_17
TPR-S
TPR_10
DUF2225
HEAT_Nup120
ARM_TT21_4th
ARM_TT21_N
TPR_15
ARM_TT21_2nd
HAT_PRP39_C
Consortin_N
RPN7
SHPRH_helical-1st
DUF7017
DUF2989
ARM_TT21
NatA_aux_su
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
103478113
NCBI-ProteinID:
XP_008429867
LinkDB
All DBs
Position
LG2:complement(12834333..12856154)
Genome browser
AA seq
876 aa
AA seq
DB search
MENVHLAVEEDDLYLGYNDYNPTFDSEELENDVGFQQAVRTSHGRRPPMTAKFPGTAIGG
RPLVSSFGSRVPMASSMGRPMTGAVQDGSARPMTAVRAAGYSSSLMRGSTFDPLGQSKGP
APPLEAKNEDTAEEKIKILEKKVNDLIEESCMAQSIGALQLALEKAKEAGRKERALIRQR
EASGNTEHINLDLTYSGEVIKQGSNMTTMAESISTQLHSQYEQRKAVLLNLANQYANNEM
YPEALNSYHVIVKNKMFTNAGRLKVNMANIYFKQKNYPKAIKFYRMALDQISNTHKELRI
KIMQNIGVVFVRLGQYSDAITSFEHIMAESPNIKTGFNLILCYYAIGDRERMKKAFQKLI
SVPLGIDDEDKYIPASDDPSSNMVIEAIKNDKLHQMERDLKVLAEKYIMTAAKLIAPAIE
TSFASGFDWCVDMVKCSQYVELANDLEINKAITYLRQKDFNQVEAVETLKTFEKKDSRVK
SAAATNLSFLYFLEKDYDQADRYADLAMNADRYNPAALINKGNTVFVKKDYEKAAEFYKE
ALRNDSSCTEALYNLGLSYKRMNRLEEGLDCFLKLHSILRNSAEVMYQLAHLYEQLGDPQ
QAIEWLMQVIGVTPTDPHVLAKLGKLHDDEGDKSQAFQYYSESFRYFPSNIDVIEWLGAY
YIETQFCEKAIQYFERATLIQPNFVKWQLIVASCYRRSGNYQKALETYKEIHRRFPENVE
CLRFLVRLSTDMGLKEVQEYATKLKKAEKMKEIREQRVKSGRENSARGRREGSTGSAENA
KAEPQPEPKQFSPLLDSDSGRSGRSSSSSKGERLSAKMRSLPGSNEPYEASNPKELDASY
VDPLGPQMDRPKTGAKKPADDDDFADEDLGDDLLPE
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgtccacctagccgtagaggaggatgacctttatttgggttacaacgactat
aaccccacatttgactccgaggaattggagaacgatgtgggcttccagcaggcagttagg
accagtcatggaaggagacctccgatgactgcgaagtttccaggcaccgccatcggaggt
cgacctttagtttcatcttttggttcccgagtccccatggcttcatcaatgggcagaccg
atgactggggctgtccaggatggctctgcccgaccgatgactgctgtcagagctgcaggc
tactcatcctcactgatgcgcggctcaacctttgatcccctgggacagtccaaggggcct
gcgcctccacttgaagcaaagaatgaagacacggcagaagagaagatcaagatactggag
aagaaagtgaatgacctgatagaggagagctgcatggcacagagcataggagccttgcag
ctggctcttgaaaaagccaaagaggcagggaggaaagagcgagcgctgattagacagagg
gaagcgtctggcaacacagagcacatcaacttagacctcacctactctggagaggtaata
aaacagggatcaaatatgactaccatggcagaaagcatttcgactcagctacacagccag
tatgagcagagaaaagctgttttgctcaaccttgccaaccagtatgcgaacaatgaaatg
tacccagaggctctgaacagctaccacgtcatcgtgaaaaacaagatgttcactaacgca
ggtcgcctcaaagtcaacatggccaacatctacttcaaacagaagaactaccctaaagcg
atcaagttctaccgcatggcgctggatcagatctccaacactcacaaggagctgaggatc
aagatcatgcagaatatcggagtggtgtttgtccgcctgggccaatactcggacgccata
acgtccttcgagcacatcatggccgagagtcccaacatcaagaccggcttcaaccttatc
ctgtgctactacgccatcggagacagagagaggatgaagaaggcctttcagaagctcatc
tctgtcccgctgggcatcgatgacgaagacaagtacatcccagccagtgatgaccccagt
tcaaacatggtcattgaggccattaaaaacgacaagcttcaccagatggagagggatctg
aaagtcctggctgagaagtacatcatgactgcagccaaactcattgctccggctattgag
acttcctttgctagtggctttgactggtgtgttgacatggtgaagtgctcgcagtatgtc
gagttggccaatgatctggagatcaacaaagccatcacttacctcaggcagaaggacttc
aatcaggttgaggcggtggaaactctgaaaacattcgagaagaaggacagcagagtgaaa
agcgctgcagccaccaacctttctttcctctatttcctggagaaggactatgatcaggct
gaccgatacgctgacctcgctatgaacgctgatcgctacaatcccgccgcgctcatcaac
aagggcaacacggtgtttgtcaaaaaggactacgaaaaggcagctgagttctacaaagag
gcgctgaggaacgactcctcctgcaccgaggccctctataacctgggtttgtcctataaa
agaatgaacagattggaggagggcctggactgcttcctgaagcttcattcaattctgagg
aacagcgctgaggtgatgtaccagctggctcacctctacgagcagctcggagaccctcag
caggccatcgagtggctgatgcaggtcatcggcgtcactcccacagatccacatgtactg
gccaaactgggtaagctgcacgacgatgagggggacaagtcccaggctttccagtactac
agtgagtctttcaggtactttccctccaacatcgacgtgatcgagtggctcggggcttac
tacatcgagacccagttctgtgagaaggccatccagtactttgaacgagcaacgctcata
cagccaaactttgtgaagtggcagctaatagtggcgagctgttacagaagaagtggaaac
taccagaaagctctggaaacctacaaagagatccatcgaaggtttccagaaaacgtggag
tgcctgcgcttcctggtgaggctgtcgacagacatggggctgaaggaggtccaagaatac
gccaccaagctgaagaaggcggagaagatgaaggagatcagagagcagagggtgaagtcg
ggccgagagaacagcgccagaggtcgcagggagggcagcacagggagtgctgaaaatgcc
aaagcagagcctcaacctgagcctaaacagttcagtcctctgttggactcagacagcggc
cgcagcggccgcagcagcagcagctctaagggggagcgtctgagcgccaagatgaggtca
cttcctggttccaatgagccctacgaagccagcaacccaaaagagctggatgcgtcgtac
gtggacccgctggggcctcagatggacagaccgaagacgggggccaagaagccggcggat
gacgacgactttgcagacgaagatctgggagacgacctgctaccggagtag
DBGET
integrated database retrieval system
