Poecilia reticulata (guppy): 103478141
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Entry
103478141 CDS
T05149
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pret03000
]
103478141
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pret03310
]
103478141
Transcription factors [BR:
pret03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
103478141
Nuclear receptors [BR:
pret03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
103478141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF3135
Motif
Other DBs
NCBI-GeneID:
103478141
NCBI-ProteinID:
XP_008429898
LinkDB
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Position
LG16:14975056..15001924
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AA seq
496 aa
AA seq
DB search
MEYEESDFLPADTPRKKGGAVSKKTHLTQIEVIPCKICGDKSSGVHYGVITCEGCKGFFR
RSQLPTVSYSCSRQSNCQIDRASRNRCQHCRLQKCLAQGMSRDAVKFGRMSKRQRDSLIA
EVERHRQQQQQQQLQDDTQVELSYPPKNRQDHSPQLLQPIATPYSYVGDTYGAEVHPYLV
YSPSDSQGYRGSGVSPTSRFQGRGDSGGHHDIRGFDSRQQHQDLMALHSYNPLDDLYNHY
PHSLRNIDELCASIVRSHRETSQYRLEELQALRWKMFSREEIQAYQSKTVDEMWQHCAVR
LTEAVQYVVEFAKHIPGFRMLSQNDQIALLKTGSMEVVLVRMCRFFNTENNTVFFDGKFA
GTEVFKSLACGDLIAAVFDFAHGMCALKLTEQQLALFSALVLINADRPSLEDRVRVQRVH
RSVEVGLTHILHRDNHDSLLHKLYQRMAVLRSLCSLHMEKLRWFSQRYPLTAHSLFPPLY
KELFASEAELLPGATH
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgaggagtcagactttctacctgcagacacccccaggaaaaaaggaggcgcc
gtgtccaagaagactcatttgacccagattgaagttatcccatgcaagatttgtggcgat
aagtcttctggagtgcattatggagttatcacatgtgaaggctgcaagggcttcttccga
cgcagccagcttcccaccgtgtcctactcctgctccaggcagagtaactgtcagatcgac
cgggccagccggaaccgctgccagcactgccgcttgcagaagtgtttggctcagggcatg
agcagagacgctgtgaagtttggccgcatgtccaaacgtcagagggactctcttattgcc
gaagtggagcgacacagacagcagcagcaacagcagcagcttcaggacgacacgcaggtg
gagctgtcctacccaccaaaaaatcgccaggaccactccccgcagctcctccagcccatc
gccacgccatactcctacgttggcgacacctacggtgcagaggtccacccctatctggtt
tactccccgagcgactcgcaggggtaccggggctccggtgtctcccctacatccagattc
caggggaggggggacagcggtggacaccatgacatcagaggatttgactccagacagcag
catcaggatctcatggctcttcattcctacaatcctctcgatgacctctacaaccactat
ccccactctctgcgaaacatagatgagctgtgtgccagcatcgtgcgttcccacagagaa
accagccagtacagactggaggagctgcaggcactcagatggaaaatgttcagcagagag
gagatccaagcctaccagagcaagacggtggacgagatgtggcagcactgtgccgtccga
ctgactgaagctgttcagtatgtggtggagtttgcaaaacacatcccaggtttccgcatg
ctcagccagaacgaccagatcgcactcctcaaaaccggctccatggaggtggttctggtc
cgaatgtgccgcttcttcaacacagaaaacaacactgttttctttgatggaaaatttgct
gggactgaagtcttcaagtctctggcgtgcggtgatttaatcgcagcggtgttcgacttc
gctcacggcatgtgtgctctgaaactcacagagcagcagctcgccctcttcagtgctctg
gtcctaatcaacgctgaccgtccctctctagaggacagagtgagagtccagcgagtacac
agaagtgtggaggtgggactcactcacatccttcaccgagacaaccacgacagtctgttg
cataagctctaccagaggatggcagtgttgcgttcgctgtgcagcctgcacatggagaag
ctgcgctggttcagccaacgatacccgctcactgctcactccctgttccccccgctctac
aaagagctgttcgcgtccgaggccgagctgctgccgggggccactcactga
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