Poecilia reticulata (guppy): 103478236
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Entry
103478236 CDS
T05149
Symbol
prdm13
Name
(RefSeq) PR domain zinc finger protein 13 isoform X1
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pret03000
]
103478236 (prdm13)
Transcription factors [BR:
pret03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
103478236 (prdm13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_7th_ZNF462
zf-C2H2_15
ADK_lid
zf-BED
Zf-C2H2_ZNF451
Filament_head
Motif
Other DBs
NCBI-GeneID:
103478236
NCBI-ProteinID:
XP_008430118
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All DBs
Position
LG16:complement(27675541..27688448)
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AA seq
712 aa
AA seq
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MYCVCVCIVCVCREGCQGCAPLLEKPESITPPRHFEGGHRPVLIIFFIFFFFLFLLFLPS
LVCARSLAFGSPSVFMVLISPRAMQATRASTTVSVFADCSVPAGLRIGPVPGVFKLGKYL
SDRKDVGPKKKIRLVRGEFVDESGCSVPDWIGFIRAARNSQEQNLEAVSDLPGGQIFYRV
LREIPAGEELSVWYSNLLAQWYDIPTTATPTHDEKGEERYICWYCWRIFKYPNTLKAHVH
FHCALSNGRGFVSGEQARGTESYSRSPKSGDIPNTSGHSNSSDSNRRAVSSSPFPSNKGG
LSKKSSSEEQDRALDMSVASARNQGHLIGLGAASSVLGSMGFHPGVRSAFKPTGVSKVPG
AEASREEAGGKLSGLGFSKLIGNMKPIRNLGEGLNGAGSHPPKCAPAIVDSTSQMVPCGN
PMRGFPLLPHVEETSAFKHVESRIHTGLSPSRYPQIPPGLHFERFSLPHFDGVKTYGGDC
NIPLMPFTVYNGELLYSSPYYPLKFHFSNLLKYPDSVPYFGAPPLSQDLGSITNIDREIA
MHTQQLSEITSDKSRARLDSVPAGSTGSTGSGKPKKGHLCLYCGKLYSRKYGLKIHMRTH
TGYKPLKCKVCFRPFGDPSNLNKHIRLHAEGNTPYRCDFCGKVLVRRRDLERHVKSRHPG
QTLKKLDDKPGGPFDDADHKSDNDSDVDVCFTDDQSDQESSKINDLVLSETI
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtattgtgtgtgtgtatgtattgtgtgtgtgtgcagagaggggtgtcaggggtgtgct
ccattactagaaaagccggagagcataacgccaccgcgtcactttgagggcggacatcgg
cctgtcctcatcatcttcttcatcttcttcttcttccttttcctcctcttcctcccatcc
cttgtatgcgcgcgctctctcgcattcgggtctccatcagtcttcatggttctgatctca
ccccgcgccatgcaagccacccgggcgtccaccaccgtcagtgtgtttgcggactgcagc
gtcccggccgggctccggataggaccggtaccgggcgtcttcaagctggggaagtacctg
tcggaccgcaaggacgtcggaccaaaaaaaaaaatccgtttggtccgcggagagttcgtg
gacgagtcgggctgttctgtgcccgattggatcggattcatccgcgccgccaggaatagc
caggaacaaaacctggaggcagtgtcggacttacctggcggacagattttttaccgagtc
ctgagagaaatcccagcgggagaggagctgagtgtgtggtactccaaccttctcgcccag
tggtacgacatccccaccacggccactcccacgcacgacgaaaaaggtgaggagcgttac
atctgctggtactgctggagaatattcaaataccccaacaccctcaaggcccacgtccac
ttccactgcgctctgagcaacgggcgggggttcgtgagcggcgagcaggccagaggtaca
gagtcgtacagtaggtcgcccaagtccggagacatccccaacacctccggccacagcaac
tcctcggactctaaccggcgggcggtgtcctcctcgcccttccccagcaacaaaggcggg
ctgtcaaagaaaagcagctccgaggagcaggaccgggccctcgacatgagcgtcgcgtca
gccaggaaccagggacacctgataggactgggagccgcgtcttcagtgctgggtagcatg
ggtttccatccgggcgtgcggtccgctttcaagccgacgggcgtctctaaagtcccgggc
gcagaggcgtccagagaggaggccggcggcaagctgagcggcctcggattcagtaaactc
atcgggaacatgaagccaatccgcaacctgggcgagggacttaacggggccgggagccac
ccaccaaagtgcgcgcccgccatcgtggactccacgtctcagatggtaccgtgcgggaat
cccatgcgggggttcccactgctgccgcacgtggaggaaacgtcggctttcaagcacgtc
gagagtcgaatacacaccgggttgtccccctcccggtacccccagatcccccccggtttg
cactttgaaaggttctcacttcctcacttcgacggcgtgaagacgtacggcggagactgt
aacatcccgctgatgcccttcaccgtctacaacggggagctcctgtacagctccccctat
tacccgctcaaattccacttcagcaacctcctcaagtacccggactccgtgccctacttt
ggcgcccccccgctgagccaggacctgggctccatcacgaacattgaccgggagatcgcc
atgcacacgcagcagctgtcggagatcacctcggataagagtcgggctcggctggactcg
gtgcccgccgggagcaccggctccaccggctcgggcaaacccaagaagggccacctgtgt
ctctactgcgggaagctgtactcccggaagtacggcctgaagatccacatgaggactcac
acggggtacaagcctctcaaatgcaaagtgtgcttcaggccctttggagacccgagcaac
ctgaacaagcacatccggctgcacgcggagggcaacacgccctacaggtgcgacttttgc
gggaaggtgctcgtgcggaggcgggacctggagcggcacgtgaagtccaggcaccccgga
cagactttgaagaagctggacgacaaacctggcggcccgttcgacgacgccgaccataag
agcgacaacgacagcgacgtggacgtgtgcttcaccgacgaccagagcgaccaggaatcg
agcaaaatcaatgacttagttttgtcagagacgatttaa
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