Poecilia reticulata (guppy): 103478240
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Entry
103478240 CDS
T05149
Symbol
rnf17
Name
(RefSeq) RING finger protein 17 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pret03036
]
103478240 (rnf17)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Gene silencing
piRNA pathway
103478240 (rnf17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf_RING_Vps8
zf-C3HC4_4
Prion
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
103478240
NCBI-ProteinID:
XP_008430132
LinkDB
All DBs
Position
LG2:complement(13009421..13029668)
Genome browser
AA seq
1582 aa
AA seq
DB search
MMDKGDSPSAAICKLCGNAFKLPEDKTDGNLPRILACGHIFCTNCLVSIECESAIRCPDC
EFWATLPEGGVNSLQEESRIIGLIYTAEMNQIKSLRCNGPKVCQKNRTSPRPTTISNSDV
VKQPADIEKIERTVDESLIQAAENLAQLENIYEALTADLAEQVERERTRLEMEITQASNK
AVHMIQKWKDTQFYQLKKMETHFPSGRAVVSHVQERIKALEIAMQMAREIRRVPFLEQYC
ILDKVLETLQTPVDQKAIDLKCITEGTGMSCVFQSENVSQCLTLSLKMEACGSNVAIKQA
VGNHQSDVSIKSSSRKHVKHRNGFSNLPSSKPDKWESESPGASRSSPQGTHLAPKPAPRI
SSFSDLGSPDVIIEEFFDDNPEPVTPTGPEMANNEWRTQRRRKCHLXDKKCKEVTHWVVV
THVVNPSHFYVRYVAEKKESEVLSRKINELCVGEGCQFTLGDTMERGSMIFVKWKDVVWC
RATVVEVFLKSCVKAVKACPVTQLASLRVFFPDYGFTKSITIQSEEAAAESLLKAVNNHL
RKVAESVNVELNNFAPQAVRCSLKDLVPYNLTEGWSEEAKAEFCCVVGSAAVEMRPLGQD
KDSLLVDLRKAPMEQSTDVPISVREYLVFIEVARFYSPVTLGRKPLMYYPPVYPEASTEL
DAVVSHINSLSDFYIQLVDNMESLLLSAKLQDYYNALKDDELRVYCPVIGQACVARFEDK
LWYRAQVISHPGGRKVEVRYVDFGNKQVLSVSDLRKIKDEFFALPAMAVHCCLADVSPLD
GESWSEACTKRFISLAHQQLVTVKAKGKVPKTEPLPLGVCVGGVNEPKTSIAELLAKENL
VRFKESKQRIKNKKPSRPDSTVWDPPLDLGAAAAKAEASGRVSVEEQNDDPVELQPQLKL
PDERKDLKVMVTHVNSPSSFYVRLTNSDPQLKRICELVKQECALMEPQEVVWKADMYCAA
NINGVWERGRICSDVTSSNTAEVRRCDHGNKVKIHVSNLYPLPSSLIGSLAMECTLNDIR
PTGGRSTWTDTACDLISYYLTGASALMTIKEETDEHPLPVTLSCSNRMGEYISIADFLVD
EGLAFRERKPKVQKPKEIDTQTPATDPESCEKEKSNSPPSVSPFPPTQPASTPPKPFPRS
IITAEKVKTSMYNPPELPCPGHILINVSAIGDDGVIYARTQSAEYQLEQLKEGIQKSIKT
LPRQKPYTWKLVQGCAVIGPDMLWYRGQLLELLGGHVKVQYVDYGLVENIPVVHVYPMLL
CVEVPQLCIPCQLFGINPVGGKWQRDGVALMREVLLNRSVDMQVVALPAEPRGAVAVEIF
LDGMSLSRILCHNEHASMDGALSTKKSLVVTPPASLLDVWDISTESLMGPEEPVLGSFVS
PNLPLEGEHFEVRVTHLWTPNELFLWPLKDTADSEMMDDSLDDLLTRINADITSLPRLTS
FPYGGPCLAEYSDGKYYRARLMKFTSIEPLMILVQHVDFGSDDSLPTSKLRQMPSELLLF
PTRAIKVKVAGFKAPSVERRGDVLPYCPAWSVKAVMEMTDLLHNNITATVVSREPELKVQ
LYNEDRELVHLPLVNSGLAELD
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgatggataaaggagatagtcccagtgctgcaatttgcaaattatgtgggaatgcattt
aaacttccggaggataaaaccgatggtaacctgccccgtatacttgcatgtggccacatc
ttctgcacaaactgcctggtgtccattgagtgtgaaagtgccataagatgtccagattgt
gagttttgggcaacccttccagaagggggggttaacagcctgcaggaagagagcagaatc
attggtctgatttacactgctgagatgaaccagatcaaaagcctccgctgcaatggacca
aaagtgtgccagaagaacagaacatcacctcgtccaacgactatttccaacagtgacgtt
gtgaagcagccagcagacattgagaagattgaaaggacagtagatgagtcattgatccag
gctgcagaaaatcttgcccagttggaaaacatctacgaggccctgacagctgacctggca
gagcaggtggagagagagaggacccgactggagatggagatcacccaggcctcaaataaa
gctgtgcacatgattcagaaatggaaagatacacagttttaccagctaaaaaaaatggag
acgcattttccctccggccgggcagtggtgtcccatgtccaggagaggattaaagctttg
gagatcgccatgcagatggccagagaaatacgccgggtccccttcttggagcagtactgc
atcctggataaggttttagaaaccctgcagacaccggtggatcagaaggccattgatttg
aaatgcatcactgagggaactggaatgagctgtgtttttcagtcagaaaatgtgagccag
tgtttgacgttgtctctgaaaatggaggcctgcggctcaaacgttgcaatcaagcaggca
gtgggaaaccaccaatcagacgtctccatcaaaagctcttcaaggaaacatgtcaagcac
agaaacggcttctccaatctacccagtagcaagccagataaatgggagtcagagagtcca
ggagccagtagatcatcacctcaagggacccatctggccccaaaacctgcccctaggatc
agctcgttctcggaccttggaagcccagatgtgattatcgaggaatttttcgacgacaac
ccagagcccgttactccgactggacctgaaatggccaacaacgagtggagaacccaaagg
agacgaaaatgtcacctacktgacaaaaagtgtaaggaagttactcactgggttgtggtg
acccatgtggtgaatccaagtcacttctacgtccgctatgtggctgagaagaaggaaagt
gaagttctttcaaggaagattaacgaactctgcgttggagaaggttgccagtttacactg
ggagacaccatggagagaggctccatgatctttgtgaagtggaaggacgtggtgtggtgc
cgcgccaccgtggttgaagtctttctgaaaagctgtgttaaggctgtgaaggcctgtcct
gtcacccagctggccagtttgcgggtcttctttccagattatgggttcacaaaaagcatc
accatccaatctgaggaggcggctgccgagtctttactcaaagctgtgaacaaccacctg
aggaaagtggctgaatctgtgaacgtagaactgaataactttgctcctcaggccgtgaga
tgttcactgaaagacctggtcccatataacctgacagagggctggagcgaagaggcaaag
gctgagttctgctgtgtggtcggatctgctgctgtggagatgcgacctttgggtcaggac
aaggactctttgttggtggatctaagaaaagctcccatggagcaatccactgatgttccc
atctctgtcagggagtacctcgttttcatcgaggtggccaggttttactccccagtgact
ctgggcaggaagcctctgatgtactaccctcctgtgtatccggaagccagcacagagctg
gatgctgtggtcagccacatcaacagcctctctgacttctacatccagctggttgacaac
atggagtccctgttgctgtcagccaaactccaggattactacaatgcgctgaaagacgac
gagctccgggtctactgccctgtaataggacaggcttgtgttgcccgttttgaagacaag
ctgtggtaccgagctcaagtcataagccatcctggtggacggaaggtggaggttcgatat
gttgactttggcaataagcaggttttgtcagtcagtgacttgaggaagatcaaagatgag
ttctttgctcttcctgccatggcagttcactgctgcttggcagacgtgtctcctttagac
ggagagagctggagtgaagcctgcaccaaaaggttcatcagccttgctcaccaacagctg
gtcactgtcaaggcaaaaggaaaagtaccaaagactgagcctttgccccttggagtgtgt
gtgggtggagtgaacgagccaaaaaccagcatagctgagctgctggcaaaagaaaatttg
gtccgcttcaaagagagcaagcagagaatcaaaaacaaaaagccgtctcgtcccgattcc
actgtctgggatcctccgctcgatctcggcgcagccgcggcaaaggccgaagcttcgggt
cgcgtctctgttgaggagcaaaacgacgaccctgtggagctgcagccgcagttgaagcta
ccggatgagcgcaaagacctcaaagtcatggtcactcacgtcaactcgccaagcagcttc
tacgtccgactcaccaattctgaccctcagcttaaaaggatatgcgaactggtgaagcag
gagtgtgccctaatggagccgcaggaagttgtgtggaaggcggacatgtactgcgctgcc
aacattaatggagtctgggagagaggacggatctgcagcgacgtcacatcaagcaacact
gcagaagtcagacggtgtgaccatggcaacaaagtgaagatccacgttagtaacctgtac
ccgcttccctcctccttgatcggctccctggcaatggagtgcactctgaatgacatcagg
ccaactggtggccgatcgacctggacagatacagcctgtgacctgatctcctactacctg
acaggagcttcagctctgatgacaatcaaggaggagacagacgagcatccattgcccgtc
acgttgtcctgctccaacagaatgggagagtacatcagcatcgccgacttcctggtcgac
gaaggcctcgccttccgggagagaaagccaaaggtccaaaagcccaaagaaatcgatacc
cagactccagccactgaccccgaaagttgtgaaaaagaaaaaagcaactcccctccatct
gtttctcctttccctcccacccaacctgcttccactcctccaaaacctttccctcgctca
attataacagctgaaaaggtgaagacttcaatgtataaccctccagagctgccgtgtcct
ggtcacatcctcatcaatgtttctgctattggagacgacggtgtcatttatgccagaaca
cagagtgcagagtatcagcttgaacaactgaaggaagggattcagaagagcatcaagacg
ttacccagacagaagccctacacctggaagttggtccagggctgtgccgtcatcggaccc
gacatgttgtggtaccgcggacagctgctggagctgctgggaggtcacgttaaggtacaa
tatgtggactacggtctggttgagaacatcccagtggttcatgtgtatcccatgctactg
tgtgtggaggttcctcagctctgcataccctgccagctctttggcatcaaccctgttggc
gggaaatggcaacgagacggagtcgccttgatgagggaggtgttactgaaccgatccgtc
gacatgcaagttgtggcgctgccggctgagccccggggagccgtcgcagtggagatcttc
ctggatgggatgagtctcagcaggattctgtgtcacaatgaacacgcctccatggacggc
gctctctcaacaaaaaagagtctggtagtgacgcctcctgcctccctgctggatgtctgg
gatatcagcactgagagtctaatgggcccagaggagccagtgttggggtcctttgttagc
ccaaacctgccactagagggagaacactttgaagtcagggtcacgcatttgtggaccccc
aatgagctgttcctgtggcccctgaaggacacggctgattcagagatgatggacgattct
ctggatgaccttttgactagaatcaatgcagacatcacctctctgccacgactgaccagc
tttccatatggtggtccgtgtttggcagagtacagcgatggcaagtactaccgggccagg
ctgatgaagttcaccagcatagagcctctcatgatcttggttcaacacgtagatttcgga
tctgacgactctctgccaaccagcaagctgcgccagatgccatctgagctgctgctgttt
ccgacacgcgcgataaaagtcaaagttgccggcttcaaggctccgagcgtggagcggcgc
ggagacgtcctgccgtactgcccggcgtggagcgtgaaggccgtgatggaaatgaccgat
ctgttgcacaacaacatcacagcaactgttgtttcacgagagccagagctcaaagttcag
ctgtacaacgaggacagagagctggtccatctgcctctggtgaacagcggattggctgag
ctcgactaa
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integrated database retrieval system
