Poecilia reticulata (guppy): 103478280
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Entry
103478280 CDS
T05149
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103478280
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
103478280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
zf-CCCH_2
UBA_N4BP1_C
URO-D
Omega-toxin
Miga
Motif
Other DBs
NCBI-GeneID:
103478280
NCBI-ProteinID:
XP_008430234
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Position
LG2:complement(13225229..13256851)
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AA seq
896 aa
AA seq
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MGLKDHLEDGTGHMLSLGLDLDYLHVDGAEKQTHPNTLKASDVLQVRGGAQSRSGYSIGG
STNSLSTNLSYSSSSSCSNFSEESAISDNEEEQHQVISDSGLDVSHRDQLGLPRSSSLQC
KQVRLDLAPHLSTGDLTRSKALAPADLVSDCRTKVEFALKLGYAEDLVLLVLRKLGPDAL
INDMLGELVKLGTKTEMEQQKGPAVSQSPSSSLSSLASSSSLESCRLPSPSPLLEDKDNF
RPVVLDGSNVAMSHGNKEVFSCQGIQLAVDWFLDRGHRDITVFVPAWRKEQSRPDALITD
QEILRRLEKDKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPE
WKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPIAPEPRKQPCPYGKKCTYG
HKCKFYHPERGSQPQRSVADELRASARISSATSRGLLEHTMKAKSQSSSQPEEMPESDPG
QGSKLPNQSPRSMPSDLTEDRLQSYSKPEGYKGSHVIGGHTSSGLSHSLGHLDRWAQLEE
SSGAYSLGLVETYNRCDSPEGGCRSLVKAYSGLRLVVPQTPESLLAADLKAGSLPSECSS
DGSISSDSFSPDSMSDNSPKCQHHLPHYHHHYSGSYGHVASRVSPGMGQHSPYGYSVTQR
PHASVSEELPCPVSSHSSPRHRKTPSASIVPQHQHLFLGNYPGEQPPRLPQTSAAHPRSQ
NSPFGPNALASWEGDLQDSTMYKGSPLNCRRNYSGSTQHPQHKTHWDSHHEPSTRPCYDL
FSYKSFPPLHGKGWHTPWGQQLPSSTHGLSASSVPPPPQQSLRSIATHRSHLQNERHYSG
HLSSGQYQDLRERVFVNLCAIFPPDLVRKVMAKNPHMTDAQELAASILMEKLQHVS
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatctggaggatggaactggccacatgctcagcctggggctggat
ctggactatctccatgtggatggtgctgagaagcagacgcatccaaacactctgaaggcc
tccgacgtcctgcaggtccgaggcggcgcccaaagcaggagcggctacagtatcggcggg
agcaccaacagtctgagtacaaacctgagttacagcagcagcagcagctgcagcaatttt
tcggaggagagcgccatttctgacaatgaagaagaacagcatcaggtcatctccgattct
ggactcgacgtctcccaccgagatcagctgggcttacctcggagctcctctctgcagtgc
aagcaggtcaggctggacctggcgccacacctgtccacaggagatctaacgcggtcgaaa
gcgctagcgcctgcggaccttgtttcggactgccgcaccaaggtggagttcgctctgaag
ctgggctacgctgaggatctggtgctgctagtcctgaggaaactggggccagacgcactt
attaacgacatgctgggagaactggtcaagctggggaccaagacagagatggagcagcag
aaaggtccagctgtgtcccagtctccttcctcctctttgtcttccttggcctccagctcg
tccctggagtcctgccggctgccgtccccttcgccactgctggaagacaaagacaacttt
cggcccgtcgtcttagacggcagcaacgtagccatgagtcatggaaataaggaagtgttc
tcgtgccaagggatccagctggctgttgattggttcttggatcgaggtcaccgtgacatc
acggtttttgtccctgcatggagaaaggagcagtcacgacctgacgctctcatcaccgat
caagagatcctgaggcgactagagaaagacaagatactggttttcactccatctcggcgt
gttcaggggcgacgtgtggtttgctatgacgacagattcatcgtcaaactggcatacgaa
tccgatggcataatcgtttccaatgacaactacagagacctagccaatgagaagccagag
tggaagaagttcattgatgagcggctgctgatgtactcctttgtcaatgacaaattcatg
cctccagatgatcctcttggacgccatggaccgagcctggaaaacttcctgaggaagaga
cctattgctcctgaacccaggaagcagccctgtccttatgggaagaagtgcacatatggc
cacaagtgtaaattttaccacccagaaagaggcagccagccccagcgctcggtggccgat
gagctccgtgccagcgccagaatatcgtcagcaacttccagaggcctgctggaacatacg
atgaaggcgaagagccaaagcagcagtcaaccagaagagatgccagaatctgacccggga
cagggcagtaaactaccaaaccagagtcctcggagcatgccctctgacctcacggaggac
agactccaaagttattccaaaccagaagggtacaagggaagccacgtcattgggggacat
acttcatcagggttgtcccactcactaggacatctggacaggtgggcgcaactcgaggaa
agcagtggagcctacagtttgggtttagtcgaaacttacaacagatgtgattctccggag
gggggctgcaggtctctggtcaaggcctattcaggtctccgtcttgtggtgccacaaacc
ccagaaagtctcttagccgctgatctgaaagcaggttccctgccatccgaatgcagcagc
gacggcagcattagctcagattccttttcccccgactctatgtcagacaacagccccaag
tgccaacatcaccttcctcactaccatcatcactatagcggctcgtatggtcatgtggca
agccgggtttcccctggaatgggccagcattccccttatggttactctgttactcagaga
cctcacgcgtcggtctctgaggaacttccttgtccagtcagctctcactcatctccacgc
catcgcaagaccccttcagcaagcatcgtaccacagcatcagcatctatttttaggtaac
tatccgggggaacaaccacctcgtctacctcaaacatctgctgctcatcctcgttcccag
aactcgcccttcggtccgaacgcgttggcttcgtgggaaggggacctccaggactccaca
atgtacaaaggatcaccacttaactgtagaagaaactactctgggtcaacccagcaccct
cagcataagacgcactgggattcccaccacgagccgtcgaccaggccctgctatgatctg
ttttcctacaagagcttccccccacttcatggcaagggttggcacaccccttggggccag
cagctcccatcatccacccacggtctgtcagcttctagtgtcccaccgcccccacagcag
tccctcaggtccatcgccactcacaggagccacctgcagaacgagcgtcactactcgggg
catctttcatcgggtcagtaccaggacctaagggagagggttttcgtcaacttatgcgcc
atcttcccaccagatttggtgaggaaggtgatggccaaaaaccctcacatgacggatgct
caagagcttgcagcctcgattttgatggagaaattgcagcatgtttcttaa
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