Poecilia reticulata (guppy): 103478445
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Entry
103478445 CDS
T05149
Name
(RefSeq) pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1
KO
K03145
transcription elongation factor S-II
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pret03021
]
103478445
Transcription machinery [BR:
pret03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
103478445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
103478445
NCBI-ProteinID:
XP_008430532
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All DBs
Position
LG16:complement(20269268..20280454)
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AA seq
741 aa
AA seq
DB search
MTREEDLIRIAKKLDKMVSRNNTEGAIDLLKELKGFNMTLKLLQETRIGMSVNNIRKHCR
DEEVISLAKVLIKDWKRLLDSGNSHSEKVDELKNGLDARKPAAATNSSSSEPQSSHRRLE
AKLKHESDSDKSRNEKHNDNHINKERHADDPGVDGKHLEGQQSEKHLQEIRAEKQTPAAN
PKPGTDNKKERHAPDLQSGKHESDPVKHRSLEDLKKTRDAELIKKEKPSEEPRRYADDGK
EDKSRAESRHEWPVGPPQRGKPTEAHKLIFERRGVLDSSVLYPTRFPSPPRPARPLLPVK
RPSLDSKKDTRKDGKESSSRHPHSQPGSPPPKRPAAEVKKERKVPPDPNAPIAPLPFHLH
PPPPRKEPPDPNAPLPPLPLHLHPPAAPPKRPSVDGGKDRERSGPDVAALTYQSETVKDD
AVQFNTEFPSLKDSDDGKASKKLSDDTKRERKDSSDSKPPSTKKPAIEAKKEKHRKDSSE
LKPSQPAKGHSTDSKSVRRESTDSKRSSSPPAKKISSERRESLGSKPLGQPQRKQSTDSL
ERKGKTEAPRTPTTPTSPLSPSFSSPGGPLSPHLATGDSVRDKCIEMLAAALRTDNDYKD
FGANCDGMAAEIEDHIYQEIRATDMKYKNRVRSRISNLKDPKNPGLRRNVLAGSIELSRI
ASMSAEEMASDELKQLRNVLTQEAIREHQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRS
ADEPMTTFVLCNECGNRWKFC
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgactcgagaggaggacctgatccggatcgccaaaaagctagacaagatggtgtctaga
aataacacggagggtgccatcgacctgctgaaggagttgaaaggcttcaatatgacactg
aagcttctccaggaaacaagaattggcatgtctgtgaacaacatcaggaagcactgcaga
gacgaagaagttatctctttggcaaaagtcctcattaaagactggaagagacttctggac
tctggaaattctcactctgagaaagttgacgaactgaagaatggtttggacgccaggaaa
cctgcagcagctacaaacagctcctcctcagagccacagagcagtcacaggaggctggag
gccaaactgaaacatgaatcagattctgacaaaagcaggaatgaaaaacacaacgacaac
cacataaacaaagagaggcatgcggacgatcccggggtggatggaaaacacctcgaagga
cagcaaagtgagaaacaccttcaagaaatcagagcagagaaacaaacacctgcagcgaat
cccaaaccgggaacggataacaagaaagagaggcacgcaccagacctgcagagtggaaaa
cacgagtcggacccagtcaagcacagatcgctggaggatttgaagaagacgagagacgca
gagctgataaagaaagagaaaccctccgaggagcctaggagatacgcagacgacgggaag
gaggataaaagcagagcggaaagcagacacgagtggcctgtcggcccacctcagagaggg
aagcccactgaagctcacaagctaatctttgaaaggagaggagtgctggacagcagcgta
ctgtaccccacccgcttcccctccccccctcgacccgctcggcctcttctgcccgtcaaa
cgtccgtctctggactcgaaaaaagacaccaggaaggacggtaaagagtcttcctctcga
caccctcactctcaaccgggctctccgccaccaaaacgacccgcggcggaagtcaagaaa
gagaggaaggttccaccggacccaaatgctccgatagctcctcttcccttccacctccat
cctcctccgccgagaaaagagcctcctgatcccaacgcgccccttcctcctctcccgctc
cacctccatccccccgctgctcctccgaagcgcccctctgtggacgggggcaaggacaga
gagaggtctgggccagatgttgctgccttgacgtaccagagtgaaacagtcaaggacgac
gcagtacaattcaacacagagtttccctctttgaaagattcagatgatggcaaagcatct
aagaaactgtcagatgacaccaagagagaaaggaaagattcttctgactctaaaccaccc
tctaccaaaaagcccgccatcgaggccaaaaaagaaaagcacaggaaggattccagtgaa
ctgaagccaagccaacctgcaaaaggccattccactgactccaaatccgtcagacgcgag
tccaccgactcaaagagaagcagctcacctccagcaaagaagatatcaagtgaaaggaga
gagtctttaggctcgaagcctcttggacaaccacagaggaaacagtctactgacagcctg
gaaaggaagggtaaaaccgaagcgcccagaactcccaccaccccgaccagtccgctgtca
cccagcttcagctctccggggggtcctctgtcccctcacctggctactggagactccgtt
agagacaagtgcattgagatgctggcagctgccctgcggacagacaatgactacaaagat
tttggagcaaactgcgacggcatggcagcagagattgaggatcatatctaccaggagatc
agggccacagacatgaagtacaagaaccgagtccggagccgcatcagcaacctgaaggac
cccaagaacccgggacttcgcagaaacgtcctggccggcagcattgagttgagccgcatc
gccagcatgtctgctgaggaaatggccagtgatgagctgaagcagctgaggaacgtccta
acccaggaggccatcagggagcaccagatggccaaaaccggtgggaccaccacagacctg
ctgcaatgcggcaaatgcaagaagaagaactgcacctacaaccaggtgcagacccgcagc
gctgatgagccgatgaccacatttgtcctctgcaatgagtgtggcaaccgctggaagttc
tgctga
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