Poecilia reticulata (guppy): 103478595
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Entry
103478595 CDS
T05149
Symbol
nhlrc1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103478595 (nhlrc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pret04121
]
103478595 (nhlrc1)
Enzymes [BR:
pret01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103478595 (nhlrc1)
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103478595 (nhlrc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_2
DUF5711
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
103478595
NCBI-ProteinID:
XP_008430759
UniProt:
A0A3P9QAX8
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All DBs
Position
LG16:17591471..17593516
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AA seq
399 aa
AA seq
DB search
MDQSPDLPHRCCPSPEATLREIQLNLLECKVCFETFNSQQRERRPQNLSCGHVLCLECIT
ALSHPLLRKLECPFCRQLCSVDSTSHCQVLSDLQELLLSQIPSSSAPPHRARGGFVSETA
LHLLAAFGGWGTLINPTGIAVLGSAGGVVVVHDGEKRVVVFNQHGRKLHSFGEKGTGNGD
ICYPVDVAVSPTGYIVVTDAGDKSVKVFTSRGVHVVTVKDCFQLPWGVDTDCSGHILVSD
LQAGNLLRIKVNLSHGTILENQKVLANLQCPKAVAHCQKTGNTAVLEHPRGRHHNTNLKV
FTKDFHLLYQMDSFSLILQSSFRFNISDVAFGSDGDVVVSDCDQGLICSLGNLQNHPVLT
PLVGDRLIRPAGLVILSNTLVTVDGGDHTVKIYSSKPGA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaccagagtcctgatctcccacatcgctgctgcccgagtccagaggcgaccctgagg
gaaatccagctcaacttactggagtgtaaagtctgcttcgagacgtttaactcgcaacag
agggagcgcagaccacagaacctttcctgtggtcatgtactctgtctggaatgcatcaca
gctttgtcccatcctctcctgaggaagctggagtgcccgttctgtcgacagctgtgcagt
gttgacagcacctcccattgccaggttcttagtgacctgcaggagctccttttgtcccag
ataccctcgtcctccgctccccctcacagggccagaggaggatttgtctcggaaacagct
ctgcatcttcttgctgcgtttgggggctggggcaccctcatcaaccccactggaatcgcc
gttttggggtctgcggggggagtagtcgtggtgcatgacggagagaagagagtggtggtg
tttaaccaacatgggaggaagctgcacagttttggagagaaaggaacaggcaatggggac
atctgttacccggtggatgtggcagtgagccctactggttatatcgtagtgacagatgca
ggggataaatctgtgaaggttttcacgtccaggggagtacacgtagtgacggtcaaagat
tgcttccaacttccttggggcgtggacacagactgtagtgggcacatcctggtttctgac
ctccaggctggcaatctgctcagaattaaagtgaacttaagtcatggcactatcctggag
aatcaaaaagtcctagccaaccttcagtgtcccaaagcggtggctcactgccagaaaacc
ggaaacacagccgtattggagcatccaagaggaaggcaccacaacacaaatttgaaggtg
tttacaaaagacttccaccttctttaccagatggacagcttcagcctgatcctccagtcg
tcctttaggttcaacatatcagatgtggctttcggcagtgatggagatgtggttgtgtcc
gactgcgatcaggggttgatttgtagtttaggaaaccttcagaaccatccagtcctgact
cctcttgtcggggaccgtctcattcgacctgctgggttggtaatactgagcaacacgctc
gtcacagtggacggtggcgaccatacggtgaagatttattctagtaaacccggagcttga
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