Poecilia reticulata (guppy): 103478665
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Entry
103478665 CDS
T05149
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103478665 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pret03400
]
103478665 (rad54b)
DNA repair and recombination proteins [BR:
pret03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
103478665 (rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Nodulin_C
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
103478665
NCBI-ProteinID:
XP_008430870
UniProt:
A0A3P9Q0A8
LinkDB
All DBs
Position
LG16:16248018..16264711
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AA seq
937 aa
AA seq
DB search
MRRSGAPSQLLGNAVKKPRFVPPGGSASCPVAESKPLVPKLGLGNALDKVQRSLSAAVVN
KSTCSVQGQTGRTASGLSKVLARVLTATESKENEDDTKYEDCAEDMNVSAGGVDGGPQWT
HASPQTPQPPADSPQVSGAAGSDGVRYFSVVWCKASKKKHKRWEGDAVLVARGRTVVLKD
MEGKDIGKGSGYKVSELASLSEGETLMIGGKEIEVMGIVSAEDFAKGRCFQEVQTDQEEL
HAKAAPPPPRRLNPKPFCPPTMLGRAGHPENKPQAEQTSKPRHDPLAPGALVMPRPSSNH
QWLHNKSGFPVVDVVVDPHLTTHLRPHQREGILFLYECVMGMRAAGRHGAILADEMGLGK
TLQSVALCWTLLKQGPYGGKPVTKRVLVVTPGSLTQNWRAEFTKWLGRERISVFTVDQDH
RMEEFLSSPLHSVLVISYEMLLRCLEPIQKVEFGLIICDEGHRLKNSSIKTSSALSSLSC
NRRVILTGTPVQNDLQEFYAIIEFVNPGILGSTTAYRKVYEEPILHSRQPSCSEDERVLG
EERAAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCTPSPLQQKLYKHLLCHRVFRACM
QGCTQGSAHLACITALKKLCNHPGLLHDTVKERTERGSMESSLYEGLADLFPESYCSAGF
DTADSGKLLVLSDLLTAIRQLSPSDRVVLVSNYTQTLDLLQDLCVRSGYTFCRLDGQTPT
SQRQRLVDAFNSPYSQSFLFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMARVWR
DGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKAAEHTSFSASELRDLFSLT
DTPCLTHDLLSCSCSMDGSANDVEVEEAELVPDRPCQLGRQGDRRGAAQKHLSMSELMQW
RHFSGDTHTFSDPYLDHARSHITFAFQTTISHTPSEQ
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgctcaggagctcccagtcagcttttgggtaatgctgtgaaaaaacctcgcttt
gtgccaccaggaggatctgcttcatgccctgtagcagaatcaaagcctctagtccctaaa
cttgggttgggaaatgctctggataaagtccagagaagtctttcagcagcagttgtgaat
aaatcaacctgcagtgttcagggccaaacgggtcggactgcttcaggtttgtccaaggtg
ctggcccgtgttctcactgcaactgagagtaaagaaaacgaggacgacacaaaatatgaa
gactgtgcagaggacatgaatgtttctgcaggaggagtagatggaggcccccagtggacc
cacgcgtctcctcaaacccctcagcctcctgcagattcacctcaggtctcaggagctgct
ggctcagacggagtccgatacttcagtgtggtttggtgtaaagccagcaagaagaaacac
aagcgctgggagggggacgccgtgctggttgccagagggcggacagtcgtactcaaagac
atggaggggaaggatattggaaaaggtagtggctacaaggtgtcagagctggcctcgctg
tctgagggagagacgctgatgattggagggaaggagatagaggtgatgggcatcgtctct
gctgaggactttgccaaaggtcgttgtttccaggaggttcaaactgatcaagaggagctg
cacgctaaggcggctccgcctcctcctcgccgcctcaaccccaaacctttctgcccccca
acaatgttgggcagagcaggacatccagaaaataaaccacaagcggagcaaaccagcaaa
cctcgtcatgacccactagctccaggtgccttagtgatgcctcgcccctcttccaaccac
cagtggcttcataacaagtcaggctttcctgtggtcgacgtcgtcgttgacccacacctg
accacgcacctgcgaccccaccagagggagggcattctcttcctctacgagtgtgttatg
ggcatgagagctgcaggtcgtcacggtgccatcctggcggatgagatgggccttgggaag
acgctgcagagcgtggcgctctgctggacgttgcttaagcagggaccttacggtgggaaa
ccagtcacaaagcgtgtccttgtggtcactcctggcagcctcacgcagaactggagagca
gagttcaccaagtggctcggccgggaacggatcagtgtcttcactgtggatcaggaccac
aggatggaggagtttttatcctcccctcttcacagtgttctggtgatcagctatgagatg
ctgctgcgctgcctggagccgatccagaaagtggagtttggtcttataatttgcgatgag
ggtcacagactgaagaacagcagcatcaaaacgtcctccgccctcagcagcctcagctgt
aatcgcagagtcattctcacagggaccccagtccaaaacgacctgcaggagttctacgcc
atcatagagtttgtgaacccgggaattcttggttcgaccactgcgtatagaaaagtttat
gaagaaccaattctacactccagacagccgtcctgctctgaggacgagagagttttgggg
gaagagcgcgctgctgaactctctcgtctcaccggcatgttcatcctgcggcggacgcag
gagatcatcaaccgctacttgccgcctcgtctggactggaccttgttctgcacgccttcg
ccgctgcagcagaagctgtacaaacacctgctctgccaccgcgtcttcagagcctgcatg
cagggctgcacacagggcagcgcacacctggcctgcatcactgcgctgaagaagctctgc
aaccatcctggcttgctccacgacaccgtcaaggagagaacagagcgcggatctatggag
agctctttgtacgagggacttgcagatctcttcccagaatcctattgttcagcaggattc
gacaccgctgactccgggaaactcttagttctgtccgacctgctgactgccatcagacag
ctcagcccttcagaccgggtggtcctggtgtcaaactacactcagactttggacttgctt
caggacctgtgcgttcgttccggctatacgttctgccggctcgacggtcagacgcccacg
agccagaggcagcggctggtcgacgccttcaacagcccctactctcagagcttcctgttc
ctgctgagctccaaagcaggcggcgtggggctgaatctgatcggagcgtcgcacctggtg
ctgtacgacatcgactggaaccccgccaacgacattcaggccatggctcgggtatggaga
gatggacagaaaaagacggtgcacatttaccgtctcctcactgcaggcaccattgaggag
cgtatatttcagagacaggtgtccaaacaggggctgtccgggacggtggttgacttggga
aaagcagccgaacacacaagcttctccgccagcgagctgcgagatcttttcagcctgacg
gacacgccgtgtttgacccatgacctgctgagctgcagctgcagcatggacggctcggcc
aacgacgtggaggtggaggaggcggagcttgttcccgacaggccatgccagctcggtcgt
cagggcgaccgcaggggggcggcacagaagcatctcagcatgtcggagctcatgcagtgg
agacacttctccggtgacacacacaccttctcagacccttacctcgatcacgcacgaagc
cacatcaccttcgccttccagaccaccatctcccacacacccagcgaacagtga
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