Poecilia reticulata (guppy): 103478773
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Entry
103478773 CDS
T05149
Symbol
cnot10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103478773 (cnot10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103478773 (cnot10)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103478773 (cnot10)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
ARM_TT21_N
TPR_12
TPR_14
ANAPC3
ARM_TT21
TPR_8
TPR_7
TPR_MalT
APOBEC4_like
Motif
Other DBs
NCBI-GeneID:
103478773
NCBI-ProteinID:
XP_008431031
UniProt:
A0A3P9PZ29
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Position
LG16:complement(31325789..31341715)
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AA seq
732 aa
AA seq
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MADNSELNEAKHNGSPSSGMTDQEKEMATSAYEAFLVGKYDESLKQLEALQELNKEDYKI
SLNKAVLEFYRSGQTATGLLKQTLSAMKNRLHTATEDVDGLEDVENSLLYYNQAIIHYHM
RQYSEAISIGEKLYQFLEPFEEKFAQSVCFLLVDLYLLTFQPEKALHLLAVLDKISVQGS
NKNGKAESNNSGSNQKVEFVAMMEAAKSKIHQYKVRAYIQMKSSKACKREIKSVMNTAGN
SAPSLFLKSNFEYLRGNYRKAVKLLNGSNMAEHPGPIRTGECVRCMFWNNLGCIHFAMGK
HNLGIFYFKKALQENDHTCAQLGDGGNNQCKRLSAVPMCALLSNKRYELLYNCGVQLLHA
ARPLAAFECLMEAVQVYHSNPRLWLRLAECCISANKGGSEQESKSLPSKKGIVQSVIGQG
YHRKIVLASQSSQNTNYSEGQSAAIPVASMEFAAICLRNALLLLPEHQQPDAKAESSSKN
SSQSGSTESGGENSDPCSGKSQEADKFFSATPSSPLRKQEVENLRCSILACSAYVALALG
DNLLALHHADKLLHQTKVSGSLRFLGHLYAAEALISLDRISDAITHLNPENISDVSLGML
SSEQDQGHEKGDEPIEPSAKKMPLFYPSSVAAAQAMMLFNLGSAYCLRSEYDKARKCLHQ
AASMMNSKEIPPEAILLGVYLELQNGNTQLALQIIKRNQLLPLTLHRSSPDPRKKPSQPL
QLPSSFTQVQRK
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaacagcgaattaaacgaagcaaaacataacggctcgccgtccagtgggatg
acggaccaggagaaggagatggcaacgagtgcatacgaagcttttctggttggaaagtat
gacgagtctctgaaacagcttgaagccttgcaggagctcaacaaagaggactacaaaatt
tctttgaataaagctgttttagagttctacagaagtggccagactgcgacgggtttgttg
aagcagaccctttcagcgatgaagaatcggcttcacacagcaacagaagatgttgatggc
ttggaggatgttgagaatagtttgctgtactataaccaggccatcatccactaccacatg
cgccagtactctgaggccatctctataggagagaagctctaccagttcctcgaaccattt
gaagagaaatttgcccagtcagtgtgcttcctgttggtggatctctacctgctgacattc
cagccagagaaggcgctccacctactggctgttctggacaagatctctgtacaaggaagc
aacaagaacggcaaggcagagagcaacaactcgggatcaaaccaaaaggtggagtttgta
gcaatgatggaagcagccaaatccaaaatccatcagtacaaagtgagagcgtacattcag
atgaagtcctccaaggcctgtaagagagagattaaatcagtgatgaacacagcagggaat
tctgccccctctctcttcctcaaaagtaactttgagtatctgagaggaaactaccgcaaa
gcagtgaagctactgaacggctccaacatggcagagcatcctggacccattagaaccggt
gaatgtgttcgctgtatgttctggaacaatctgggctgcatccactttgcaatggggaaa
cacaaccttggcatcttctacttcaagaaggcgctgcaggagaacgatcacacttgcgca
caactgggagacggcggcaacaaccagtgtaaaagactgtcagctgttcctatgtgcgcc
ctgctgtccaacaagcgttatgagctgctgtataactgtggcgtccagctgctgcacgcc
gccaggccgctagcagcctttgagtgtctgatggaggccgttcaggtttaccactccaac
ccacgcctgtggctgcgcctggctgaatgctgcatctctgctaacaaagggggctccgag
caggaaagcaagagtttacctagtaaaaagggaatagtccagtctgtaattggacaagga
taccatcgcaagattgttctggcatcacagtcttcacagaacaccaactacagtgaaggc
cagtctgctgccatccctgtagccagtatggagtttgctgccatctgcctgcggaacgcc
ctgctgctgctgcctgaacaccagcagccagatgccaaggctgaaagcagctccaagaac
tccagccaatcaggaagcacggagagcggcggtgagaacagtgacccctgcagtggaaaa
agtcaagaagctgataagtttttttctgcaactccatcgtctccacttcgaaaacaggag
gtggaaaacctcaggtgttccatcctggcttgtagcgcctatgtggctctggccctggga
gacaacctgctggctctgcaccacgctgacaaactgcttcatcaaaccaaggtgtctggc
tccctcaggtttctgggtcacctgtatgctgctgaagctctgatctcattggacagaata
tctgatgcaatcactcacctgaacccagagaacatcagtgacgtgtcactgggcatgctc
agcagcgagcaggaccagggacatgagaaaggagatgagcccatagagccatcagctaag
aagatgccgctgttttaccccagcagtgtggcagcagcgcaggccatgatgctcttcaac
ctgggcagcgcctactgcctgaggagcgagtatgacaaggcccgcaaatgcctacatcag
gctgcatccatgatgaactccaaagagattccgcctgaagccatcctgctgggcgtctac
ctggagctacaaaacggaaacactcagctggctctgcagatcatcaagaggaaccagctg
ctacccttaacccttcacaggtcctcgccagaccctcgcaagaaaccttcccagcccctc
cagttgccctcatccttcacacaagttcaacggaaataa
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