Poecilia reticulata (guppy): 103478821
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Entry
103478821 CDS
T05149
Symbol
pop1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103478821 (pop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pret03009
]
103478821 (pop1)
03016 Transfer RNA biogenesis [BR:
pret03016
]
103478821 (pop1)
03029 Mitochondrial biogenesis [BR:
pret03029
]
103478821 (pop1)
Enzymes [BR:
pret01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
103478821 (pop1)
Ribosome biogenesis [BR:
pret03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
103478821 (pop1)
Transfer RNA biogenesis [BR:
pret03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
103478821 (pop1)
Mitochondrial biogenesis [BR:
pret03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
103478821 (pop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
103478821
NCBI-ProteinID:
XP_008431103
UniProt:
A0A3P9Q9W7
LinkDB
All DBs
Position
LG16:complement(33151420..33162282)
Genome browser
AA seq
960 aa
AA seq
DB search
MSAAKAKMREKKMRNQPASVQYPSSSHVESRAETENGERGDDLRVTGGQSDAHPSWKRQR
TPPVRHGWVRGHHKGGGGYDTEMPNHITAGAFARARAAEVSAMLKAATETTGSSHVFRAL
PKHMRRRAMSHNTKRLPRRLRDVANRMREKSLQAGSKKKKELVKSKSRKARRRHGNLLLE
FNRRQRKNIWLETHIWHAKRFHMVKKWGYCLGVRPTYKCYRPCYRAMSSHCLLQDLSYYC
CIELKGEEDKLLAALTQLTCKEAGPTFAAAMFLSGARQGSVTVYRAGRYPSDPLGPVAFL
WRPQTPGLTPRQLWIWAHPALKQDLLPELQSVCQCSEAVAPSVEPEVSHAEADPAPQAEP
NPDNELKAGAKRKRCCKDAGEPPAKRILGDGTRLPTSPVTWRSSSTGIVINDLTMEMVRY
RLIGPQSHSVLAETLEAATVCDELKSSPFWWPEHCKDRSNMKLHQQQTDVFNVLKGIYSS
GELPPGTVLGLTVDDPRLTLPRQKVKAVPCVNQDQGDEKRKQLMLKGVPLQCCQSFLWER
SVRENVTDNKISEQELNRMRSELLVPGSRLGPGPQQGRVPVLLVHQPGKQVGDELGSWGS
GWDLLLPKGWGMAFWVPLVYRGVRVAGLHMSLKHSQNKAAPHFPHDYPDCPAGSRFQEEQ
EAEFLDTFKRRPPAKRTNYIKHGCLAPFRCPWQQLAEEWELLATDGGAERKGDGQTQMTR
KSHEVMEEVTSQQTVAAASPPSCFTVLRNRKSLRLLSSWCRPPTCRGQRRGHGAAVALPL
SDSAATSFHAAHKMSVVWVRLTLLSKGKPEAHAMVCAPTAEDLKLFGKSPESCGPQEPPH
KDHYKSRINRKKKSSKTATPSQVSDDLTASTDPHLPSDLILGLWPDPLLSVTSHCSRVTL
GWVTQGDFSLSVGRGEALGFVSISGLLHTLLRQPPELRGTLLLRNPASLHYRFVRLNIDV
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagcgaaagcaaaaatgcgtgagaagaagatgaggaaccagcctgccagtgtg
cagtatccatcttcttctcatgtggagagtagagcagagacagaaaacggtgaaagagga
gatgaccttcgtgtcaccggtggtcaatcagatgcacatccttcttggaagaggcagcgg
accccacccgtcaggcacggatgggttcgtggacatcacaaaggtggcggtggttacgac
acagagatgcccaaccacatcactgctggagcttttgctagagccagagcagcagaggtg
agcgccatgctgaaagcggctaccgagacgacgggcagcagccacgtgtttcgggctctg
cccaagcacatgaggcggcgggccatgagccacaacaccaagcggctccctcgcaggctg
agagatgtggctaacaggatgagggagaagagcctccaggctggctcgaagaagaaaaaa
gaactggtgaagagcaagagccgcaaagctcgccgtcgccatgggaacttgctgctggag
ttcaaccggcgccagaggaagaacatttggctggagacgcatatctggcacgccaagcgt
ttccacatggtgaaaaagtggggatactgtctgggggtcagacccacatacaaatgctac
cggccatgctacagagcgatgagcagccactgcctcctacaggatctttcttattactgc
tgcattgagttaaagggggaggaagacaagctgctggctgctctgactcagctgacatgc
aaggaggctggtccgacgtttgctgcagccatgttcctgtcgggggccagacagggcagc
gtcacagtgtaccgggcgggccggtacccttctgaccccctgggacctgttgcctttctc
tggagaccccaaacaccaggactaaccccccgacagctgtggatctgggctcatcctgct
ctgaaacaggatctgctcccagaattacaaagcgtgtgccaatgttccgaggccgtggcg
ccctctgttgaaccggaggtctcacatgcagaggctgatcccgcccctcaggcagaacca
aaccctgacaatgagctgaaagctggagccaagagaaagcggtgctgtaaggatgccggt
gaacctcctgcaaagaggattctgggagatggaaccagattgcccacctccccggttacc
tggaggtccagctcaactggaatagttataaacgatctcacgatggagatggtacgctat
cgtctgattggaccacagtctcattctgtgctggcagagactttggaggcagctacagtc
tgtgatgaactgaagtcttctcccttctggtggcctgagcactgcaaagaccggagcaac
atgaagctccatcagcaacaaacggatgtctttaatgtactgaaaggcatctattcatct
ggagagctccccccgggaacagtgctggggttgaccgtggacgacccccgactgactctg
cccagacagaaggttaaagccgtgccctgtgtgaaccaggaccaaggtgacgagaagagg
aagcagttgatgttgaaaggagtcccactgcagtgctgccagagcttcctgtgggagcgg
tctgtccgggaaaacgtcactgacaacaagatatctgagcaggagctgaacaggatgagg
agtgaactgctggttccgggctccaggctgggccccggcccccaacagggccgggtcccc
gtcctcttggttcaccagcctggtaagcaggtgggcgacgagctgggctcctgggggtcc
ggctgggacctactgcttcctaaaggctgggggatggccttctgggtcccgctggtgtac
agaggggttcgagtcgccggtctgcacatgagtctgaaacactctcagaacaaagcggct
ccccactttccccacgattatccggactgccccgcaggatcccgctttcaggaagagcag
gaggccgaattcctggacacatttaaaaggcgtcctccagccaagaggaccaattacata
aaacatggctgtctggctccttttcgttgcccctggcaacagctggcagaggagtgggag
ctcctggcgacagacggaggagcggagaggaaaggagatgggcagacccagatgaccagg
aagagccacgaagtgatggaggaagtgacatcacaacagactgtagctgcagctagtcct
ccgagctgcttcactgttctgaggaacagaaagtctctgaggcttctctccagctggtgc
agacccccgacatgcagaggacagaggcggggtcacggggcagcagtggcgctccctctc
agcgactcagcggcgacgtctttccatgccgctcacaagatgagtgtagtgtgggtgcgc
ctgacgctgctgtccaaagggaaaccagaagcccatgccatggtgtgcgcaccgactgca
gaggacctgaagctgtttgggaagagcccagaaagctgtggccctcaggagcccccccac
aaagaccactataaaagtagaattaaccgcaagaagaagagctccaagacagcaactccg
tcacaagtatcagatgacctaactgcatccacagacccccatttgccctctgacctcatt
ctggggctctggccggaccctctgctgagcgtgacatctcactgctcccgggtgacgctg
ggctgggtcacccagggggacttctccctgtctgtggggcgtggggaggctctgggcttt
gtcagcatctccggtctgctccacacgctcctcaggcagccgccggagctcagaggaacg
ctgctgctgcgcaaccccgcctccctgcactaccgcttcgtcaggctcaacatcgacgtg
tga
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