Poecilia reticulata (guppy): 103478875
Help
Entry
103478875 CDS
T05149
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
103478875 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pret03036
]
103478875 (chd8)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103478875 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HDA2-3
HTH_Hrp3
MUN
PRIMA1
HphA_C
Motif
Other DBs
NCBI-GeneID:
103478875
NCBI-ProteinID:
XP_008431186
UniProt:
A0A3P9QEU5
LinkDB
All DBs
Position
LG17:complement(966387..990032)
Genome browser
AA seq
2620 aa
AA seq
DB search
MADPIMDLFEDTPLFNLDSLPDDSFSHGSSDPVEEALKLALGQAVPTGEPESSPDLAIST
SLGVPVAAPVIPDPAPVHVPTQQPVPAASIQTVSVAQAVDAGAAAFMTSAPTPVETVPQM
QTTIPVASGASSSTVLLSSPLTVSSSPATTATTQQLTQITHQLTPQQLAAITQQAGGKIV
ILKGPQGQAQVLQAISGTAGQAGGKVIRLLSGTPLKPGMSILQGGTVLNQASPGQTQVKV
GAAGVQRLLQSANGPVKQVLLTSMPQQTQGQTVQVQIPAQAQMAQGQTTVQVQPQPQTAQ
IQVQSQGQTTQIQLQPQAQTAHIQVQAPGQAAQPQVQTQGQVQLQPAMQGQTQGGEAKRI
TLVLQQPSQSVSAAPAGQAVTAQQQVAPGGQQQPTQAPARLVLGQLPSGKLVLQGSQLAA
LTQARAAGQAGGQPKVLTIQLQVQQQPNQQGGVKYQLVSGAGGTGSPQVLQISQGQGGQR
VAVPLKMLLQPQTSSATSSGGTVSVVKVINPSTAAPPATTTTPSQAIRITKAPGEPAAVR
RVEILCKQEKANRIVAEAIARAKARGEKNLPRVLNQDELPSTQTSPEMGGTLTVVSTAKK
KSSGGGSKKKSPISGGPIPKIIVGTDKKGKVVKISGGTIAVSGGAVIAGAGNKSKSKAKA
NTITLVGAKKRKRNASSDVSDGELSPPSPVALEDDMIMKRRSNRVVKRKKYTEDLDIKIT
DDEDEQEDVDVTTTAAAVASISGGAAAQLKQEVELDGNGQPSMQFFVENPSEEDAAIVDK
VLSMRITKKEVFPGQYTNAEEFFVKYKNYSYLHCEWATLEQLEKDKRIHQKIKRFKTKHA
QMRHLFQEDEESFNPDYVEVDRILDVSHSVDKDNGEPVIYYLVKWCSLPYEDATWELKED
VDEGKVEEFGKIQNRQPRLKRSARPPASSWKKLEETREYKNGNTLREYQLEGVNWLLFNW
YNRQNCILADEMGLGKTIQSITLLSEVYAAGVQGPFLVIAPLSTITNWEREFSTWTDMNA
IVYHGSLASRQMIQQYEMYCKDDKGHLIPGAYKFDALITTFEMVLSDCPELREISWRCVI
IDEAHRLKNRNCKLLDSLKMLDLEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSEIEFL
REFGDLKTEEQVQKLQSILKPMMLRRLKEDVEKNLAPKQETIIEVELTDIQKKYYRAILE
RNFSFLSLGANSNSNVPNLLNTMMELRKCCNHPYLINGAEEKIVAELREKYDPLAPDFHL
QALIRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLINKRYLYERIDGRVRG
NLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHR
IGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKDSNVNGLQQFSKKEIE
DLLRKGAYAAIMDENDEGSRFCEEDIDQILQRRATTITIESEGKGSTFSKASFVASENRT
DIALDDPEFWQKWAKKADIDMDSINQKNTLVIDTPRIRKQTRQYSSLRGEGGDLSDLDSD
EEYPPANSRHSRSSRRSDRHSGGGYGRTDCFRVEKHLLVYGWGRWRDILAHARCKRRLSE
RDVETICRVILVFCLMHYRGDENIKSFIWELITPPENGREPQTLLNHSGLSIPVPRGRKG
KRVKAQSTFDVQKVEWIRKYNPDTLLLDDSYRKHLKHQCNKVLLRVRMLYYLKQEVIGEH
AESVLKGADIRDVDIWMPEMEQQEVPAAWWDSDADRSLLAGVFKHGYEMYTTMRADPCLC
FVERVGRPDDKAIDAEQHTGDAELGDDGDFDKFSEDPEFKPASRLSKDLFDEPDSMNVDD
EISVEDKPVPMVTESAAIQSGVCEWPSSSSLTARLRRLITAYQRSYRQEQLKIEAEAKGD
RRRRRCEQASKLKEIARQERQQRWTRREESDFYRVVSTFGVEKIKKELGVSEEGDAEFNW
TRFRTFARLDKKTDESLSRYFRSFVAMCRRVCHLPQGRGEDPSELTQTQTVAPITEERAS
RTLYRISLLRRLRERVLPHPSLEERLLLAPRSAELPAWWSLPDHDRQLMLGASLHGVSRT
ELSIFSDPQFTFSSARDEFIQNQQALPPPPPPPPPPPAPSIMTLSQSKSEMGLPGAKGEG
ADESAQLFGGRIGSDLQSTPLALGHHGGKAQGPDWSFKSSRDRTEKTGRKGEGGSDSDSD
SDSGSSSSERSGSSDDSGDSDEEVEGGGMKVGDVDEENSLLSMIPSQDSILPPEPIRVEW
PKDRVLINRLDNLCHLVLSGQWPSGRRYIPEAQLNPSSELVGEDMAYTRVIRKPSSAPTS
IGAEGEDGEFTVKLLKEEGLKLTFSKQALLPNGSGGESSGRKKRKDQELSELDGLHDPLE
RAPRRRDPPTWLKENPDYEVEGDMLELLVNRSKRKRRRRANKPLTGTEKVKVINMLTGKK
VGAAFCPMLQDLKEYLEENPNIAVAPEWSETVQKSGLLPESLFHRLLTEHSEIPKKSHRR
RHHHHHHHHHHHYHTPEPTPEDPTLDGVEEETLVSDGAYMMDEEDLETSHHFLTSPDFDV
KMEGGDSLSQGDYDSSDQEALLDDVIMAQKDSDSSSSSDD
NT seq
7863 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcccattatggacctcttcgaggacactcccctgttcaacctagactccctg
ccggacgactccttctctcatggttcctcagaccccgtggaggaagctctgaagctggct
ttggggcaggccgtcccgacgggcgagccagagtcctctcccgacctcgccatcagcacc
agcctcggcgttcctgtagcagctccggtcatcccggacccggcacccgttcacgttccc
acccagcagccggtgccggcggcgtccattcagactgtttctgttgcccaggccgtcgac
gccggagcggcggccttcatgacctcagcccccaccccggttgagactgtgccacagatg
cagactaccatccctgttgccagcggggcgtccagtagcaccgtcctgctgagctcacct
ctgactgtttccagttccccagcgaccactgccaccacgcagcagctgactcagataacg
caccagctcacgccccagcagttagccgccatcacgcagcaagccggcgggaaaatcgtc
atcctcaaaggtccccagggtcaggcccaagtgctgcaggccatatcgggaactgcgggt
caggccggtggaaaggtcatccgtctgttgtctggcacgccgctcaagcccggcatgtcc
atactgcagggaggtacagtcttaaatcaggccagcccaggacagacccaggtcaaggtg
ggggccgcaggggtgcagcgcctgctgcagtccgccaacgggccggtcaagcaggtgttg
ctcacgtccatgcctcagcagacacaaggtcagaccgttcaggtgcagattccagcccag
gcacagatggctcaaggtcagactactgtccaggttcaacctcagccccaaactgctcag
atccaagtccagtctcagggccagaccacccagattcagctccaaccccaggcccagact
gcccacatccaggtccaggctccgggccaggcagctcagccccaggtccagacccagggt
caggtgcagctccagccggctatgcagggccaaacgcagggtggcgaagcaaagcgcatc
accctggttctccagcagccgtcccagtccgtctccgcagcccctgcgggtcaagccgtt
accgctcaacaacaagtggcacccggaggtcaacagcagccaacgcaggcccctgccagg
ctggttctgggtcagctccctagcggcaaactggtgctccagggaagccagctagcggct
ctgacccaggcccgggctgcaggtcaggccggggggcagcccaaggtcctcacaatccag
ctgcaagtacaacagcagcccaaccaacaaggaggagtgaagtaccagttggtatcgggg
gctggcggcaccggcagcccgcaggtgctgcagatttcccagggccaaggaggacagcgg
gtcgccgtacctctgaaaatgctgctgcagccgcagacaagctcggccacatcttcgggc
ggcaccgtctccgtggtgaaggtcatcaacccgtcgacggcagcccctcccgctacgacc
acgactccatcgcaggcaatccgcatcaccaaggcccccggcgagcccgcggccgtccga
cgcgtggagatcctctgcaagcaggagaaggcaaatcgaatagtggcagaggccatcgct
cgggccaaagcacgtggcgagaagaacctgcccagagtcctgaatcaggacgagcttccg
tctacgcaaacctccccggagatgggagggactctgactgttgtctcgactgctaaaaag
aaaagcagcggtggggggagcaaaaagaaaagtcccatatccggaggaccgatacccaaa
atcattgtggggaccgacaagaagggcaaagtggtgaaaatatcaggagggacgattgca
gtgagcggcggcgcagttatagccggagccggaaacaaaagcaagagcaaggctaaagca
aacactattaccctggtaggagcaaagaaaagaaagaggaacgcatcttcagacgtctct
gatggggagctgagcccaccttcacctgtcgcactggaggacgacatgatcatgaagagg
cgctccaaccgtgtggtgaagaggaagaagtacacagaggacttggatattaagataacg
gacgacgaggatgagcaggaagacgtggacgttaccacgacggcagccgccgtggcctcc
atcagcggaggggcggcagctcagctgaaacaggaagtggagctcgacggcaacggacag
cccagcatgcagttttttgtggagaatccgagtgaggaagatgccgccatcgtagacaaa
gtcttgtcaatgaggataaccaagaaagaggttttcccgggccagtatacgaatgctgag
gagttctttgttaaatacaaaaactattcatacctgcactgtgagtgggccacgctggag
cagctggagaaagacaagaggatccatcaaaagatcaagagattcaagaccaaacatgct
cagatgaggcatttgttccaggaggatgaggagtctttcaacccagactacgtggaggtg
gacaggatcctcgacgtgtcccacagcgtggacaaagacaacggcgagcctgtcatctac
tacctggtgaagtggtgctctctgccttacgaagacgctacttgggagctgaaggaagac
gtcgacgaggggaaagttgaagagttcggcaaaatccaaaacaggcagcctcgcctgaag
agatcggcgcggcctcctgccagctcatggaaaaagttagaggaaacccgagagtacaag
aacggcaacacactcagagagtatcagctggaaggagtcaactggcttctcttcaactgg
tacaacaggcagaactgcatcctggcagacgagatgggtctggggaagaccatccagtcc
atcacgctgctgtccgaggtgtacgccgccggagttcaaggccccttcctggtcatcgct
ccgctctccaccatcaccaactgggagagggagttctccacctggaccgacatgaacgcc
attgtgtaccacgggagcctcgccagccggcagatgatccagcagtatgagatgtactgc
aaagacgacaagggacatttaatcccaggcgcgtacaagtttgacgccctcatcacaacc
ttcgagatggttctgtcggactgcccggagctgagggagatctcgtggcgctgcgtcatc
atcgatgaggcccaccggctgaaaaaccgaaactgcaaactgttggacagcttgaagatg
ctcgacctggaacataaggtgctgttgaccggcacgcctcttcaaaacaccgtggaggag
cttttcagcctccttcacttcctggagccagctcagttcccgtctgagatcgaattcctc
cgagagttcggagacctcaaaactgaggagcaggttcagaaactgcagtccattttaaaa
cctatgatgttgcggagactcaaagaagacgtggagaagaacttggcacccaagcaggag
accattattgaggttgagttgactgatatccagaagaagtactaccgggccattctggag
aggaacttcagcttcctgagtttaggagccaacagcaacagcaacgtccccaacctgctc
aacacgatgatggagctccgaaagtgctgcaaccacccctacctcattaacggtgccgaa
gagaagatcgtggcggagttgcgggagaagtacgaccccctggccccggactttcatttg
caggccctaattcggtccgccggcaaactggtgctacttgataaactgctgcctcggctg
aaggccggcggccacaaagtgctcatcttctcccagatggtgcgctgcttagacattctg
gaggactacctcatcaacaagagatacctttacgagagaattgacggaagggttcgtggg
aacctgcgacaggcagccatcgatcggttcagcaagccggattcggatcgcttcgtcttc
ctcctttgtacccgtgctggcggtctgggtattaacctgaccgccgccgacacctgtgtc
atatttgactctgactggaaccctcaaaacgacctgcaggcccaagcaagatgccaccgt
attggccagtcgaaggcagtgaaggtctatcgcctcatcaccaggaactcctacgagagg
gaaatgctggacaaagcgagtctgaaactcggtctggaccgtgccgttctacaaagcatg
agcggcaacaaggacagcaacgtcaacgggctccagcagttctccaagaaggaaatcgag
gaccttttgaggaaaggagcttacgccgccatcatggatgaaaacgacgaaggcagtcgg
ttttgtgaggaagacatcgaccagatccttcagcggcgagccaccacaattactatcgag
agcgaaggcaaaggttctacgttctccaaagccagcttcgtcgcatccgagaaccgcaca
gacatcgccctggatgaccctgagttctggcagaagtgggccaagaaagccgacatcgac
atggattccatcaatcagaagaacacgcttgtgatcgacactcccaggatccggaagcag
acgcgccagtactccagtttgcgaggcgaaggaggagacctgtcggatttggacagcgat
gaagagtatccgcctgccaattcaagacactccagatcttcccgccgctccgaccgccac
agcgggggaggttacggccgtaccgactgtttccgggtggagaaacacctccttgtctat
ggatggggtcgctggagggacatcttggcccacgccagatgtaaacgacgtctgagcgaa
cgtgacgtagaaaccatctgccgtgtcattctggtgttttgtctaatgcactatcgtggc
gacgagaatataaagagtttcatctgggagctcataacgccaccggagaacggcagggaa
ccccaaacactactaaaccactctggcctttctatccccgttccaagaggcaggaaaggt
aagagggtcaaggctcagagcacgttcgatgttcagaaggtggaatggatccgcaagtac
aaccccgacaccctgctgctcgacgacagctaccgcaaacacctgaagcaccagtgcaac
aaagtgttgctcagggtccgtatgctctactacctgaagcaggaggtcataggtgaacat
gcagagtctgtcctgaagggggcggacattagggatgtcgacatttggatgccagagatg
gagcagcaggaggtgcctgcagcttggtgggactctgacgcagaccgctcgctgctcgct
ggcgtcttcaaacatggttatgagatgtacactaccatgcgggccgatccctgcctctgc
ttcgtggagagagtcggtcggccagacgacaaggccatcgatgctgagcagcacactgga
gacgccgagcttggagacgatggcgactttgacaagttctcagaggatccagagttcaag
ccagcatctagactctccaaagatctttttgatgagccggactctatgaacgtggatgac
gagatctcagtggaggacaagccggtgccgatggtcacggaaagcgcagccatccagagc
ggcgtgtgcgagtggccctcaagctcttcgctgacggcgcggctcaggcggctgatcacg
gcgtaccaacgcagctacagacaggagcagctaaagatcgaagccgaggccaaaggggac
cgccggcgcaggcgctgcgaacaggccagcaaactgaaggaaatcgcacggcaggaacga
cagcaacgatggacgcggagagaagagagcgacttctaccgtgtggtctccacgtttgga
gtggagaagatcaagaaggagctgggtgtctcggaggagggggacgcagagttcaattgg
acccgtttccgaacttttgcccgtctggataaaaaaaccgacgagagcctcagccgatac
ttccgttcattcgtcgcgatgtgccggagggtgtgccacctcccccaaggccgtggtgaa
gatccgtcagagctgactcagactcagactgtggctcccatcacagaggagcgagcctcc
cgcacgctgtaccgcatcagcctcctgcggcgcctccgcgagcgcgtcctgccccacccc
tccctggaggagcgcctccttctggcgccgcgcagcgccgagctgcccgcctggtggagc
ctgccggaccacgaccggcagctgatgctcggcgcctcgcttcacggcgtcagccgcacc
gagctctccatcttctcagacccgcagttcaccttcagctccgctcgcgatgagttcatc
cagaatcagcaggctctgccgccgcctccacctcccccgcctcctccaccggctccgtcc
atcatgacgcttagccagtccaagtctgagatgggcttacccggagcgaagggggagggc
gccgacgagagcgcccaactgtttggggggagaatcggtagcgacctgcagagcacgccc
ttggccttgggtcaccacggcggcaaagcgcagggtccggactggagcttcaaaagcagc
agggacagaacggaaaaaactggaaggaaaggcgaaggagggtccgattcggattcagac
tccgactcggggtcgtcatcctcagagcgctctggtagcagcgacgacagcggcgacagt
gacgaggaagtagaaggaggcggcatgaaggtaggagacgtggatgaagaaaacagttta
ctctccatgattccatctcaagatagcatacttccacctgagccgatcagagtcgaatgg
cctaaggaccgcgtgctgatcaaccgcctggacaacttgtgccacctggtgctgtcgggt
cagtggccctcggggcggcgctacatccccgaagcccagctcaacccaagctccgagctg
gtgggcgaggacatggcgtacacccgggtcatccggaaacccagcagcgcaccgaccagc
atcggggcggagggagaggacggagagttcaccgtgaaactcctcaaggaggagggtctg
aagctgacgttctccaagcaggctctgctgcccaacgggtcagggggagagagcagcggg
cgcaagaaacgcaaagaccaggagctatcagagctagacggcctccatgacccactggag
cgtgctcctcgacggagggacccccccacgtggctgaaagagaatccagattatgaggtg
gaaggagacatgctggagctgctggtgaacaggagcaagaggaagaggaggaggcgagcg
aataaaccccttacaggcacggagaaggtcaaggtcatcaacatgctgacgggaaagaag
gttggagctgctttctgtccgatgctgcaggatctgaaggagtatctggaagaaaatcct
aatatcgccgttgcacccgagtggtctgagacggttcaaaaatcaggtttgctgcctgaa
tccctcttccaccgcctgctgacggagcactccgagatcccgaagaaaagccaccggcgg
cgtcaccaccatcaccaccaccatcaccatcaccattaccacactcccgagcccacgccc
gaagaccccaccctggacggcgtagaagaagagactctggtttcggacggagcctacatg
atggacgaggaggacctggagacgtcccaccacttcctcaccagcccggactttgacgtc
aaaatggagggcggcgacagcctctcccaaggcgactacgacagctcggatcaagaggcg
ctgctggatgacgtcatcatggcgcagaaggactctgactcttcatcaagctcggacgac
tga
DBGET
integrated database retrieval system
