Poecilia reticulata (guppy): 103478898
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Entry
103478898 CDS
T05149
Name
(RefSeq) leucine-rich repeat-containing protein 16B-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103478898
Membrane trafficking [BR:
pret04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
103478898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Myosin_TH1
Motif
Other DBs
NCBI-GeneID:
103478898
NCBI-ProteinID:
XP_008431220
UniProt:
A0A3P9QF51
LinkDB
All DBs
Position
LG17:1546306..1656606
Genome browser
AA seq
1403 aa
AA seq
DB search
MASKESSAAGFVSVSREITENIKKVLDKQPVKFVRAIKQETRGGKSEDRILVLATWRLYL
FAVKVPTKVEVTFNFLEIRAMNTYPDYQVVIDTDKTTFSLRLQTQEQLDHVVNHINYALS
RVFNNSIYAPPICRAEGDVPDGSQKFSPNSESSLEPPKTCGGFSETYAALCDYNGIGCKE
EVQWDVDTIYHSQDNREFNLLDFSHLDSRDLAVIVASIAYNTWFTKLYCKDMRIGSEVVD
QILHTVSKSNSLEELTLENAGLKADFPQKMASALSENPASVIHSLNLAHNTLDNQGVSNL
IQQVCRLNKGLRLLNLSKTSLSSKGVVSLSQALCSSDDYSNSLLHLDLSKNPGVLSGEDA
TNLYLFLAQPNCLVHLDLSGTDCTVDSLFGALLRGCCADLSYLNLSKNSFSHRRGRDSLP
TFRQFFSSAFSLTHVSLASMKVPPDSLRALFLGLSNNPHISDLHLDISGCELRSAGAAVI
QELFPRVSCVGTLDVSDNGLDADLLAVIPAFSRHPSLKHVMLGKNFNIKGRVLDEILQKL
VHLVQEEECALQSLSLADSRLRHRGTVLVNALGSNACLRKVDLSGNLLEDSGAKMLSKAL
QINTTLRSVTWDRNNTTGVGFQDVARALEHNFTLQFMPLPLCDIAQAYRGAPEKTEQALA
KIQRALLRNNQTQRFSQKQALRLHQGLVTSTAEQVMERLCVRVQQQLCVLKSCEDGDEVQ
TARQILKEARNSRALYPSLCELAHVLSVDGPVKQRLDTLAGELAKAADKELQVVVDSMVS
LCRELCPMSCSAAERLSPPLSSISEQVSIPRSAIRSALMERAAEDINQALEEVKLSVVSY
LTNSIVDQILQELYTTHKTLLRQVSQAKRWDDVGTGRRSVRHSRLVESLDFPDEDFGVNL
GIDTMAIKKRSSRTRRIRPVSTRMSLGDEPSPSPTPSAPSHSTSLTHSASWECLSTLPTN
GSPLRHVTHVRPRPPRRHRAAHIPPESHCSENGGVSMLEDGLPDFYSKRVLPDSQLSSLH
QAQSLRRKKRRSVLSIFSGFRKNRNSTFSNQESECASENVYSMIQHPKDPGRPDSAVPGA
NGTLSSPRPAQGVPAHGLRAASPPCSIQRQSTDLVSMVYSCIGAEIEDSDSSSTCDIKES
SQHSADGSNAISDALTDPRSNGHVASSKHQTDRQMETARQERIVPLTEARTEAGEDVQSS
GVGSARPEPPPHSSKPSLAVIRQRHLQDSSEEAGMPEGEEQSERPQEEKQRGRGPEGQRP
LIPKKPSVDLQRDKTSPEKTKTSPKTPASLEEQNNDQKSLPPAHTASEDNVSSETRSPGL
EDANPTVISHDEEADHNGFPKTSHHTRKSNSFDIGMERDKPCDLERPSDRRFPVKKPTFP
QYRNRSLDFPAGCYEGGNGDGAL
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaaaggagagctcggctgccggctttgtcagcgtgagcagggaaatcacagag
aacatcaagaaggttttggacaaacagcccgttaagtttgtgcgagccatcaagcaggag
acgagaggcggcaagtcagaggacagaatcctggtcctggcaacatggagactgtatctc
ttcgctgtcaaagtgcccaccaaggtggaagtcactttcaactttttggaaatcagagca
atgaacacctatccagactaccaggtggtcatcgatacagacaagaccaccttctcgcta
cgccttcagacgcaggagcagctggatcacgtggtcaaccacatcaactacgccctctcc
cgcgtcttcaacaactcaatttatgctcctccgatttgccgagcggagggagacgtgcct
gatggcagccagaagttttcacccaactccgaatcgtcattagaacctccgaagacctgt
ggcggtttttctgagacgtacgctgccctttgcgactacaatgggatcggctgcaaagaa
gaagtccagtgggacgttgacacgatctatcactctcaggacaaccgggagttcaacctg
ctggacttcagccatctcgacagcagggacttggcagtgattgtggcatccattgcctac
aacacctggttcaccaagctgtactgcaaagacatgagaatagggtcagaggtggtggac
cagattctgcacacggtcagcaagtccaacagtctggaggagctcacgctggagaacgcc
ggtcttaaagcggattttccacagaagatggcgtcggctttatcagagaacccagcctcc
gtgattcactccctcaatctggctcataacacacttgacaaccaaggagtctccaaccta
attcaacaagtctgccggctcaacaaaggtctacgactcctgaatctctccaagacgtct
ctctcctccaagggcgttgtttcattgtctcaggctctgtgttcaagtgacgactactcc
aactctctgctgcacctggacctcagcaagaaccccggggttctgtctggagaggacgcc
acaaacctgtacctgttcttggcccagcccaactgcctggtccatttagacctgtcaggg
acagactgcaccgtggactcgctattcggggccctgctgcgaggctgctgcgccgacctc
tcctacctgaatctgtccaagaactccttctctcacaggagagggagagactctctgccg
actttccgccagttcttcagctcggccttcagcctgacccacgtcagcctggcctccatg
aaggtcccgccggattctctgagagctcttttcctgggtttgtccaacaaccctcacatc
tccgaccttcacctggacatcagcggctgtgagctgaggtcggcgggtgccgccgtgatc
caggagctcttccctcgcgtttcgtgcgtggggactttagacgtctctgataacggtttg
gatgccgacttgttggccgtcatcccagcgttctcccggcacccctccctcaaacacgtg
atgttggggaaaaacttcaacatcaagggcagggtgctggatgaaatcctgcagaaacta
gttcatttggtgcaagaagaagagtgtgccctgcagtccctctctctggccgactcgagg
cttcgccaccggggaacagtgctggtcaacgccctgggctccaacgcctgcctccggaag
gtggacctgagcggcaacctgctggaggactccggggccaagatgctgagcaaggctctg
cagatcaatacgacactcaggagcgtgacgtgggatcgcaacaacaccacgggagtcggc
ttccaagacgtggcgagagcgctggagcacaacttcacgctgcaattcatgcccctcccc
ctttgtgacatcgctcaggcgtaccgcggcgccccggaaaagaccgaacaagccttggcc
aagatccagcgcgcactgctcaggaacaaccagactcagcgcttctctcagaagcaggcg
ctcaggctgcaccagggtctcgtcaccagcaccgctgaacaggtgatggagcgtctttgc
gtgagggtgcagcagcagctttgtgtcctgaagtcctgcgaggacggagacgaggtccag
actgccagacaaatcctcaaagaggccagaaactcgagagctctatacccgtccctgtgc
gagctggcccacgtcctgtcggtggacggccccgtcaagcagcggctggacacgctggcc
ggagagctggccaaggccgcagacaaagagctgcaggtggtggtggactccatggtgtct
ctctgccgagagctgtgtcccatgtcctgctcggccgctgagagactcagcccgcctctc
tcctccatctccgagcaagtctccatccctcgctcagccatccgcagcgctctgatggag
agagcggccgaagacatcaaccaggctctggaggaggtgaagctgtccgtggtgtcctat
ctgacaaactctatcgtggatcagatcctgcaggagctttacaccacccataaaaccctg
ctacgacaggtctctcaggcgaagcgctgggacgatgtcgggacgggtaggcgatccgtc
agacattcaagacttgttgaatcgctagatttccctgatgaggactttggagtgaacctc
ggaatagataccatggcgatcaaaaagcggagctccagaaccagaaggatccgtccggtc
tccaccagaatgagtttaggtgacgagcccagtccctctcccactccctccgctccttcc
cactcgacgtctctcactcactcggcctcttgggagtgcctttccactctccccaccaat
ggctcgcctctgcgtcacgtgacccacgtccggccacgcccgccgcgacgacacagagct
gcacacattcctcctgaatctcattgctctgagaacggaggagtcagtatgctggaggac
ggacttccagatttctacagcaagagagttctgcctgacagtcagctgtcatccctccat
caggcccaatcactcaggagaaagaagaggcgcagcgttctgtccattttctccgggttc
cgcaagaatcgcaactccaccttctccaaccaggagtctgagtgcgcctcagagaacgtc
tactccatgattcagcaccctaaagacccagggaggccagacagcgccgttccaggagcg
aacgggaccttgtcctcacctcggccagctcagggcgtacctgctcacggactgagggcc
gccagccccccatgctccatccaaagacagtccacagatctggtcagcatggtgtacagc
tgcattggggcggaaatcgaggattccgacagcagcagcacctgcgacatcaaagagtcg
tcgcagcacagcgccgacggatcaaacgccatctcggacgccctgacagatccgcggagt
aacggacatgtggcgtcctccaaacaccagacggacaggcagatggagacggccaggcag
gagaggatcgtcccactgactgaggcgcggaccgaggcgggagaagacgtccagagcagc
ggtgttggcagcgccaggccggagccgcctccgcacagctccaagcccagtctggctgtg
ataaggcagagacatctgcaggacagttcagaagaggcaggaatgccagagggagaagaa
cagagtgaaagaccgcaggaagagaagcagagaggacgaggaccagagggacaacgtcct
ctcattcccaaaaagcccagtgtagacctccagagagacaagacctctccggaaaagacc
aagacttcaccgaaaactcccgcgagtctcgaagaacagaacaacgaccagaagagtttg
cctccagctcacacagcgtctgaagacaacgtgagcagcgagacgaggagccctggctta
gaggatgccaatcccaccgtcatcagccacgatgaggaagcagatcataatggattcccc
aaaacatcccatcacaccaggaagtccaactcatttgacataggcatggaaagggacaag
ccctgtgatctggagaggccctcagatcgcaggttccctgtgaaaaagcccacctttccc
cagtacagaaacagatccctggacttccctgctgggtgttacgaaggcggtaacggagac
ggagcattatga
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