KEGG   Poecilia reticulata (guppy): 103479180
Entry
103479180         CDS       T05149                                 
Symbol
wdr48
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pret00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    103479180 (wdr48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pret03400]
    103479180 (wdr48)
DNA repair and recombination proteins [BR:pret03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     103479180 (wdr48)
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_C Beta-prop_WDR75_1st EIF3I NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_EML Beta-prop_DCAF12 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_EIPR1 WD_LRWD1 WDR54 ANAPC4_WD40 WD40_MABP1-WDR62_1st RAWUL WDR90_beta-prop_4th Tfb2_C
Other DBs
NCBI-GeneID: 103479180
NCBI-ProteinID: XP_008431696
LinkDB
Position
LG17:708940..717883
AA seq 568 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVY
QQKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTNLKLFPHFLPVVILNQHLSR
PTLMSFSVVQMELDRSADPPPAIWVSTTKSSVNKWSLKGMHNFRSSGEYDNDCTTPLTPL
CTQPEQVIKGGASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKGEDLGKVEFDEEIKK
RFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSAKDAGFSSSDGSDPKLNLGGLLLQA
LLEFWPRTRINPMDEEENEVNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLL
CRDSGGETESMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASD
MLQVRKVMEHVYEKIINLDNESQTTSSSANDKPGEQEKEEDMAMLAEEKIELMCQDQVLD
PNMDLRTVKHFIWKSGGDLTLHYRQKST
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggccacgcatcacaggcaaaatgctgctgggcggaggaaagtacaggtttcctacgtg
attagagacgaggtggagaagtacaatcgcaatggagtgaatgctctccagttagaccct
gctctgaaccggctcttcaccgcagggagagactccatcatccggatatggagcgtctac
caacaaaaacaggacccatatattgcatctatggagcaccacactgactgggttaatgat
atagttctttgctgcaatggaaaaacattgatatcagcttcatcagatactacsgtgaaa
gtatggaatgctcataaaggattttgtatgtcgacgttacggacgcacaaggactacgta
aaagctttagcgtacgctaaggacaaggagctagtggcgtcggctggactggaccggcag
atcttcctttgggatgtgaacacactgacagcgctcaccgcttccaacaacacggtcacc
aatttgaaattattcccacattttctccccgtggtgatcctaaatcaacatctcagccgg
ccaaccttgatgtctttctctgttgttcagatggagctggacagatctgctgacccacct
ccagcgatctgggtttccaccaccaagtcatctgtgaataaatggtcgctaaagggaatg
cacaacttcagatcatcaggggagtacgacaacgactgcaccacccctctgactccgctg
tgtactcagccagaacaagttattaagggaggtgccagtattatacagtgccacattctg
aatgacaagagacacatactcaccaaagacaccaacaacaacgtggcatactgggatgtg
ctgaaggcttgcaaaggagaagacttgggcaaagtggaatttgatgaggagattaaaaag
cggttcaagatggtgtacgtgccaaactggttctctgtcgatctgaaaactggaatgctc
acaattactctggatgagagtgattgctttgctgcttgggtgtctgcaaaggatgctggg
ttttcaagttctgatggatctgatccaaagttgaacttgggtggcttgttgctccaagct
ctgctggagttctggcccagaacgcgcatcaaccccatggacgaggaagaaaacgaggtg
aaccacgtgaacggtgagcaggagaacagggtgcagaaaggaaacggatatttccaggtc
ccgcctcacacrcctgtcatctttggagaagcaggaggaagaactctctttaggctgcta
tgtagagattcaggcggcgagactgaatccatgctgctgaatgagacagtcccacagtgg
gtcattgatataactgtagataaaaatatgcccaaattcaacaaaatccctttctacctc
cagccccattcttcttctggtgcaaaaactctaaaaaaggaccgtctctcggccagtgat
atgctccaggtgaggaaggtgatggagcacgtttacgagaagatcataaacctggacaac
gagtcgcagaccaccagctcctcggccaacgataaacccggagagcaggagaaggaagaa
gacatggcgatgctcgctgaggagaagattgagctaatgtgtcaagaccaggttctagac
cccaacatggacctgcggacagttaaacattttatctggaagagtggaggggacttgaca
cttcactataggcagaagtcgacatga

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