Poecilia reticulata (guppy): 103479324
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Entry
103479324 CDS
T05149
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04145
Phagosome
pret04814
Motor proteins
pret05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103479324
09142 Cell motility
04814 Motor proteins
103479324
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103479324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pret03036
]
103479324
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pret04812
]
103479324
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
103479324
Cytoskeleton proteins [BR:
pret04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
103479324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Dynein_IC2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Nbas_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
103479324
NCBI-ProteinID:
XP_008431912
LinkDB
All DBs
Position
LG17:complement(11301511..11309980)
Genome browser
AA seq
648 aa
AA seq
DB search
MSDKSELKAELERKKQRIAQIREEKKRKEEEKKKKDGESKRGAEGGPAGGEDSDLERKRR
EAEALLQSVGITPDVPHAQPLRVVTEDTCLFHYLVPAPMSPSNKSVGSDAGSQDSGDGNA
GPRTLHWDPDPSTLQLHSDSELMGRGTVRLGMSKLIQVDFVPKEMVSYSKETQTPTEASA
HTDQKADEEEDEEISAPPLTEDSQDEKNEQSEQQEEDTPKELTEEEKLQVLHSDEFLSFF
ERGSRIVERALAEQVDVCFDYSGKDLEDKEGDLQAGAKLVQNRQFADERWTKNRVVTCLD
WSPQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKATPEYIFHCQSEVMSAGFAKFHPN
LVVGGTYSGQIVLWDNRSNKRTPVQRTPLSASAHTHPVYCVNVVGTQNAHNLISISTDGK
MCSWSLDMLSQPQDSLELVFKQSKAVAVTSMAFPLGDVNNFVVGSEDGSVYTACRHGSKA
GITEVFEGHHGPVTGLSCHSAAGPVDFSHLFISSSFDWTVKLWSTKSTRPLYSFEDSSDY
VYDSMWSPAHPALFACVDLSGRLDLWNLNNDTEVPTASVCVEGSSALNRVRWSHSGKEIA
TGDSDGQVQVYDVGEQICVPKADEWTRFVRTLAEINENRDEAEELANV
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagagcgagctgaaggctgagctggagaggaagaagcaacggatcgcccag
atccgcgaggaaaagaagaggaaagaagaggagaaaaaaaagaaggatggagaatccaaa
cgtggcgcggagggagggccggctggcggcgaagactcggatctggagaggaagaggaga
gaagccgaggcccttctccagagcgttggcatcacccccgacgtcccgcacgctcagccc
ctgagggtagtaacagaagatacgtgtctgtttcactacctagtccccgcccccatgtct
ccctccaacaaatcagtgggcagcgatgctggaagccaagattccggggatggaaacgca
ggaccaaggactttgcattgggatcctgacccctccactctgcaactccactccgactct
gagctgatgggacgtggaacggtgagacttgggatgtccaaactcatccaggtggatttt
gtcccgaaggaaatggtgtcctactccaaggagacgcagacgcccacagaggcgtcggct
cacacggatcagaaagcggacgaagaggaggatgaggagataagcgctcccccgctgaca
gaggactcccaggatgagaaaaatgagcagagcgaacagcaggaggaagacacccctaag
gagctgacagaggaagagaagctgcaggtccttcactctgatgagttcttgtcgtttttc
gagcgtggcagccggatcgtggagcgagctctggccgagcaggtggacgtctgcttcgac
tacagcgggaaggatctggaggataaggaaggcgacttgcaggcaggagcaaaactagtt
cagaacagacagtttgcagatgagcgctggaccaagaaccgagtggtgacctgcctcgac
tggtctcctcagtacccagagttgctggttgcctcgtataacaacaacgaagacgctccg
cacgagccggacggcgtggctctagtctggaacatgaagtacaagaaggccacgccggag
tacatcttccactgccagtctgaggtgatgtcggctggcttcgcaaagtttcaccctaac
ctggtggtgggcgggacttattccggacagatagtcctgtgggacaacaggagcaacaaa
cgcactcctgttcagagaactcccctgtcggcgtcagcgcacacgcacccggtctactgc
gtgaacgtcgtcggaacccagaacgctcacaacctgatcagcatttccaccgacggcaag
atgtgctcctggagtctggacatgctctcccagccgcaggacagcctggagctggtgttc
aaacagagcaaggcggtggccgtgacgtccatggcgtttcctctgggggatgtgaataac
tttgtggtgggcagtgaggacggctcggtctacaccgcctgtcgtcacggcagtaaggcg
ggcatcacagaggtgtttgaaggccaccacggtcctgtgactggactgagctgccacagt
gctgcaggacctgttgatttctctcacctcttcatctcctcctcttttgactggactgtc
aaactgtggagcacaaagagcacccgtcctctgtactcgttcgaggacagctccgactat
gtctacgactcgatgtggtctccggcgcatcccgctctgttcgcctgtgtggacctgtcc
ggacggctggatctgtggaacctcaacaacgataccgaagttccaactgcgagtgtgtgt
gtggaagggtcttcggccctgaaccgcgtgagatggtctcactctggaaaggagatcgcc
accggagactcagacggacaggtgcaggtgtacgacgtaggggagcaaatctgcgttccc
aaagccgacgagtggacacgtttcgtcaggactctggctgagatcaacgaaaacagagac
gaggctgaggagctggctaacgtctga
DBGET
integrated database retrieval system
