Poecilia reticulata (guppy): 103479340
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Entry
103479340 CDS
T05149
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pret03036
]
103479340 (chd7)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103479340 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
Chromo_MIT1
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
103479340
NCBI-ProteinID:
XP_008431931
LinkDB
All DBs
Position
LG17:complement(11894998..11990059)
Genome browser
AA seq
3248 aa
AA seq
DB search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NT seq
9747 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccagggatgttgagcctctttggtgacgatgcagggttgttctcggacgaa
ttggatagtttgggagactgcttccccccgcagtcagcggctggcccagccaacccactc
gccccgcccacaaacccgtctctgaaccacgagcaccagggaaccagggcttaccaccaa
gggatgcttcacggcaccggggccggaccggggcagtccaaactggggcagatgtatgag
cacagcccgtatacaggctacgatcaagcgggtgcccccggaggacggatgatggcccag
aacggtcccagccagggctcgccgaatgtgaacacggccatgaacggcatgacctcccac
taccacaacaacccagctaactctagcaacactcaccacgggtaccagggcgatgctggg
gcagcaggaggaggcgggggcggagtttggggcccacagcagcagagcagatctgtgtat
cagcaagcttcagcaccatcaggggctggtcccaaccagatgggaagctaccaaatgtct
caaggcaactacgctggcatgcagggtcctcctacatccggtgcagcgcgcatgaatcaa
cactacccttcacagagcatggcccctgttccagctcaggacccatctcactacttagga
catgttgggatgggtggggtccagatragacagcctcagccacagccccagaactatccc
aacatgggccacgcacctcgatacccacactccccttctagacaacctccacaccagcac
caacagggcatggcaccgttcgggggtgctcagtaccctggctatcagccccagtatgct
gccatggggcctgggatgggccagggggctaatgctaacgtcagcgctaacaccagccag
gccatgggagcggggcagctgggccagaggttcaaccagggagtgagctcagcaccgggg
caacagggacaacgatacccctctgttccaccccaccagccgcactctgcctcaatgcag
cagcaggcagggcagcaaggccagcctatgcaccccctaaaccaccctccgaatcttccc
caacctccaaaccaaccccagtcccaccataccgccccagctcagggatcttacccctcc
ccgtcgtctatgtccccaatgcgggttctgggaaccccgactcctcctccccagcaagga
agaccccccagcgcaggactagccgggcctgcggatgtcgcaggatacacagcaatgcat
tctccgcccagcgctatggcccatgcacagagaactccccagacctctctatctgcagca
cacccacaacaccagcagccccacaacatgcctcccagtgcagggcaaatttatcctggc
atggggcctcagcgtggaccacaaatcgggccgactcggctccagcaaccacaagggcct
catgaagcctcagtcagccaggggggggaccagcgcctgctccaggcccaacagcaggcc
tctcgaggtgggcagcccatgccgtctgctcctatggggttccagggtccgcctattggt
caacacggagcgcctgcccctaaccagggcttagctccacctgcccagaacactcagacg
cagcacacgcatctgcccccacacccccaccacctgcaaagcacgccccctcctcccagc
caggcctcccacccatgggcacctcagccatctgccccccacccactctcctcaccccct
cttaccccacagaaagtgcctcacatacagcattccccctcagacctgtcaggtgatgcc
tcaatgatggttaccgacaggccggcggttggtgccggagcccccaaccagcctatcagc
acagagaagcctactgatcaggagaccaagccaaaaaagaagaagaaaaagaaagctaaa
gcagtggaagaaaaagaagatggaggcaagaaagaagcaagggaaggaggagatgaagac
gtaaagtctgagtttcctgcagcaggaagcaatgcaagtgaacagcttattggcacagga
gctgttgaagggagtttgccgccaccggaggagaagaagaagcggaaaaagaaaccaaag
gagaagacggagggcaaggagcccaaagagcccaagaccccgaagacccccaaaacaccc
aagactcccaaagagcccaaggagcccaaggagaagaaagccaagaccaccacacccaag
gccaagactcccaagaaaaccagcagtaaaaaggtggaatcagagggcggggccagcgct
gctaagaaggacgccaagaggaagagagagttgtcagtcggtgacgatgtggaggtgaag
tctccactaccctctcctcctgaagaggaggatgatgatggtgtgcagaagcgccgttcg
agtcggcaggtraagaggaagaggtacacggaggacctggagttcaggatctctgaggac
gatgacagcggagacgattcaccaacaccaaaatctccctcgtcctcctcacaacaacag
gatctgactgaggctgaagggcctgttgtggagaagatcatgggtatgcgcagcgccaag
aagcaactggagtcaggcgaggaagtggaggtggaggagttctacgtcaagttcaagggc
ttttcgtacctgcactgtcgctggtcggagctggaggagctggagaaggacaagagaatc
caccagaagataaagaggtttagagccaagcagcaactcaacaacttcatcactgagatg
gacgatgagcctttcaacccggactatgtggaggtggaccgagtcctggatgtttcagag
agcacagatgaaaatggagagattgtcaccttatatttggtaaaatggtgcagtttgcct
tatgaagacgccacctgggagctgaaggcagacatcgaccagtctaagatagatgaatac
gaacgcatcgcagcgcgcgaacccaacactaaccgagtggatcggccttctgcagccgac
tggaagaagctggagagctccagagagtacaggaatggcaacgcactcagggaataccag
ctcgaaggcctcaactggctgactttcaactggtacaactcacgtaactgtatcctggca
gacgagatgggccttgggaagaccatccagtccattacattcctctatgagatatacatg
aagagcatcgaggggccattcctgatcatcgcccctctctccaccatccctaactgggag
agagagttcaggacctggacggagctcaatgtggtggtctaccatggcagccaggccagc
cggaaaaccatccaggcttatgagatgtactacagagacacacagggtaagatagtaaaa
ggcgtgtatcgcttccatgctgtcatcacaaccttcgagatgatcctcgccgactgtccg
gagctacgcagcatcccgtggcgctgtgtggtgatcgacgaagcccaccgcctcaaaaac
cgcaactgcaagctgctggaggggctcaagatgatggatatggagcacaaagtcttgttg
acaggaactcctcttcagaacacagtggaggagctcttcagcttactcaacttcctggaa
ccagagagattcccgtctgaacagactttcatgactgaatttggagacttgaagactgaa
gaacaggtccaaaaacttcaaggcattctgaagcccatgatgcttagaagactgaaggag
gatgtggagaagaacctggcccccaaagaagaaaccattatagaggtggagttgaccaac
atccagaagaaatactatcgggccattctggagaaaaacttctccttcctgtccaaagga
ggcgcgggaggaagtggatcagctagtgtgcccaacctcctcaacaccatgatggagctg
aggaaatgctgcaaccacccctacctcataaatggagcggaggagaagatcatcgaggag
ttcagggattcccacggcggcaggattgatgtgcctgaaatggccctccaagctatgatc
cagggggccgggaagctggtgctcatcgacaagctgctgcccaaactgaaagccggagga
cacagggtgttgattttcagtcagatggtccgctgcctggacattctggaggactacctc
atccagagacgctatccatatgaacgaatagacggccgcgttcgggggaacctgcgacag
gcggccatcgacaggttttccagaccagactcggaccgattcgtcttcctgctctgcacc
agagccggtgggcttggcatcaacttaaccgcagcggatacatgcatcatcttcgactct
gactggaaccctcagaatgaccttcaggctcaggcgagatgtcatcgtatcggccagtcc
aagtcggtgaagatctaccgcctgatcaccaggaacagctacgagcgggagatgtttgac
aaggccagtctgaagctcgggctcgataaggccgtcctccagagcatgagcggccgagag
aactcaaacagcggggtccagcagttgtctaagaaagagattgaagacctactgagaaaa
ggcgcttatggcgctctgatggacgaagaagacgaaggctcgaaattctgcgaggaagac
attgaccagatcctccagagacgaacccacaccatcaccatcgagtcggagggcaaaggc
tccacgtttgcaaaggccagtttcgttgcaacaggaaaccgaacagacatttctctggag
gatccagacttctggcagaaatgggccaagaaagcagaactggacatggacgccatcaac
ggccggaacactctggtgatcgacacgcccagggtgaggaagcagacgcggcactacagc
agcgtgaaagaggacgagatgctcgarttctccgagctggagagcgacgacgacgaaccc
agtaagccgtcgtccaaacaacgacggcctcaagacaaaacgcagggatacccccggtcc
gaatgcttcagggtggagaagaacctgctggtctacggttggggcaggtggagcgacatc
ctcgctcacggccgcttcaagcgtcccctgaaggaggcggacgtggagacgatctgcagg
gctctcctggcctactgtctgctgcattaccgcggtgacgagaacatcaagagcttcatc
tgggacctgatcaccccgagcgaagacggcaccaccaggacgctgacgaatcactctggt
ctctctacccccgttcccaggggcaggaaggggaagaagggcaagatgaccactcctcct
cctcagacgccacgagctgattggctggccacctgcaaccctgaccatttgctgcaggaa
gacagctacaagaggcacctgaaacatcactgtaacaaggtcctgctgagagtccggatg
ttgtattatctgcgacaggaagtcatcggcgaccaggctgagcgcattctggaaggagcc
gactccagcgtgttggatatctggatccctcagccgttccatgctgaggtcccagctgac
tggtgggacacggaggctgacaagtccctgctcatcggcgtcttcaaacacggctatgag
aagtacaactccatgcgtgccgaccctgccctgtgyttcttggagcgagtgggcatgcca
gacgccaaagcgatcgccgctgaacagaggggctctgacatgatggcagatggcattgag
ggtgaggatgaggatccagagtataaaccgatacgtatgccattcaaagatgacctggac
gatttcaccaactctcccctggatgacaaagacgatgcagttgaaggcgagactgaagtc
aaatcaggtgagaacggccaaaacgtgccgtctgtgggcggagcttctggctccagcgag
cgactgtattggccagcggcctcggccctgacggccaggcttcgccgcctgatcacggcc
taccagcgctccaaccgcagagagcagctccgtcaggaggcactcaacagacccgacggt
cgccgacgacgacgcagggagttcctgccttccatccctatggttcctgaaacgggaggc
gccaccacgtacatccaggatggcacgggggtgttcatgacagaaggaagcccatatttg
gctaaaggaagcgcttattttgccaaaggtggtcagtttctgccagagacttcaccagtg
atgacggccaactccctgatgtctgatggatccctgtactatagagaraggagacaaaga
tggacgcgtcgtgaggaggcagacttctaccgcgttgtgtccacctttggagtcgtgttt
gatacgcagcgtcaaaagtttgattgggcccagttcagagcgtttgctcggctggacaag
aaaacagatgagagcttggagaaatattactactcgttcattgccatgtgcaaacgggtc
tgcaggatgcaggtcaagaccgagacaggtaaaagaaacaagctgctggataacatctgc
gaggctgtcctgaagggcaagtggcccgtcaacagacggcatgtcttcgacttccctggc
aacctcttgccgggtcacggctccgcggcaactgcggctgccgtagccatggtgagcgag
agcccgctgcagagacggagcctggccgagctgacgatagccggcatccacacgccgtac
agcgggagcgaagacaagacgctgtctccgcaggttcatgacgacgcgctgagcctgacg
gtgcctcgacagaggaggaggagaaggaaaaagatcgagatcgaggcagagagagcggcg
aagaggcgaaacctgatggagatggtggctcagctragggaaagccacgccgccgcagag
tctcagaaccaggccatcgacctcactaaggtgctcacaggaaggcgtgcaccaccacca
caagtcttctccgtcattggccggcttccccagtgccttgatgacaaacccttccctcaa
ggcccagatggatctgcttcagcaagtcccaccttccggacacagagccaacggttcgtt
ggacgccgacctgcccatcacgaagaggaggcggggccgcaggaaaaatgtggagggcct
gnccgcatcgagctgctgcgccgcatccgagagcaggtcctccctcacccactgctgtcc
gagcgcctcaagctctgccagccgtctccggacctgcccgagtggtgggagtgcgggcgc
cacgaccgtgacctcctcctgggggcttcgaagcacggcgtcagccgtacggattatcay
atcctcaacgatcccaccttgggcttcctggaggcccaccagcgcttcaccactcagcga
ggctccggtggcatcggctctcttggagaactcggcaaagtcggaatggggatcgcagaa
gckgcctctgcgccccttctcacggctgcagagctggagagtgcygctgccgctgccaaa
atggccgtggacgcagctaaagaggaggaagaagggaaggctgtaaagatggaagaagag
aaaacagaagtggaggtaaaaatggaaacggaggaggaagattccagcaacattccatgt
atgaagactgaaccccttgagcaaaagggaaaccaggatgatgctgatgaagggaaagag
gaggcagccgcttcacccatgaaggtcaaagctgaagacgttttgccaaaagttgagaaa
gacgacgaagcgaaaccagaaagtcagaggacaaatgaccaagattacaacatgacagaa
gagaagagcatcgcaagccctgaatatcaccttggcaacgagaaagacgttggtgctgag
ctcccagagttctctgctgaagcacaacttggccccaagactgcagaggaggaagactgc
gaggagaaggagacttccgagtgtcttaaatctccaaagtctgccgaaaccgagaaaagc
ccagaggaagaggaggaggagaggctggatgaagatgacaaatcggagaagtcctctcag
gctgaagcgagcgcagggcagaagaacttcgacgaggagagcatcgcttctctgagcgcg
tccgtacgggacgagacccgagacgagttctgtcccgatgacctgcaggaaacgtctgtg
ctgcacaccctgcaggaccgctcctacgctttctctttctggcctaagggagtggaggcg
gtccaggaagcgccccagtctcacagaccgatcagcgtccccgagcagagccccaatgcc
cgctctctggcctcgggcagcctggaggaggaggagacgcccgtctccagcaaagacctg
ggagagtggctgagacagcatcccacctacaccatggacatgactggattcacaccaaag
agcgaggaattgctgttatctcagttctccaagcccaagcagaagcgccatcgctgtcga
aaccccaacaagatcgacatcaacacgctgaccggggacgagagagtccctgtggtcaac
agacggaacggacgcaagatgggtggggccatggctccaccaatgaaggagctccccagg
tggttattggagaacccggagttctccatcgctcctgattggacagacatcgtcaagcag
tcgggtttcctcccggaagccatgtttgaccgccttttgaccggccctgttgtcagagag
gaaggcgtccgtcgtcgagggcggcgacccaaatcggagatagtgaaggcagccgccgcc
gcccaggccgcagcggcagcgcaggctgcgcaggcatcgctggcgtcagccgcttcctcc
gcaggaggaatcaacccgctgctgctcagcagcctgttcggagggatggacctgtcgtcc
ctccagagccttcagtcgctccagttggctgctggtctgatggccttcccgccgccagct
gaccccaaacagtccgccgccaacgccgccgccgcctccatgctgccactcatgattccc
ggcatgggagggctgcccaacatggccgccgccattcccaacatgttcagccttggagga
ctatttggaggcaacctggcggccgccgctgctgccaccgccgcttccaacgccaatgcc
gcttccggaaacaccaacgggacgccggagggagacggaggcaacagggaggagacggca
aagagggagaaggaggcragagaccacggagatgagatgggagaggatgatgacgacgaa
gaagaggaggcggcagaggaagaggaggagggagcgaaaaagaccaagaagaggaagatg
gagggagaagttgcttcagaaaaaccagagaaaccygtcagcaacatgtctggtgccccc
aagatggtgaccgccgaggctccagcagaggtttccatcaacggcgacacagccgccctg
ctggccgccgccggcatgtcagccaactccctggcgttcaaccctttcctgctgtccacc
atggcgcccagcctcctctacccctccatgttcctcccgccgggcctggccggcctcagc
ctgtccggcttccccaccgcctccctcgccgagctgcagagcgccatggccggggcgctg
ggcgacagcgccgccaccccaaacccgccgagagacggcgagggggacaagagggacgac
gggaaggctgatgaagacgaagaggaagaggaggaggtagaggagacggactctgcggag
cagaaaggggaaggagcgatgggcggaggattgccggaggaggcggcggttgctgcggcg
tctccccagaacggaacaagtgactga
DBGET
integrated database retrieval system
