Poecilia reticulata (guppy): 103479360
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Entry
103479360 CDS
T05149
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103479360 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pret03041
]
103479360 (prpf38b)
Spliceosome [BR:
pret03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
103479360 (prpf38b)
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Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
103479360
NCBI-ProteinID:
XP_008431958
UniProt:
A0A3P9PN13
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Position
LG17:12925437..12931091
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AA seq
463 aa
AA seq
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MANVGNQLPTQAVSKPPSGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVTHIEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQVMGLITHTDSPYIRALGFMYIRYTQPPTDLLDWYNDFLDDEEELDVKAGGGCVMTIGE
MLRSFLTKLEWFSTLFPRIPVPVQKAIDQQMKARPRKVAPKEPEEEAEFTESGRQXERRR
SRTPRRTPSPKRSPKRSRSRSHHRERDRHGPSFDRELERERDRQRKERDGGRDRERDRAD
RGDRERRRSRSADRNKECKRSLSGSKERRGERREKERDGAEDRSRKKDRDHHKDRGTERD
RSRDRKSRAENDERRHKEDRDRHREDRKAKRSSRSRSRERRHKGGAEEKGRKRDRSHSRE
RERERDGERSHKRSRSKERSRHQRESSNEHSKHGERRRSQSTE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgtcggaaaccaactaccaacgcaggccgttagcaagcctccatcaggaaaa
catggcaacgtattgcccctatggggaaacgaaaagactatgaacctaaatccaatgatt
cttacgaatgtgctctcctcgccgtatttcaaagttcagctgtatgaactaaagacctac
catgaagttgtggacgaaatctatttcaaggtgactcacattgagccctgggaaaaggga
agcagaaagactgcgggccagactggaatgtgcggaggggtgcgtggagttggcactggt
ggcattgtatcaactgctttctgtcttctttacaaactgtttactctcaagctaacgcgc
aaacaggtgatgggtctcatcactcacacagactctccgtacatcagggcacttggattc
atgtacataagatacactcagcctccaacagatttattagactggtataatgacttcctg
gatgatgaggaggagcttgacgtaaaagcaggtggcggctgtgtcatgaccattggggag
atgytgcgttccttcctgaccaagctggaatggttctccacgctgtttcccagaatccct
gtgcccgttcaaaaggcgattgatcagcagatgaaggcgaggccgcgtaaggtggcccca
aaggagccggaggaggaggccgagttcacagagtcgggaaggcaascagaacgacgacgc
tccaggacgccgagacggacaccragtcccaaaaggtctcccaagcgatcgagaagcagg
agccaccaccgggagagagaccggcacgggccragcttcgaccgggagctggagagggag
cgggaccggcagaggaaggagagggacggggggcgggacagagagcgggacagggcagac
agaggagacagggaaagacggagatcacgtagcgcagacaggaacaaagagtgcaaaaga
agtctcagcggcagcaaagagcggagaggcgaacgcagggagaaagagagggacggggca
gaagacaggagcaggaagaaagacagggatcaccacaaggacagagggacggagagggac
aggtccagagacaggaagagcagggcggagaacgacgagcggaggcataaagaagacagg
gacagacacagggaggacagaaaggccaaacgatcgagtcggagcagaagcagagaaagg
aggcataaaggcggagcggaggagaagggcaggaagagggatcgcagccacagcagagag
agggagcgcgagcgggacggggagcgctcccacaaacgcagccgcagcaaagagaggagt
cgccaccagcgggagtccagtaacgagcacagcaaacacggtgaacggaggagaagtcag
agtacggaataa
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