KEGG   Poecilia reticulata (guppy): 103479360
Entry
103479360         CDS       T05149                                 
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pret00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103479360 (prpf38b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pret03041]
    103479360 (prpf38b)
Spliceosome [BR:pret03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    103479360 (prpf38b)
SSDB
Motif
Pfam: PRP38
Other DBs
NCBI-GeneID: 103479360
NCBI-ProteinID: XP_008431958
UniProt: A0A3P9PN13
LinkDB
Position
LG17:12925437..12931091
AA seq 463 aa
MANVGNQLPTQAVSKPPSGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVTHIEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQVMGLITHTDSPYIRALGFMYIRYTQPPTDLLDWYNDFLDDEEELDVKAGGGCVMTIGE
MLRSFLTKLEWFSTLFPRIPVPVQKAIDQQMKARPRKVAPKEPEEEAEFTESGRQXERRR
SRTPRRTPSPKRSPKRSRSRSHHRERDRHGPSFDRELERERDRQRKERDGGRDRERDRAD
RGDRERRRSRSADRNKECKRSLSGSKERRGERREKERDGAEDRSRKKDRDHHKDRGTERD
RSRDRKSRAENDERRHKEDRDRHREDRKAKRSSRSRSRERRHKGGAEEKGRKRDRSHSRE
RERERDGERSHKRSRSKERSRHQRESSNEHSKHGERRRSQSTE
NT seq 1392 nt   +upstreamnt  +downstreamnt
atggctaacgtcggaaaccaactaccaacgcaggccgttagcaagcctccatcaggaaaa
catggcaacgtattgcccctatggggaaacgaaaagactatgaacctaaatccaatgatt
cttacgaatgtgctctcctcgccgtatttcaaagttcagctgtatgaactaaagacctac
catgaagttgtggacgaaatctatttcaaggtgactcacattgagccctgggaaaaggga
agcagaaagactgcgggccagactggaatgtgcggaggggtgcgtggagttggcactggt
ggcattgtatcaactgctttctgtcttctttacaaactgtttactctcaagctaacgcgc
aaacaggtgatgggtctcatcactcacacagactctccgtacatcagggcacttggattc
atgtacataagatacactcagcctccaacagatttattagactggtataatgacttcctg
gatgatgaggaggagcttgacgtaaaagcaggtggcggctgtgtcatgaccattggggag
atgytgcgttccttcctgaccaagctggaatggttctccacgctgtttcccagaatccct
gtgcccgttcaaaaggcgattgatcagcagatgaaggcgaggccgcgtaaggtggcccca
aaggagccggaggaggaggccgagttcacagagtcgggaaggcaascagaacgacgacgc
tccaggacgccgagacggacaccragtcccaaaaggtctcccaagcgatcgagaagcagg
agccaccaccgggagagagaccggcacgggccragcttcgaccgggagctggagagggag
cgggaccggcagaggaaggagagggacggggggcgggacagagagcgggacagggcagac
agaggagacagggaaagacggagatcacgtagcgcagacaggaacaaagagtgcaaaaga
agtctcagcggcagcaaagagcggagaggcgaacgcagggagaaagagagggacggggca
gaagacaggagcaggaagaaagacagggatcaccacaaggacagagggacggagagggac
aggtccagagacaggaagagcagggcggagaacgacgagcggaggcataaagaagacagg
gacagacacagggaggacagaaaggccaaacgatcgagtcggagcagaagcagagaaagg
aggcataaaggcggagcggaggagaagggcaggaagagggatcgcagccacagcagagag
agggagcgcgagcgggacggggagcgctcccacaaacgcagccgcagcaaagagaggagt
cgccaccagcgggagtccagtaacgagcacagcaaacacggtgaacggaggagaagtcag
agtacggaataa

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