Poecilia reticulata (guppy): 103479618
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Entry
103479618 CDS
T05149
Symbol
tnn
Name
(RefSeq) tenascin-N isoform X1
KO
K06252
tenascin
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04510
Focal adhesion
pret04512
ECM-receptor interaction
pret04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103479618 (tnn)
04518 Integrin signaling
103479618 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103479618 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pret00536
]
103479618 (tnn)
Glycosaminoglycan binding proteins [BR:
pret00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103479618 (tnn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Teneurin
EGF_TEN
Fn3_PBP1
FN3_DSCAM-DSCAML_C
EGF_2
Fn3_Dep-1_3rd
DUF4998
Arylsulfotran_N
EGF_Tenascin
DUF7949
DUF4249
DUF460
DUF5435
Motif
Other DBs
NCBI-GeneID:
103479618
NCBI-ProteinID:
XP_081454075
LinkDB
All DBs
Position
17:14996669..15052855
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AA seq
1120 aa
AA seq
DB search
MSAGLLWRALCLLIILCTVSHHVRCTDNQPDSSGTEQGLTFSHIYKLDIPGSSGCTVEHL
PTHKTGLQQDTVTNGENDIIFKHNIRLQTPKCDCEESESFKDLLYRINGLEEEVTYLKTQ
CTQGCCGRGGVAGVDTSCSGHGTYQQDTCSCLCNPGWESPDCSVSSCPDECNDNGRCVDG
KCVCYEGYTGEDCSQLACPGDCNDKGQCRDGKCVCFPHFTGEDCSTPTCPNDCGGNGQCV
DGQCVCEEGFYGEDCSLVLTPQGLRLVQVTDVSLLVEWESVQGAEYYMLTYHPKFDKGAM
EEVRISNSENSYRITGLTPGVTYVVQVYAVIKKIQSEADMIEATTDVSTVDDMQVIGQTE
VSIQVDWKNPQAEVDYFRLTHTDPSGQEEELNVQRSQEARTKYTIVGLYPGTEYQISVQP
IKGNTKGKASFATGVTDIDAPTNFVTTEVTEDTATVSWDKAQAEIQGYMLSYTSAEGSSS
DIFVGRGSTSYRLVGLRPGVVHTVYIWAFKGDKVSGKSSTEAETELDAPTNLSVEDETDS
SFRVYWDPTEAQIDGYMLAYSSSDGSREETPVGSDSSYALTGLRPGVFYTVYVWAVRGSK
ASRKTSTQAETELDAPANLVAHDETESSFSLSWDPVQAEIDGYILTYTSIDGSSKEIPLG
PNSTSYLLTGLRPAVLYTVYIKASRGDKTSRTISTQAETELDAPANLIATDETESSFNLS
WDPVQAEIDGYILTYTFHDGSSKEILVGPDSASYVLTGLRPAFIYTVYIKAVRGDKASRT
ISTQAETEIDSPKDLKASDVTQDSASLTWVPPLADIDGYILTYRDEEGKLQTIENRLDSR
KRRFAASKLERGKRYIVTIYAFRGSKRSKVVETFFKTVALLYPFPMDCGQIMKNGNKNNG
VYTVYINNNQSKPIQVYCDMTTDEGGWLVLQRRNTGNLDFMRRWRQYIAGFGNLTEEFWI
GLDKIHELTNTPTQYEIRFDLGLGSDRAYAIYDNFKIAPVRQRFKLTIGKYRGTAGDAMT
YHQGRPWTTIDSDNDLALTNCARTHKGAWWYANCHLANLNGKWGDNAHSVGVNWEPWKGH
LTSLDFTEMKIRPVGALSSRKRRSLMAREGKSRVSSADNK
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctggactcctgtggagggccctgtgcctgctgattatactttgcactgtgtca
caccatgtgcgctgtacagacaaccagccagattcctctggcacagagcagggactcacc
ttcagccacatctataagcttgacatcccaggaagctctggttgcaccgtggagcatctg
ccaacacacaagacaggtctgcagcaagataccgtaaccaatggagaaaatgacatcatc
tttaaacataacattaggctgcaaacacccaagtgtgattgtgaggaatcagaaagcttc
aaagacctactgtacagaatcaatggactggaagaagaagtcacctacctaaagacccag
tgcactcaaggatgctgtggaagaggaggtgttgcaggtgtagacacaagctgcagtggt
catggtacctaccagcaagacacctgcagctgcctttgtaacccaggatgggaaagccct
gactgctccgtgtcctcctgccccgatgagtgcaacgacaatggccgatgtgtagatggg
aaatgcgtatgctatgagggttacacaggagaagactgcagccagctggcatgtccaggc
gactgcaatgataaggggcagtgcagagatggaaaatgtgtgtgtttccctcattttacc
ggtgaagactgcagtaccccgacgtgtcctaatgactgcggtggcaatgggcagtgtgtg
gatggtcaatgtgtctgtgaagaaggcttctatggagaggattgttctttagtcctcaca
cctcagggtctgaggttggtccaagtgacggatgtttctctcctggtggagtgggagtct
gtccaaggggcagagtattacatgctgacctatcatcctaaatttgataagggtgccatg
gaggaggttcggatttccaactcagagaattcctaccgcattacgggactcacacctggt
gttacctacgttgtccaagtctacgctgtcatcaaaaagattcagagtgaagcagatatg
attgaagccaccacggatgtctcaactgttgatgatatgcaagtcattggccagacagag
gtttccatccaagtggactggaagaacccacaggcagaagtggattacttcagactgaca
catactgacccatcaggacaggaggaggagctgaacgttcagaggagtcaagaagcacgc
accaagtacactattgtgggtctatatcccggaacagagtatcaaatttctgtgcagccc
atcaaagggaacaccaaaggaaaagcttctttcgcaaccggtgtcacagacatcgatgca
ccaacaaactttgtcactactgaagtaactgaagacaccgcaaccgtctcctgggataaa
gcccaggcggaaatccaaggctacatgttgagctacacgtctgctgaaggctccagctcg
gacatctttgtagggcgtggcagcacctcctacaggctggttggtctgaggcctggggtc
gtccacacggtctacatctgggccttcaagggagacaaagtcagtgggaagagttcaact
gaagccgaaacagagttggatgctcctactaacctttcagtcgaagatgagacagactcc
agcttcagagtttactgggatcccaccgaggcacaaattgatggctacatgctcgcctat
agctcctctgatgggtcgagggaggaaaccccagttggatctgatagctcttatgcgctc
actggccttaggccaggggtcttctacactgtctatgtctgggctgtcaggggaagcaaa
gccagcaggaagacctcaacacaagctgagacagagctggacgccccagcgaacctcgta
gctcacgatgaaaccgagtccagcttcagcctttcctgggatccagtccaggcagaaatt
gatggctacatcctaacctacacctccattgatggatctagtaaagaaatccctttgggc
cccaacagcacctcttatttgctgactggtttaaggcctgcagtcctctacactgtctac
atcaaagcctcaaggggagacaaaaccagcaggacaatatccacacaagctgagacagaa
ctggatgctccagctaacctcatagccacagacgaaaccgagtccagcttcaacctttct
tgggatccagtccaagcagaaatagatggctatatccttacctacaccttccacgatggc
tctagtaaagagatccttgtggggcctgatagcgcctcttatgtgctgacgggtttacgg
cctgcgttcatctacactgtctacatcaaagctgtgaggggagacaaagccagcaggaca
atatccacacaagctgaaacagaaatcgactcccctaaggacctaaaggcttcagatgtg
acgcaggattcagcttccttgacttgggttcctcctctggccgacattgatggctatatc
ctcacctatagagacgaagaaggaaaattacagactattgaaaataggctagattccagg
aagagacgctttgctgcatccaagctggagaggggaaagaggtacattgtcaccatttac
gcctttaggggcagcaaaaggagtaaggtggtggagactttcttcaaaacagttgctctg
ctgtaccccttccctatggactgtggacaaataatgaagaacggcaataaaaacaatggc
gtctatactgtctacattaataataaccaatccaagccaatacaggtttactgtgacatg
accaccgacgaaggcggttggctggtacttcagcggcgtaacactgggaatctggacttc
atgagacgctggaggcagtacatagcaggctttggcaacctgacagaggagttctggatt
ggtttggataagatacacgagctaaccaacactcccacgcagtacgagatcaggttcgac
ttgggcctgggctcagatagagcgtacgccatttacgacaactttaagatcgctccggtc
agacagagattcaagctcaccattggcaaatacagagggacagcaggtgacgccatgacc
taccaccaaggccggccctggaccaccatagactcggataatgatcttgcgttaactaac
tgtgccaggacccacaaaggagcttggtggtatgcaaactgtcacttggccaaccttaat
ggtaaatggggagacaacgcacacagtgtgggagtcaactgggagccatggaaaggacat
ctaacatccctggacttcacagagatgaagatccgacccgtgggagcgttgtccagcaga
aagaggcgatcgctgatggccagagagggaaaaagcagagtctcaagcgccgacaacaaa
tag
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