Poecilia reticulata (guppy): 103479648
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Entry
103479648 CDS
T05149
Symbol
tnr
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04510
Focal adhesion
pret04512
ECM-receptor interaction
pret04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103479648 (tnr)
04518 Integrin signaling
103479648 (tnr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103479648 (tnr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pret00536
]
103479648 (tnr)
Glycosaminoglycan binding proteins [BR:
pret00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103479648 (tnr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Fn3_PBP1
Pur_ac_phosph_N
EGF_Tenascin
EGF_2
FN3_Tor_3rd
Fn3_VIN3
Fn3_Dep-1_2nd
Interfer-bind
Fn3_ROS1
DUF4998
Fn3_R-PTP-O
DUF7949
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
103479648
NCBI-ProteinID:
XP_081453924
LinkDB
All DBs
Position
17:complement(15076655..15251810)
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AA seq
1380 aa
AA seq
DB search
MPESKQLHWTTELTTMLALALLFALQGAAHAAPSGDNKLVRTTRVRRQIPEGDQFPSASS
VNQTLREQPLVFNHVYNINVPMESLCSIDLDASVAPDSHAELGSRPPAEGPGEPAGPTEY
TEQTLDAESQVTFTHRINIPKAACSCPAITTIQQLATRVEMLEREVSMLRAQCGSGCCGE
GSAMGRLDFVPGCSGHGSFSFDLCGCICEEGWGGKNCSEPRCPNDCSGQGVCIEGECVCD
RDFGGDNCSEPRCPSDCSGRGLCIDGECVCEESFTGEDCMVGRCLNDCSDQGLCVNGTCQ
CRPGYVGEDCSLVYCANNCSKKGVCKEGFCVCQDGFAGDDCNSVAPAMNLNARGVTDRTI
ELEWEGSIMVTDFLVTYTPSSPGGVQLEVRLPGNTSSWIITGLEAGIEYNINVFAVINNS
ISVPSSITVWTYLSNPDGLVFKSITETSVEVQWQPFYYSFDGWEISFIPKDNDGGMTAQL
PSTITSFIQSGLRPGEEYTVNLVALREQGRSQPVTATFTTLIDGPTQLIVRDVSDTVAFV
EWTPPKAKIDQIVLRYGLVRGEGPRTTFRLQPTLTQYSLQVLRPGSRYEVSVSGVRKGNE
SGSISTEFTTALSFFSEIDAPKNLRLVSKTSTTLELEWDNSEAEVEGYQVVYSTLAGDQY
DKVIVPRNEGATTKTNLTDLLPGTEYGIGISAMKGINQSTPATMNARTGLDVPMDLTVTA
STDNSITLVWGVVQGPIDHYRVTYTSSSGITTELTVPKDITTTTLTDLDPGTEYTITVAA
RRGRQQSTAATIDAFTGIRPVTHLYLSEGTSDSVLVAWSAPAPPADLFILSYSSADGTDT
SKVTLEGSKTRSLVQGLLPSTHYTFSLITIQGDVTSEPLTASLRTEMDPPKELAVSDVTE
DSVTISWIKPLAPFEYYKLSYQSARGRVDSEMIDSDVTNYTLSSLFPATEYEISLNAVRG
SQESRPVTTSVFTAMDMPAELTALNITPQGALLRWNPPLSNVDNYVLTITHNQLTADTFL
VEGNKHEHQLSNLKPSTTYSVALYATKGPLTSGTVITNLQTPMDAPVNLTASEVNHRSGL
ISWQPPVAEIDNYMLTYKTPDGSRKELILDAEDTWIRLEGLAESAEYTVKLQAARGLDTS
AVVSTTFTTGSRLFSTPQNCAQHLLNGETVSGVYTIYINRDPSQGVQVYCDMTTDEGGWI
VFQRRQNGLTDFSRKWSDYRVGFGNLEDEFWLGLDNIQKIASQGRYELRIDMRDGQESVY
ANYDKFSIGDARNLYKLRIGEYNGTAGDSFSYHQGRPFSTKDRDNDIAVTNCALSYKGAW
WYKNCHRANLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPFNFRSISSKRRRSTSV
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgccagaatcaaagcaacttcattggaccacagagctcacaacaatgttggctcttgct
ctcctttttgcactacagggtgctgcacacgctgctccatcaggagacaacaagctggtt
cgaaccaccagagtgaggaggcagatcccagagggggatcagtttccctctgcttcctca
gtcaaccagacactacgagagcagcctcttgtctttaaccacgtgtacaacattaacgtg
ccgatggagtctctgtgctccatcgacctggatgcatctgtggccccagattctcacgct
gagttgggatccagacctccagctgagggtccaggggagccagcggggccaacagaatac
acggagcagacgcttgatgcagagagtcaggtgacgtttacacaccgcatcaacatacca
aaagcagcgtgcagttgtccagcgataaccacaatccagcaactggccaccagagtggag
atgctggagagagaggtgtccatgctcagagctcagtgtggatctggatgctgtggggaa
ggctctgccatgggtcgtctggactttgtcccaggttgcagcggccacgggagcttcagc
tttgatctgtgtggctgcatctgtgaggaaggctggggcggcaaaaactgctccgagcct
cgttgcccaaatgactgctccggtcagggggtgtgcatcgaaggggagtgtgtgtgtgat
cgggactttggaggcgacaactgttcagagccacgatgcccctccgactgctcaggcaga
ggcctgtgtatcgatggtgaatgcgtgtgcgaggagtccttcacaggcgaagactgcatg
gtcggacggtgtctcaacgactgctcagatcaggggttgtgtgtcaacgggacgtgccag
tgccgccccggctatgtgggagaagactgttcattggtctactgcgccaacaactgcagc
aagaagggagtctgcaaggagggtttctgtgtctgccaggatggctttgctggagatgat
tgtaactcagtggcacctgccatgaatttaaatgcacgtggagttacagatcgtactatc
gagctggagtgggaagggtccattatggtgacagatttcttggtgacctacactccaagc
agccctggaggtgtgcagctagaagtgaggctcccaggaaacacatcatcttggattatc
acaggtcttgaagccggcatagagtacaacatcaatgtgtttgctgtcatcaacaactca
atcagcgttccctccagtatcactgtgtggacgtatctttccaatccagatggattagtc
ttcaaatctatcacagagacatcagtggaagtccaatggcaaccgttttactattccttt
gatggatgggagatcagcttcatccccaaggacaatgatggcggcatgacagcccagctg
cccagcaccatcacctcatttattcagagcggtctgaggcctggggaggaatatacagtc
aacctggtggcgctcagagagcagggtcggagccagcccgtcactgctaccttcacaacc
ttgattgatggtccgactcagctgattgtgcgtgacgtgtcggacaccgtagcctttgtg
gagtggacaccaccgaaagcaaagatcgatcagattgtgttgcgttacggccttgtgaga
ggagagggcccgcggaccacctttagactccagcccacacttacccagtactcattacag
gttctgcgtcctggttcacggtacgaggtgtctgtaagcggagttaggaaaggaaatgaa
agtggctctatctctactgaatttacaaccgctttatcattcttctcagagatcgatgcc
cccaagaacttacggctcgtgtccaagacctccactaccctcgagcttgaatgggataac
agtgaggctgaggtggaggggtatcaggtggtgtacagcactttagcaggagatcagtat
gataaagtgattgtgccacgcaacgagggtgccaccactaagactaacctcacagacctt
ctgccagggacggagtacggcattggtatctctgccatgaagggtatcaaccagagtaca
ccagcaacgatgaatgccaggacaggcctggatgtacccatggatttaactgtgacagct
tctactgacaactccatcactctggtgtggggtgtagtccagggtccaattgaccactac
agggtcacctacacatcttcctctggtatcacaactgagctgacagttcctaaagacata
accaccacgactctgacagaccttgaccctggaactgaatatacaatcacagtagcagcg
agaagagggaggcagcagagcactgcagcaaccatcgatgcctttacagggatcaggcct
gtaacccacctttacctgtcagaagggacgtcagattcagtgttggtggcatggagtgcc
ccagcaccacccgctgacctcttcattctgagctacagctctgctgacgggacagacact
tctaaggtgactctagaaggctccaagacgaggtcactggtccagggcctgctgccgtcc
actcactacacgttcagtttaatcacaatacaaggggatgttacctctgagccccttaca
gcatccctcaggacagaaatggacccaccaaaggaactggcggtctcagatgtgacagag
gattcagtgaccatctcttggatcaaaccactggctccctttgaatattataagctctcc
taccagtcagccagaggtcgagtggacagcgagatgatcgacagcgatgtgacaaactac
accttgtctagtctgtttcctgccacagagtacgagatcagcctcaatgctgtcagaggg
agtcaagagagcagacctgtcaccacgtctgtcttcacagccatggacatgcctgcagaa
ttgacggccctcaacatcactccacaaggagccctgctgaggtggaaccctcccctgtcc
aatgtggacaactacgtgctgaccatcacacataaccagctgacagcagacactttcctg
gttgaaggaaacaagcatgagcaccagctgtccaacctcaagccaagcaccacctactca
gtggccctgtatgccaccaaaggacccctgacaagtggcactgtgatcaccaaccttcag
acacccatggatgcacctgtgaacctgacggccagtgaagtgaaccaccgcagcggtctc
atttcctggcagccgccagttgcagaaatagacaactacatgctcacttacaaaactcct
gatggcagccggaaagagctgattcttgatgcagaggacacatggattcgactggaggga
ttggcggagagcgcagagtacacggttaagctccaggctgctagagggcttgataccagt
gctgtggtttccaccacttttactacagggagccgtctgttttcaacacctcagaactgt
gcccaacacctgctgaacggggagactgtgagtggcgtctacaccatttacatcaacaga
gatccgagccaaggggtgcaggtgtactgtgacatgaccacagatgaaggaggctggatt
gtgtttcagcgtcgtcaaaatggtctgactgacttttccaggaagtggagtgattaccga
gttggatttggaaaccttgaggatgagttttggcttggtcttgataacatccagaagatt
gcttctcagggacgctatgagctgagaattgacatgagggatggacaggaatcagtttat
gccaattatgacaaattttccattggagatgcaagaaacctctacaagctcaggatagga
gaatataatggcactgctggtgactctttcagctaccaccagggccggccattctccact
aaagacagagacaatgacattgcggtcactaactgtgccttgtcatacaaaggagcctgg
tggtacaagaactgccaccgggccaacctcaatggaaaatatggcgagtccagacacagt
cagggtatcaactggtaccactggaaaggccacgagttttccattccctttgtggagatg
aagatgaggcccttcaactttcgcagcatcagcagtaagaggagacggtccacctctgta
taa
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