Poecilia reticulata (guppy): 103479691
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Entry
103479691 CDS
T05149
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103479691 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pret01009
]
103479691 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pret04131
]
103479691 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
pret03029
]
103479691 (rb1cc1)
Protein phosphatases and associated proteins [BR:
pret01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103479691 (rb1cc1)
Membrane trafficking [BR:
pret04131
]
Autophagy
Autophagosome formation proteins
ULK complex
103479691 (rb1cc1)
Mitochondrial biogenesis [BR:
pret03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103479691 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Lant_leader_dom
Motif
Other DBs
NCBI-GeneID:
103479691
NCBI-ProteinID:
XP_008432484
UniProt:
A0A3P9NRM3
LinkDB
All DBs
Position
LG17:21153218..21171088
Genome browser
AA seq
1616 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAVQHQVLVVNGGECMAADRRVC
SYSAGTETNPIFLFNKEMILSDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLEDCTLSYQKLLVKFNTAYTNYQH
DLEEIKIKLSKLGTSVSVMARIPLLECLTRHSYRESIEKSSSTPEKDSDETEEEKSTDSV
LCATQTQVASKSSASLSASGAGTCETEGDQETSEMTESGGLRAALLDDNTPELACQSSFN
VTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLADCRDTIAKLDNQNMKSIKGL
EDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLN
NHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELIERVRV
VDALSTVPQMYCLAVVEVVRRKMFMRHYREWANALVKDGKRLYEAEKFKRESFGKLFRKS
FLRNRLFRGLESWPPTSFCTRKPRKFDDELPDISLDDLQYLKSCCPVEVQPFLMIPAMCD
FEPLNRHVETLHKLVQAAQSVDEMSQTITDLLSEQRASCSQSAQRSTAQTPQSEGKPRTT
TPVPSKTPLCLSLQGSSCQPLLVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGS
LDLDSLAESPESDFMSAVNEFVIEENLTSPNPISDPISPEMMVESLYSSVINAIDSKRMQ
DTTTLEKENSRIADLKEVLEKYRCAAEESHSNLRSVKADLYYLRGFVLKEQQDFGLALRS
MTMEVRSTVNEIYQCHKTELNEQHEGELLTARQELEKQVQALTEENQVNQNIVRDVQRAM
LELEGLMERKEKELTQLENEKERWVEKERNFAEKIKHFEQINCDQTEEIKTLLTSKDSLS
SQLENLHFEIERSQQKIRQELEAVSQCHLKELEEKLKQEHQKALDSLNKNNKEALEHLAV
ENSTKLTKAADHHDTAIKEKDVQIKEMEDRLTELTELRCRLEVDLALKESETEEVRILFE
EAKMQQAEAVKTQVEADSKVLKDELMDLKRQLQAKNEEYEVDLAELRTLMRIEKDHCISE
LVDRHEEQTILLHGKISALQQHSQDAERNHAEQQQRLREELDQQRAALAEDKEKQFRSFQ
EREQQLRTVVNSVQAENDLLSKNLEQERRAAQEEEASSVVAANAFKELEQQKEETERRLL
EKIRQLENELHEKRSSKSDEGLSLHAEGRADAGAPLSLDSALQERLQQETASLQAQIELL
EKKKNEEIQNLKTSLIAEQQTNFNTVLTREKLKKEQIINDLSEKLQNVTQQQEKDKALIE
TLSEDRASVMQEKKQLEEELNRLRSSALVSSAFFPSNSAQELSEAGAAARALPVAGACSP
ETSAETDRLASVTAFRDDEHVDSAVEASMVASDDTVMSEEKQRIMLLERTLHMKEEENKR
LSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSESL
TALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNRKV
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtatgtgttccaggtcaacaatggaagcacgttgacttttgacaccgacctt
gctgtccaaactgtactagagcttaaacatgccatccaagccaaatacaaaatcgcagtt
cagcatcaggtcctcgttgtcaatgggggggaatgtatggctgcagacagacgggtctgc
agttacagtgctggcactgaaaccaaccccatattcctgttcaacaaagagatgatcttg
tccgaccgggatccaaccatcccaaaaaccaccttctccattgagagtgagattcaggtt
aaggtggaagagtcgctactgatgccagctgtctttcacaccgttgcctcacgaacacaa
cttgctctggaaatgttcgaagttgccaaaaaactttgctcgttctgcgaacgtttggtt
cacgatgagcatctccaacatcaaggctgggcagctatcatggctaatctggaggactgc
actttgtcttatcagaagttactcgtgaagttcaacaccgcatacacaaattatcaacat
gacttggaagaaattaaaatcaaactttcaaagttagggacttcggtttctgtgatggcc
aggattcctctgctcgaatgtttgacaagacacagttacagagagagcatcgagaagtcc
agttcgaccccggagaaggattcagatgagacagaagaagaaaaatccaccgactctgtg
ctctgcgctactcaaacccaggtggcctccaaatcgtcagcgtccttatctgcttcaggg
gcaggcacgtgtgagacagagggcgatcaggagacaagcgaaatgactgagagtggcggt
ttgagagctgcactgttggacgacaacactccagaactcgcctgccagtcttctttcaac
gtaacactattggactggatcaacgtgcaagacagacctaacgatgttgaatcggtagtc
aggaaatgctttgactccatcaaccggcttgaccctaggatcatccagcccttcctggca
gattgtcgtgacacaattgcaaagctcgataatcagaacatgaaatccatcaaagggctt
gaagacaggctgtacgctctagaccaaatgattgcaagctgtaagaagctggtgaatgag
cagaaagaacttgctcaggggtttttggccaatcagaagcgagctgaaaacctaaaggat
acgtccgtcctgcctgacctgtgtctgagtcacaccaaccagctgatgatcatgctgaac
aaccacaggaagctgctagacattaaaaagaagtgcaccactgccaaacaagagctagca
aacaaccttcaagtcagactcaaatggtgctgctacgtgatgcttcacgcagatcaggat
ggggagaagcttcaggctcttcttcggctcctgacagagctgatagagagagtgagggtg
gtggacgccctcagtacggtgccccagatgtactgcttggcagtggtggaagttgtcagg
aggaaaatgtttatgcgacactacagagagtgggccaatgcacttgttaaggacggaaag
cgactgtatgaggcggaaaagttcaaaagggaatcttttggaaaactcttcaggaagtct
tttctccgaaatcgattgtttagaggacttgagtcttggcctccaacttcattttgtaca
cggaaacccagaaagtttgatgatgaacttccagacatctcacttgatgacctgcagtac
ttgaaatcgtgttgtcctgttgaggtgcagcctttcctaatgattcccgccatgtgtgac
tttgagcccctaaatcgccacgtagagacacttcataagctggtccaagccgcacagagc
gtggacgaaatgtctcaaactatcacagacctgctgagtgaacaaagagcatcctgtagt
cagagcgcccaaagatcaacggcacaaactccgcagtctgagggcaagcccaggaccacc
acgccggtgccctccaaaacgcctctctgtcttagccttcagggatccagctgtcagccc
ctgcttgtacccgtcccggctcctttagaggatctgtccccagacagtatcgatgcacaa
acatttgacttcgaaaccatcggccacccgaacatggaccccgtcctgcagcagggatcc
ctggacttggattctctcgccgaaagccccgaatccgacttcatgtctgctgtcaacgag
tttgtgatcgaggagaacctgacctcccctaaccccatcagtgaccccattagccctgaa
atgatggtggagtcgctgtactcctcagtcattaacgccatcgacagcaagcggatgcag
gacaccacaacgctggagaaggaaaactcaaggatcgccgacctcaaggaagttctagag
aaatacagatgtgccgcggaagagtcccactccaacctcaggagtgtgaaggctgacctc
tattacttaagaggttttgtcttgaaggaacagcaggactttgggttagctctgcgcagc
atgaccatggaagtgcgcagtaccgtgaacgaaatctaccagtgtcacaagacggagttg
aacgagcagcatgaaggggagcttctcaccgctcggcaggagctggagaagcaggttcag
gcattgacggaagaaaaccaagtaaaccagaatattgtcagagacgtccagcgagcgatg
ctggagctggaggggctcatggagcgcaaagagaaagaacttacccagctggagaacgag
aaagagcgatgggtggaaaaagagagaaactttgctgaaaagataaaacattttgagcag
atcaactgtgatcaaacagaagaaatcaagacactcctaacttcaaaagactctttgagc
agtcagcttgaaaacctgcattttgagatcgaacgcagtcagcagaagatccgacaggag
ctggaggcggtttctcagtgccatttaaaagagttggaggaaaaactgaagcaggagcac
caaaaggctctggatagtctgaataagaacaacaaggaagccctagaacatcttgctgtt
gaaaatagtacaaagctgaccaaggcagcagatcaccacgacaccgctattaaagagaag
gatgttcagattaaagaaatggaagatcggcttacggagctcacagaactccgctgtaga
ctggaggtagacctggccctcaaagagtccgagacagaagaggtgaggatcttatttgaa
gaagccaagatgcagcaggcggaagctgtaaagacccaagtggaggcagactccaaagtc
cttaaagatgagctgatggatctcaagaggcagcttcaagctaagaacgaggagtacgaa
gtggatctggcagagctgaggactctcatgaggatcgaaaaggaccactgcatctcggag
ctggtggaccggcacgaggagcagacgatcctgttgcacggcaaaatctccgccctgcag
cagcactcccaggatgcggagagaaaccacgcggagcagcagcagaggctcagagaggag
ttggatcagcagcgggcggctctggctgaagacaaggagaagcagttcaggagtttccag
gagcgggagcagcagttgaggacagttgtcaacagtgtgcaggcagaaaatgatttgctc
tctaaaaacctagagcaggaaagacgtgcagctcaggaggaggaggcctcaagcgtcgta
gcagcaaatgcttttaaggagttagagcagcagaaggaggagacggagaggagactttta
gaaaagattaggcaacttgagaatgagcttcatgagaaacggtcgtctaaaagtgatgaa
ggcttgtcgctgcatgctgagggccgtgcagatgctggagcacctctgtcactagactca
gccttacaggagcgcctgcagcaggagacggcctccctgcaggcccagattgagctcttg
gagaagaagaagaatgaagagatacagaacctcaaaacgtcactgattgcagagcagcag
acgaacttcaacactgttctaacaagagagaaattgaagaaagagcagattatcaacgac
ctttcggagaagttacaaaacgttacccagcagcaggaaaaagacaaagctctgatagag
acgctgtctgaggaccgagcgagtgtgatgcaggagaaaaagcaattggaggaagagctg
aaccgtctgcgcagctctgctctggtctcctcggccttcttcccctcgaactcggctcaa
gagctctcagaagctggagcagcagcgagggctctgcctgttgcgggggcttgctctcct
gagacctcggccgaaacggaccgactggcctccgtaacggccttcagagatgacgagcac
gtcgattcagccgtggaagccagcatggtggcttctgatgacaccgtgatgtcagaagag
aaacagcggataatgttacttgagaggactttgcacatgaaggaagaagaaaacaagcgc
ctcagccagcgactgatgtctcaaagcatgtcctccgtatcatcacggcattcagacaaa
attgccatcagagatttccaggtcggcgatttggttctaatcatcctggatgaaaggcac
gacaactacgtgctgttcacagttggtcccaccctctacttcctgcactcagagtctctc
actgcactggaccttaaaccagcatcagggacctcaagacggccatgggtgcttggaaaa
gtgatggagaaggaatattgtcaggcaaagaaggcccagaacagattcaaagttccttta
ggaaccaagttctacagagtgaaagctgttccatggaatagaaaagtctaa
DBGET
integrated database retrieval system
